Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ZMT
DownloadVisualize
BU of 6zmt by Molmil
SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-03
公開日2020-08-19
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6ZME
DownloadVisualize
BU of 6zme by Molmil
SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-02
公開日2020-08-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6ZLW
DownloadVisualize
BU of 6zlw by Molmil
SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunit
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-01
公開日2020-07-29
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6ZON
DownloadVisualize
BU of 6zon by Molmil
SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-07
公開日2020-07-29
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6ZN5
DownloadVisualize
BU of 6zn5 by Molmil
SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-06
公開日2020-07-29
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6ZP4
DownloadVisualize
BU of 6zp4 by Molmil
SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-08
公開日2020-07-29
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
6H58
DownloadVisualize
BU of 6h58 by Molmil
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, D.N.
登録日2018-07-24
公開日2018-09-05
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1.
Nat Microbiol, 3, 2018
3IZQ
DownloadVisualize
BU of 3izq by Molmil
Structure of the Dom34-Hbs1-GDPNP complex bound to a translating ribosome
分子名称: Elongation factor 1 alpha-like protein, Protein DOM34
著者Becker, T, Armache, J.-P, Jarasch, A, Anger, A.M, Villa, E, Sieber, H, Abdel Motaal, B, Mielke, T, Berninghausen, O, Beckmann, R.
登録日2010-11-30
公開日2011-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.
Nat.Struct.Mol.Biol., 18, 2011
6H4N
DownloadVisualize
BU of 6h4n by Molmil
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, N.D.
登録日2018-07-22
公開日2018-09-05
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1.
Nat Microbiol, 3, 2018
3J9W
DownloadVisualize
BU of 3j9w by Molmil
Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein bS16, ...
著者Sohmen, D, Chiba, S, Shimokawa-Chiba, N, Innis, C.A, Berninghausen, O, Beckmann, R, Ito, K, Wilson, D.N.
登録日2015-03-16
公開日2015-04-29
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling.
Nat Commun, 6, 2015
3J9Y
DownloadVisualize
BU of 3j9y by Molmil
Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Arenz, S, Nguyen, F, Beckmann, R, Wilson, D.N.
登録日2015-03-23
公開日2015-04-15
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of the tetracycline resistance protein TetM in complex with a translating ribosome at 3.9- angstrom resolution.
Proc.Natl.Acad.Sci.USA, 112, 2015
3J2I
DownloadVisualize
BU of 3j2i by Molmil
Structure of late pre-60S ribosomal subunits with nuclear export factor Arx1 bound at the peptide exit tunnel
分子名称: Eukaryotic translation initiation factor 6, Proliferation-associated protein 2G4
著者Bradatsch, B, Leidig, C, Granneman, S, Gnaedig, M, Tollervey, D, Boettcher, B, Beckmann, R, Hurt, E.
登録日2012-10-04
公開日2012-11-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.9 Å)
主引用文献Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Nat.Struct.Mol.Biol., 19, 2012
3J7Z
DownloadVisualize
BU of 3j7z by Molmil
Structure of the E. coli 50S subunit with ErmCL nascent chain
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Arenz, S, Meydan, S, Starosta, A.L, Berninghausen, O, Beckmann, R, Vazquez-Laslop, N, Wilson, D.N.
登録日2014-08-27
公開日2014-10-22
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Drug Sensing by the Ribosome Induces Translational Arrest via Active Site Perturbation.
Mol.Cell, 56, 2014
6HD7
DownloadVisualize
BU of 6hd7 by Molmil
Cryo-EM structure of the ribosome-NatA complex
分子名称: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 5.8S rRNA, 5S rRNA, ...
著者Knorr, A.G, Becker, T, Beckmann, R.
登録日2018-08-17
公開日2018-12-19
最終更新日2019-01-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
3J5L
DownloadVisualize
BU of 3j5l by Molmil
Structure of the E. coli 50S subunit with ErmBL nascent chain
分子名称: 23S ribsomal RNA, 5'-R(*CP*(MA6))-3', 5'-R(*CP*CP*A)-3', ...
著者Arenz, S, Ramu, H, Gupta, P, Berninghausen, O, Beckmann, R, Vazquez-Laslop, N, Mankin, A.S, Wilson, D.N.
登録日2013-10-23
公開日2014-03-26
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Molecular basis for erythromycin-dependent ribosome stalling during translation of the ErmBL leader peptide.
Nat Commun, 5, 2014
3J25
DownloadVisualize
BU of 3j25 by Molmil
Structural basis for TetM-mediated tetracycline resistance
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Tetracycline resistance protein tetM
著者Doenhoefer, A, Franckenberg, S, Wickles, S, Berninghausen, O, Beckmann, R, Wilson, D.N.
登録日2012-08-22
公開日2012-10-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structural basis for TetM-mediated tetracycline resistance.
Proc.Natl.Acad.Sci.USA, 109, 2012
6HD5
DownloadVisualize
BU of 6hd5 by Molmil
Cryo-EM structure of the ribosome-NatA complex
分子名称: N-alpha-acetyltransferase NAT5, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1
著者Knorr, A.G, Becker, T, Beckmann, R.
登録日2018-08-17
公開日2018-12-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Ribosome-NatA architecture reveals that rRNA expansion segments coordinate N-terminal acetylation.
Nat. Struct. Mol. Biol., 26, 2019
6I7O
DownloadVisualize
BU of 6i7o by Molmil
The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Tesina, P, Cheng, J, Becker, T, Beckmann, R.
登録日2018-11-16
公開日2019-01-16
最終更新日2019-03-13
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways.
EMBO J., 38, 2019
6ZVI
DownloadVisualize
BU of 6zvi by Molmil
Mbf1-ribosome complex
分子名称: 18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ...
著者Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
登録日2020-07-24
公開日2020-09-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
6ZVH
DownloadVisualize
BU of 6zvh by Molmil
EDF1-ribosome complex
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
登録日2020-07-24
公開日2020-08-19
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
6SH3
DownloadVisualize
BU of 6sh3 by Molmil
Structure of the ADP state of the heptameric Bcs1 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Mitochondrial chaperone BCS1
著者Kater, L, Beckmann, R.
登録日2019-08-05
公開日2020-02-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the Bcs1 AAA-ATPase suggests an airlock-like translocation mechanism for folded proteins.
Nat.Struct.Mol.Biol., 27, 2020
6SH4
DownloadVisualize
BU of 6sh4 by Molmil
Structure of the Apo1 state of the heptameric Bcs1 AAA-ATPase.
分子名称: Mitochondrial chaperone BCS1
著者Kater, L, Beckmann, R.
登録日2019-08-05
公開日2020-02-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of the Bcs1 AAA-ATPase suggests an airlock-like translocation mechanism for folded proteins.
Nat.Struct.Mol.Biol., 27, 2020
6SH5
DownloadVisualize
BU of 6sh5 by Molmil
Structure of the Apo2 state of the heptameric Bcs1 AAA-ATPase
分子名称: Mitochondrial chaperone BCS1
著者Kater, L, Beckmann, R.
登録日2019-08-05
公開日2020-02-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structure of the Bcs1 AAA-ATPase suggests an airlock-like translocation mechanism for folded proteins.
Nat.Struct.Mol.Biol., 27, 2020
7Z20
DownloadVisualize
BU of 7z20 by Molmil
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Mitropoulou, A, Plessa, E, Wlodarski, T, Ahn, M, Sidhu, H, Becker, T.A, Beckmann, R, Cabrita, L.D, Christodoulou, J.
登録日2022-02-25
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (2.29 Å)
主引用文献Modulating co-translational protein folding by rational design and ribosome engineering.
Nat Commun, 13, 2022
7ZQ6
DownloadVisualize
BU of 7zq6 by Molmil
70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Mitropoulou, A, Wlodarski, T, Ahn, M, Becker, T.A, Beckmann, R, Cabrita, L.D, Christodoulou, J.
登録日2022-04-29
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Modulating co-translational protein folding by rational design and ribosome engineering.
Nat Commun, 13, 2022

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon