Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DEH
DownloadVisualize
BU of 7deh by Molmil
Solution structure of cecropin P1 in dodecylphosphocholine micelles
分子名称: Cecropin-P1
著者Gu, H, Kumeta, H, Aizawa, T.
登録日2020-11-04
公開日2021-11-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues
Acs Omega, 7, 2022
2VJ2
DownloadVisualize
BU of 2vj2 by Molmil
Human Jagged-1, domains DSL and EGFs1-3
分子名称: D-MALATE, JAGGED-1
著者Johnson, S, Cordle, J, Tay, J.Z, Roversi, P, Handford, P.A, Lea, S.M.
登録日2007-12-06
公開日2008-07-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Conserved Face of the Jagged/Serrate Dsl Domain is Involved in Notch Trans-Activation and Cis-Inhibition.
Nat.Struct.Mol.Biol., 15, 2008
2PCK
DownloadVisualize
BU of 2pck by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
著者Yamamoto, H, Morikawa, Y, Matsuura, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P6I
DownloadVisualize
BU of 2p6i by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
著者Yamamoto, H, Matsuura, Y, Morikawa, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-18
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2VJ3
DownloadVisualize
BU of 2vj3 by Molmil
Human Notch-1 EGFs 11-13
分子名称: CALCIUM ION, CHLORIDE ION, NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1, ...
著者Johnson, S, Cordle, J, Tay, J.Z, Roversi, P, Lea, S.M.
登録日2007-12-06
公開日2008-07-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Conserved Face of the Jagged/Serrate Dsl Domain is Involved in Notch Trans-Activation and Cis-Inhibition.
Nat.Struct.Mol.Biol., 15, 2008
3WC6
DownloadVisualize
BU of 3wc6 by Molmil
Carboxypeptidase B in complex with 2nd zinc
分子名称: ACETATE ION, Carboxypeptidase B, ZINC ION
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
5WIR
DownloadVisualize
BU of 5wir by Molmil
Structure of the TRF1-TERB1 interface
分子名称: TERB1-TBM, Telomeric repeat-binding factor 1
著者Nandakumar, J, Pendlebury, D.F, Smith, E.M, Tesmer, V.M.
登録日2017-07-20
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017
2P6L
DownloadVisualize
BU of 2p6l by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
著者Yamamoto, H, Matsuura, Y, Ono, N, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-19
公開日2007-09-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
1RLS
DownloadVisualize
BU of 1rls by Molmil
CRYSTAL STRUCTURE OF RNASE T1 COMPLEXED WITH THE PRODUCT NUCLEOTIDE 3'-GMP. STRUCTURAL EVIDENCE FOR DIRECT INTERACTION OF HISTIDINE 40 AND GLUTAMIC ACID 58 WITH THE 2'-HYDROXYL GROUP OF RIBOSE
分子名称: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE T1
著者Gohda, K, Oka, K.-I, Tomita, K.-I, Hakoshima, T.
登録日1994-03-29
公開日1994-12-20
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of RNase T1 complexed with the product nucleotide 3'-GMP. Structural evidence for direct interaction of histidine 40 and glutamic acid 58 with the 2'-hydroxyl group of the ribose.
J.Biol.Chem., 269, 1994
3WIA
DownloadVisualize
BU of 3wia by Molmil
Crystal structure of the N-terminal 1-37 residues deleted mutant of Geobacillus copper nitrite reductase
分子名称: COPPER (II) ION, FORMIC ACID, Nitrite reductase
著者Fukuda, Y, Nojiri, M.
登録日2013-09-09
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and functional characterization of the Geobacillus copper nitrite reductase: involvement of the unique N-terminal region in the interprotein electron transfer with its redox partner
Biochim.Biophys.Acta, 1837, 2014
3WI9
DownloadVisualize
BU of 3wi9 by Molmil
Crystal structure of copper nitrite reductase from Geobacillus kaustophilus
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, COPPER (II) ION, ...
著者Fukuda, Y, Nojiri, M.
登録日2013-09-09
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural and functional characterization of the Geobacillus copper nitrite reductase: involvement of the unique N-terminal region in the interprotein electron transfer with its redox partner
Biochim.Biophys.Acta, 1837, 2014
7CAO
DownloadVisualize
BU of 7cao by Molmil
Crystal structure of red chromoprotein from Olindias formosa
分子名称: Chromoprotein
著者Nakashima, R, Zhai, L, Ike, Y, Matsudz, T, Nagai, T.
登録日2020-06-09
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure-based analysis and evolution of a monomerized red-colored chromoprotein from the Olindias formosa jellyfish.
Protein Sci., 31, 2022
7DCF
DownloadVisualize
BU of 7dcf by Molmil
Crystal structure of EHMT2 SET domain in complex with compound 10
分子名称: 5'-methoxy-6'-(1-methyl-2,3,4,7-tetrahydroazepin-5-yl)spiro[cyclobutane-1,3'-indole]-2'-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
著者Suzuki, M, Katayama, K.
登録日2020-10-26
公開日2021-02-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of DS79932728: A Potent, Orally Available G9a/GLP Inhibitor for Treating beta-Thalassemia and Sickle Cell Disease.
Acs Med.Chem.Lett., 12, 2021
2I3H
DownloadVisualize
BU of 2i3h by Molmil
Structure of an ML-IAP/XIAP chimera bound to a 4-mer peptide (AVPW)
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AVPW peptide, ...
著者Fairbrother, W.J, Franklin, M.C.
登録日2006-08-18
公開日2006-09-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Design, synthesis, and biological activity of a potent Smac mimetic that sensitizes cancer cells to apoptosis by antagonizing IAPs.
Acs Chem.Biol., 1, 2006
2I3I
DownloadVisualize
BU of 2i3i by Molmil
Structure of an ML-IAP/XIAP chimera bound to a peptidomimetic
分子名称: (3R,6R,9AR)-2,2-DIMETHYL-6-[(N-METHYL-L-ALANYL)AMINO]-N-(3-METHYL-1-PHENYL-1H-PYRAZOL-5-YL)-5-OXO-2,3,5,6,9,9A-HEXAHYDRO[1,3]THIAZOLO[3,2-A]AZEPINE-3-CARBOXAMIDE, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Fairbrother, W.J, Franklin, M.C.
登録日2006-08-18
公開日2006-09-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design, synthesis, and biological activity of a potent Smac mimetic that sensitizes cancer cells to apoptosis by antagonizing IAPs.
Acs Chem.Biol., 1, 2006
5ZO9
DownloadVisualize
BU of 5zo9 by Molmil
Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (C2 type)
分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
著者Yokoyama, H, Sato, K.
登録日2018-04-12
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors.
Acs Omega, 3, 2018
5ZO8
DownloadVisualize
BU of 5zo8 by Molmil
Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (P21 type)
分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ...
著者Yokoyama, H, Sato, K.
登録日2018-04-12
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors.
Acs Omega, 3, 2018
7WKZ
DownloadVisualize
BU of 7wkz by Molmil
Crystal structure of the HSA complex with mycophenolate and aripiprazole
分子名称: 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one, MYCOPHENOLIC ACID, Serum albumin
著者Kawai, A, Yamasaki, K.
登録日2022-01-12
公開日2022-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.992 Å)
主引用文献Structural Basis of the Change in the Interaction Between Mycophenolic Acid and Subdomain IIA of Human Serum Albumin During Renal Failure.
J.Med.Chem., 66, 2023
5B1J
DownloadVisualize
BU of 5b1j by Molmil
Crystal structure of the electron-transfer complex of copper nitrite reductase with a cupredoxin
分子名称: Blue copper protein, COPPER (II) ION, Copper-containing nitrite reductase
著者Nojiri, M, Koteishi, H, Yoneda, R, Hira, D.
登録日2015-12-04
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and Function of Copper Nitrite Reductase
Metalloenzymes in denitrification: Applications and Environmental impacts, 2016
5XDF
DownloadVisualize
BU of 5xdf by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE
分子名称: FORMIC ACID, Homoserine dehydrogenase, L-HOMOSERINE, ...
著者Akai, S, Miyahara, I.
登録日2017-03-28
公開日2017-04-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic study of homoserine dehydrogenase from Thermus thermophilus HB8
To Be Published
4M9E
DownloadVisualize
BU of 4m9e by Molmil
Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
分子名称: ACETATE ION, DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3'), ...
著者Liu, Y, Olanrewaju, Y.O, Blumenthal, R.M, Zhang, X, Cheng, X.
登録日2013-08-14
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Structural basis for Klf4 recognition of methylated DNA.
Nucleic Acids Res., 42, 2014
5Z5E
DownloadVisualize
BU of 5z5e by Molmil
Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
分子名称: GLYCEROL, NEQ417, SULFATE ION
著者Noguchi, H, Park, S.Y, Tamura, K.
登録日2018-01-18
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation.
Biochem.Biophys.Res.Commun., 511, 2019
5Z7Y
DownloadVisualize
BU of 5z7y by Molmil
Crystal structure of Striga hermonthica HTL7 (ShHTL7)
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Hyposensitive to light 7, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2018-01-30
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
5Z7Z
DownloadVisualize
BU of 5z7z by Molmil
Crystal structure of Striga hermonthica Dwarf14 (ShD14)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dwarf 14, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2018-01-30
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.978 Å)
主引用文献Structural analysis of HTL and D14 proteins reveals the basis for ligand selectivity in Striga.
Nat Commun, 9, 2018
4K2Y
DownloadVisualize
BU of 4k2y by Molmil
Crystal Structure of Human Chymase in Complex with Fragment Inhibitor 6-chloro-1,3-dihydro-2H-indol-2-one
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-chloro-1,3-dihydro-2H-indol-2-one, Chymase, ...
著者Collins, B.K, Padyana, A.K.
登録日2013-04-09
公開日2013-05-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of Potent, Selective Chymase Inhibitors via Fragment Linking Strategies.
J.Med.Chem., 56, 2013

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon