Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YMG
DownloadVisualize
BU of 1ymg by Molmil
The Channel Architecture of Aquaporin O at 2.2 Angstrom Resolution
分子名称: Lens fiber major intrinsic protein, nonyl beta-D-glucopyranoside
著者Harries, W.E.C, Akhavan, D, Miercke, L.J.W, Khademi, S, Stroud, R.M.
登録日2005-01-20
公開日2005-02-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献The Channel Architecture of Aquaporin 0 at a 2.2-A Resolution
Proc.Natl.Acad.Sci.USA, 101, 2004
1NM2
DownloadVisualize
BU of 1nm2 by Molmil
Malonyl-CoA:ACP Transacylase
分子名称: ACETIC ACID, NICKEL (II) ION, malonyl CoA:acyl carrier protein malonyltransferase
著者Keatinge-Clay, A.T, Shelat, A.A, Savage, D.F, Tsai, S, Miercke, L.J.W, O'Connell III, J.D, Khosla, C, Stroud, R.M.
登録日2003-01-08
公開日2003-01-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Catalysis, Specificity, and ACP Docking Site of Streptomyces coelicolor Malonyl-CoA:ACP Transacylase
Structure, 11, 2003
1XUJ
DownloadVisualize
BU of 1xuj by Molmil
TRYPSIN-KETO-BABIM-ZN+2, PH 8.2
分子名称: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANONE ZINC, CALCIUM ION, SULFATE ION, ...
著者Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
登録日1997-10-10
公開日1998-11-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998
1Y4C
DownloadVisualize
BU of 1y4c by Molmil
Designed Helical Protein fusion MBP
分子名称: Maltose binding protein fused with designed helical protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者LaPorte, S.L, Forsyth, C.M, Cunningham, B.C, Miercke, L.J, Akhavan, D, Stroud, R.M.
登録日2004-11-30
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献De novo design of an IL-4 antagonist and its structure at 1.9 A.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2A9W
DownloadVisualize
BU of 2a9w by Molmil
E. coli TS complexed with dUMP and inhibitor GA9
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-BROMOPHENOL, 3,3-BIS(3-BROMO-4-HYDROXYPHENYL)-7-CHLORO-1H,3H-BENZO[DE]ISOCHROMEN-1-ONE, ...
著者Finer-Moore, J.S, Anderson, A.C, O'Neil, R.H, Costi, M.P, Ferrari, S, Krucinski, J, Stroud, R.M.
登録日2005-07-12
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structure of Cryptococcus neoformans thymidylate synthase suggests strategies for using target dynamics for species-specific inhibition.
Acta Crystallogr.,Sect.D, 61, 2005
1QZF
DownloadVisualize
BU of 1qzf by Molmil
Crystal structure of DHFR-TS from Cryptosporidium hominis
分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FOLIC ACID, ...
著者O'Neil, R.H, Lilien, R.H, Donald, B.R, Stroud, R.M, Anderson, A.C.
登録日2003-09-16
公開日2003-11-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phylogenetic classification of protozoa based on the structure of the linker domain in the bifunctional enzyme, dihydrofolate reductase-thymidylate synthase
J.Biol.Chem., 278, 2003
1R3E
DownloadVisualize
BU of 1r3e by Molmil
Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit
分子名称: 5'-R(*CP*UP*GP*UP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3', 5'-R(*CP*UP*GP*UP*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3', tRNA pseudouridine synthase B
著者Pan, H, Agarwalla, S, Moustakas, D.T, Finer-Moore, J, Stroud, R.M.
登録日2003-10-01
公開日2003-11-04
最終更新日2018-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA Recognition Through a Combination of Rigid Docking and Induced Fit
Proc.Natl.Acad.Sci.USA, 100, 2003
4J6E
DownloadVisualize
BU of 4j6e by Molmil
Structure of LPXI D225A Mutant
分子名称: (2R,3R,4R,5S,6R)-2-{[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)-3-{[(3R)-3-hydroxytetradecanoyl]amino}tetrahydro-2H-pyran-4-yl (3R)-3-hydroxytetradecanoate, UDP-2,3-diacylglucosamine pyrophosphatase LpxI
著者Metzger IV, L.E, Lee, J.K, Finer-Moore, J.S, Raetz, C.R.H, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2013-02-11
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol., 19, 2012
4K1C
DownloadVisualize
BU of 4k1c by Molmil
VCX1 Calcium/Proton Exchanger
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, IODIDE ION, ...
著者Waight, A.B, Pedersen, B.P, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2013-04-04
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for alternating access of a eukaryotic calcium/proton exchanger.
Nature, 499, 2013
4K0E
DownloadVisualize
BU of 4k0e by Molmil
X-ray crystal structure of a heavy metal efflux pump, crystal form II
分子名称: Heavy metal cation tricomponent efflux pump ZneA(CzcA-like), ZINC ION
著者Pak, J.E, Ngonlong Ekende, E, Vandenbussche, G, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2013-04-03
公開日2013-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.713 Å)
主引用文献Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K0J
DownloadVisualize
BU of 4k0j by Molmil
X-ray crystal structure of a heavy metal efflux pump, crystal form I
分子名称: Heavy metal cation tricomponent efflux pump ZneA(CzcA-like), ZINC ION
著者Pak, J.E, Stroud, R.M, Ngonlong Ekende, E, Vandenbussche, G, Center for Structures of Membrane Proteins (CSMP)
登録日2013-04-04
公開日2013-10-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4LAB
DownloadVisualize
BU of 4lab by Molmil
Crystal structure of the catalytic domain of RluB
分子名称: CHLORIDE ION, PLATINUM (II) ION, Ribosomal large subunit pseudouridine synthase B
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-19
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5043 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
4LGT
DownloadVisualize
BU of 4lgt by Molmil
Crystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrate
分子名称: Ribosomal large subunit pseudouridine synthase B, stem-loop of 23S rRNA
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-28
公開日2013-11-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
4JEF
DownloadVisualize
BU of 4jef by Molmil
Crystal structure of human thymidylate synthase Y202A in inactive conformation.
分子名称: SULFATE ION, Thymidylate synthase
著者Tochowicz, A, Stroud, R.M, Wade, R.C.
登録日2013-02-26
公開日2014-08-20
最終更新日2015-05-06
実験手法X-RAY DIFFRACTION (2.311 Å)
主引用文献Hotspots in an obligate homodimeric anticancer target. Structural and functional effects of interfacial mutations in human thymidylate synthase.
J.Med.Chem., 58, 2015
4LYA
DownloadVisualize
BU of 4lya by Molmil
EssC (ATPases 2 and 3) from Geobacillus thermodenitrificans (SeMet)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Uncharacterized protein
著者Dovala, D.L, Bendebury, A, Cox, J.S, Stroud, R.M, Rosenberg, O.S.
登録日2013-07-30
公開日2015-02-04
最終更新日2016-09-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion.
Cell(Cambridge,Mass.), 161, 2015
4LWS
DownloadVisualize
BU of 4lws by Molmil
EsxA : EsxB (SeMet) hetero-dimer from Thermomonospora curvata
分子名称: ACETATE ION, GLYCEROL, Uncharacterized protein
著者Dovala, D.L, Cox, J.S, Stroud, R.M, Rosenberg, O.S.
登録日2013-07-28
公開日2015-02-04
最終更新日2016-09-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion.
Cell(Cambridge,Mass.), 161, 2015
4M8B
DownloadVisualize
BU of 4m8b by Molmil
Fungal Protein
分子名称: 1,2-ETHANEDIOL, Chain A of dsDNA containing the cis-regulatory element, Chain B of dsDNA containing the cis-regulatory element, ...
著者Rosenberg, O.S, Lohse, M.L, Stroud, R.M, Johnson, A.D.
登録日2013-08-13
公開日2014-06-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LXJ
DownloadVisualize
BU of 4lxj by Molmil
Saccharomyces cerevisiae lanosterol 14-alpha demethylase with lanosterol bound
分子名称: LANOSTEROL, Lanosterol 14-alpha demethylase, OXYGEN MOLECULE, ...
著者Monk, B.C, Tomasiak, T.M, Keniya, M.V, Huschmann, F.U, Tyndall, J.D.A, O'Connell III, J.D, Cannon, R.D, McDonald, J, Rodriguez, A, Finer-Moore, J, Stroud, R.M.
登録日2013-07-29
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Architecture of a single membrane spanning cytochrome P450 suggests constraints that orient the catalytic domain relative to a bilayer.
Proc.Natl.Acad.Sci.USA, 111, 2014
4IQM
DownloadVisualize
BU of 4iqm by Molmil
Crystal structure of the catalytic domain of human Pus1
分子名称: tRNA pseudouridine synthase A, mitochondrial
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-01-11
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities.
J.Mol.Biol., 425, 2013
4J37
DownloadVisualize
BU of 4j37 by Molmil
Crystal structure of the catalytic domain of human Pus1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-02-05
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献In Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target Selectivities.
J.Mol.Biol., 425, 2013
5CD1
DownloadVisualize
BU of 5cd1 by Molmil
Structure of an asymmetric tetramer of human tRNA m1A58 methyltransferase in a complex with SAH and tRNA3Lys
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, ...
著者Finer-Moore, J, Czudnochowski, N, O'Connell III, J.D, Wang, A.L, Stroud, R.M.
登録日2015-07-02
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA3(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target.
J.Mol.Biol., 427, 2015
5CCX
DownloadVisualize
BU of 5ccx by Molmil
Structure of the product complex of tRNA m1A58 methyltransferase with tRNA3Lys as substrate
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, ...
著者Finer-Moore, J, Czudnochowski, N, O'Connell III, J.D, Wang, A.L, Stroud, R.M.
登録日2015-07-02
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA3(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target.
J.Mol.Biol., 427, 2015
5CCB
DownloadVisualize
BU of 5ccb by Molmil
Crystal structure of human m1A58 methyltransferase in a complex with tRNA3Lys and SAH
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, ...
著者Finer-Moore, J, Czudnochowski, N, O'Connell III, J.D, Wang, A.L, Stroud, R.M.
登録日2015-07-01
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA3(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target.
J.Mol.Biol., 427, 2015
1JUJ
DownloadVisualize
BU of 1juj by Molmil
Human Thymidylate Synthase Bound to dUMP and LY231514, a Pyrrolo(2,3-d)pyrimidine-based Antifolate
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, THYMIDYLATE SYNTHASE
著者Sayre, P.H, Finer-Moore, J.S, Fritz, T.A, Biermann, D, Gates, S.B, MacKellar, W.C, Patel, V.F, Stroud, R.M.
登録日2001-08-24
公開日2001-09-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Multi-targeted antifolates aimed at avoiding drug resistance form covalent closed inhibitory complexes with human and Escherichia coli thymidylate synthases.
J.Mol.Biol., 313, 2001
1JU6
DownloadVisualize
BU of 1ju6 by Molmil
Human Thymidylate Synthase Complex with dUMP and LY231514, A Pyrrolo(2,3-d)pyrimidine-based Antifolate
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, PHOSPHATE ION, ...
著者Sayre, P.H, Finer-Moore, J.S, Fritz, T.A, Biermann, D, Gates, S.B, MacKellar, W.C, Patel, V.F, Stroud, R.M.
登録日2001-08-23
公開日2001-09-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Multi-targeted antifolates aimed at avoiding drug resistance form covalent closed inhibitory complexes with human and Escherichia coli thymidylate synthases.
J.Mol.Biol., 313, 2001

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon