6KJI
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![BU of 6kji by Molmil](/molmil-images/mine/6kji) | Crystal structure of PsoF with SAH | 分子名称: | Dual-functional monooxygenase/methyltransferase psoF, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2019-07-22 | 公開日 | 2019-09-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Functional and Structural Analyses oftrans C-Methyltransferase in Fungal Polyketide Biosynthesis. Biochemistry, 58, 2019
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3VIR
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![BU of 3vir by Molmil](/molmil-images/mine/3vir) | Crystal strcture of Swi5 from fission yeast | 分子名称: | Mating-type switching protein swi5, octyl beta-D-glucopyranoside | 著者 | Kuwabara, N, Yamada, N, Hashimoto, H, Sato, M, Iwasaki, H, Shimizu, T. | 登録日 | 2011-10-06 | 公開日 | 2012-08-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex Structure, 20, 2012
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3VL8
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![BU of 3vl8 by Molmil](/molmil-images/mine/3vl8) | Crystal structure of XEG | 分子名称: | SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase A | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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3VIQ
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![BU of 3viq by Molmil](/molmil-images/mine/3viq) | Crystal structure of Swi5-Sfr1 complex from fission yeast | 分子名称: | GLYCEROL, Mating-type switching protein swi5, NITRATE ION, ... | 著者 | Kuwabara, N, Murayama, Y, Hashimoto, H, Kokabu, Y, Ikeguchi, M, Sato, M, Mayanagi, K, Tsutsui, Y, Iwasaki, H, Shimizu, T. | 登録日 | 2011-10-06 | 公開日 | 2012-08-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex Structure, 20, 2012
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3VL9
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![BU of 3vl9 by Molmil](/molmil-images/mine/3vl9) | Crystal structure of xeg-xyloglucan | 分子名称: | Xyloglucan-specific endo-beta-1,4-glucanase A, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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2RVQ
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![BU of 2rvq by Molmil](/molmil-images/mine/2rvq) | Solution structure of the isolated histone H2A-H2B heterodimer | 分子名称: | Histone H2A type 1-B/E, Histone H2B type 1-J | 著者 | Moriwaki, Y, Yamane, T, Ohtomo, H, Ikeguchi, M, Kurita, J, Sato, M, Nagadoi, A, Shimojo, H, Nishimura, Y. | 登録日 | 2016-03-28 | 公開日 | 2016-05-25 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the isolated histone H2A-H2B heterodimer Sci Rep, 6, 2016
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8Y2S
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![BU of 8y2s by Molmil](/molmil-images/mine/8y2s) | P-hydroxybenzoate hydroxylase complexed with 4-hydroxy-3-methylbenzoic acid | 分子名称: | 3-methyl-4-oxidanyl-benzoic acid, 4-hydroxybenzoate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE | 著者 | Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K. | 登録日 | 2024-01-27 | 公開日 | 2024-05-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Functional Enhancement of Flavin-Containing Monooxygenase through Machine Learning Methodology Acs Catalysis, 14, 2024
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2ZVK
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![BU of 2zvk by Molmil](/molmil-images/mine/2zvk) | Crystal structure of PCNA in complex with DNA polymerase eta fragment | 分子名称: | DNA polymerase eta, Proliferating cell nuclear antigen | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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3AUP
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![BU of 3aup by Molmil](/molmil-images/mine/3aup) | Crystal structure of Basic 7S globulin from soybean | 分子名称: | Basic 7S globulin | 著者 | Yoshizawa, T, Shimizu, T, Taichi, M, Nishiuchi, Y, Yamabe, M, Shichijo, N, Unzai, S, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-02-14 | 公開日 | 2011-04-27 | 最終更新日 | 2017-10-11 | 実験手法 | X-RAY DIFFRACTION (1.91 Å) | 主引用文献 | Crystal structure of basic 7S globulin, a xyloglucan-specific endo-beta-1,4-glucanase inhibitor protein-like protein from soybean lacking inhibitory activity against endo-beta-glucanase Febs J., 278, 2011
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2ZVM
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![BU of 2zvm by Molmil](/molmil-images/mine/2zvm) | Crystal structure of PCNA in complex with DNA polymerase iota fragment | 分子名称: | DNA polymerase iota, Proliferating cell nuclear antigen | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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2ZVL
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![BU of 2zvl by Molmil](/molmil-images/mine/2zvl) | Crystal structure of PCNA in complex with DNA polymerase kappa fragment | 分子名称: | DNA polymerase kappa, Proliferating cell nuclear antigen, SULFATE ION, ... | 著者 | Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. | 登録日 | 2008-11-11 | 公開日 | 2009-02-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009
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2ZFD
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![BU of 2zfd by Molmil](/molmil-images/mine/2zfd) | The crystal structure of plant specific calcium binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14 | 分子名称: | ACETIC ACID, CALCIUM ION, Calcineurin B-like protein 2, ... | 著者 | Akaboshi, M, Hashimoto, H, Ishida, H, Koizumi, N, Sato, M, Shimizu, T. | 登録日 | 2007-12-29 | 公開日 | 2008-02-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | The crystal structure of plant-specific calcium-binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14 J.Mol.Biol., 377, 2008
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4XZG
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![BU of 4xzg by Molmil](/molmil-images/mine/4xzg) | |
4XZF
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1WCY
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![BU of 1wcy by Molmil](/molmil-images/mine/1wcy) | Crystal Structure Of Human Dipeptidyl Peptidase IV (DPPIV) Complex With Diprotin A | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase IV, ... | 著者 | Hiramatsu, H, Yamamoto, A, Kyono, K, Higashiyama, Y, Fukushima, C, Shima, H, Sugiyama, S, Inaka, K, Shimizu, R. | 登録日 | 2004-05-07 | 公開日 | 2005-05-07 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | The crystal structure of human dipeptidyl peptidase IV (DPPIV) complex with diprotin A Biol.Chem., 385, 2004
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7YBD
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![BU of 7ybd by Molmil](/molmil-images/mine/7ybd) | Crystal structure of sliding DNA clamp of Clostridioides difficile | 分子名称: | Beta sliding clamp, TRIETHYLENE GLYCOL | 著者 | Hishiki, A, Okazaki, S, Hara, K, Hashimoto, H. | 登録日 | 2022-06-29 | 公開日 | 2022-10-19 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.13 Å) | 主引用文献 | Crystal structure of the sliding DNA clamp from the Gram-positive anaerobic bacterium Clostridioides difficile. J.Biochem., 173, 2022
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7Y9Y
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![BU of 7y9y by Molmil](/molmil-images/mine/7y9y) | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | 分子名称: | CHAT domain-containing protein, CRISPR-associated RAMP family protein, RNA (27-MER), ... | 著者 | Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H. | 登録日 | 2022-06-26 | 公開日 | 2022-11-09 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (2.77 Å) | 主引用文献 | RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease. Science, 378, 2022
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7Y9X
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![BU of 7y9x by Molmil](/molmil-images/mine/7y9x) | Structure of the Cas7-11-Csx29-guide RNA complex | 分子名称: | CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ... | 著者 | Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H. | 登録日 | 2022-06-26 | 公開日 | 2022-11-09 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (2.49 Å) | 主引用文献 | RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease. Science, 378, 2022
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5EGE
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![BU of 5ege by Molmil](/molmil-images/mine/5ege) | Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J. | 登録日 | 2015-10-27 | 公開日 | 2016-03-09 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase Sci Rep, 6, 2016
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5FHI
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![BU of 5fhi by Molmil](/molmil-images/mine/5fhi) | Crystallographic structure of PsoE without Co | 分子名称: | GLUTATHIONE, Glutathione S-transferase, putative | 著者 | Hara, K, Hashimoto, H, Yamamoto, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2015-12-22 | 公開日 | 2016-04-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.41 Å) | 主引用文献 | Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. Angew. Chem. Int. Ed. Engl., 55, 2016
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5F8B
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![BU of 5f8b by Molmil](/molmil-images/mine/5f8b) | Crystallographic Structure of PsoE with Co | 分子名称: | (5~{S},8~{S},9~{R})-2-[(~{E})-hex-1-enyl]-8-methoxy-3-methyl-9-oxidanyl-8-(phenylcarbonyl)-1-oxa-7-azaspiro[4.4]non-2-ene-4,6-dione, COBALT (II) ION, GLUTATHIONE, ... | 著者 | Hara, K, Hashimoto, H, Yamamoto, T, Tsunematsu, Y, Watanabe, K. | 登録日 | 2015-12-09 | 公開日 | 2016-04-20 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Oxidative trans to cis Isomerization of Olefins in Polyketide Biosynthesis. Angew. Chem. Int. Ed. Engl., 55, 2016
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5EGH
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![BU of 5egh by Molmil](/molmil-images/mine/5egh) | Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase in complex with phosphocholine | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Morita, J, Kano, K, Kato, K, Takita, H, Ishitani, R, Nishimasu, H, Nureki, O, Aoki, J. | 登録日 | 2015-10-27 | 公開日 | 2016-03-09 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.803 Å) | 主引用文献 | Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase Sci Rep, 6, 2016
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8YHR
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![BU of 8yhr by Molmil](/molmil-images/mine/8yhr) | DHODH in complex with furocoumavirin | 分子名称: | 4-methyl-8-[(S)-oxidanyl(phenyl)methyl]-9-phenyl-furo[2,3-h]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ... | 著者 | Hara, K, Okumura, H, Nakahara, M, Sato, M, Hashimoto, H, Osada, H, Watanabe, K. | 登録日 | 2024-02-28 | 公開日 | 2024-05-22 | 最終更新日 | 2024-06-05 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural and Functional Analyses of Inhibition of Human Dihydroorotate Dehydrogenase by Antiviral Furocoumavirin. Biochemistry, 63, 2024
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3VU7
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![BU of 3vu7 by Molmil](/molmil-images/mine/3vu7) | Crystal structure of REV1-REV7-REV3 ternary complex | 分子名称: | DNA polymerase zeta catalytic subunit, DNA repair protein REV1, Mitotic spindle assembly checkpoint protein MAD2B | 著者 | Kikuchi, S, Hara, K, Shimizu, T, Sato, M, Hashimoto, H. | 登録日 | 2012-06-20 | 公開日 | 2012-08-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structural basis of recruitment of DNA polymerase [zeta] by interaction between REV1 and REV7 proteins J.Biol.Chem., 287, 2012
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1V55
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![BU of 1v55 by Molmil](/molmil-images/mine/1v55) | Bovine heart cytochrome c oxidase at the fully reduced state | 分子名称: | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ... | 著者 | Tsukihara, T, Shimokata, K, Katayama, Y, Shimada, H, Muramoto, K, Aoyama, H, Mochizuki, M, Shinzawa-Itoh, K, Yamashita, E, Yao, M, Ishimura, Y, Yoshikawa, S. | 登録日 | 2003-11-21 | 公開日 | 2003-12-23 | 最終更新日 | 2023-12-20 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process. Proc.Natl.Acad.Sci.Usa, 100, 2003
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