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1U7D
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BU of 1u7d by Molmil
crystal structure of apo M. jannashii tyrosyl-tRNA synthetase
分子名称: Tyrosyl-tRNA synthetase
著者Zhang, Y, Wang, L, Schultz, P.G, Wilson, I.A.
登録日2004-08-03
公開日2005-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structures of apo wild-type M. jannaschii tyrosyl-tRNA synthetase (TyrRS) and an engineered TyrRS specific for O-methyl-L-tyrosine.
Protein Sci., 14, 2005
1TYY
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BU of 1tyy by Molmil
Crystal structure of aminoimidazole riboside kinase from Salmonella enterica
分子名称: POTASSIUM ION, putative sugar kinase
著者Zhang, Y, Dougherty, M, Downs, D.M, Ealick, S.E.
登録日2004-07-08
公開日2004-10-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily
STRUCTURE, 12, 2004
3LC8
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BU of 3lc8 by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-free form)
分子名称: GLYCEROL, MAGNESIUM ION, Maltose-binding periplasmic protein, ...
著者Zhang, Y, Garavito, R.M.
登録日2010-01-10
公開日2011-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
7K65
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BU of 7k65 by Molmil
Hedgehog receptor Patched (PTCH1) in complex with conformation selective nanobody TI23
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
著者Zhang, Y, Bulkley, D.P, Liang, J, Manglik, A, Cheng, Y, Beachy, P.A.
登録日2020-09-18
公開日2021-03-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Hedgehog pathway activation through nanobody-mediated conformational blockade of the Patched sterol conduit.
Proc.Natl.Acad.Sci.USA, 117, 2020
3LBS
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BU of 3lbs by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form)
分子名称: Maltose-binding periplasmic protein, Renin receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Zhang, Y, Garavito, R.M.
登録日2010-01-08
公開日2011-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
6M0V
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BU of 6m0v by Molmil
Crsytal structure of streptococcus thermophilus Cas9 in complex with the GGAA PAM
分子名称: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
著者Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
登録日2020-02-22
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
6B40
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BU of 6b40 by Molmil
BbRAGL-3'TIR synaptic complex with nicked DNA refined with C2 symmetry
分子名称: 31TIR intact strand, 31TIR pre-nicked strand of flanking DNA, 31TIR pre-nicked strand of signal DNA, ...
著者Zhang, Y, Cheng, T.C, Xiong, Y, Schatz, D.G.
登録日2017-09-25
公開日2019-03-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Transposon molecular domestication and the evolution of the RAG recombinase.
Nature, 569, 2019
4Z69
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BU of 4z69 by Molmil
Human serum albumin complexed with palmitic acid and diclofenac
分子名称: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, PALMITIC ACID, PENTADECANOIC ACID, ...
著者Zhang, Y, Yang, F.
登録日2015-04-04
公開日2016-01-27
実験手法X-RAY DIFFRACTION (2.187 Å)
主引用文献Structural basis of non-steroidal anti-inflammatory drug diclofenac binding to human serum albumin.
Chem.Biol.Drug Des., 86, 2015
6M0X
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BU of 6m0x by Molmil
Crystal structure of Streptococcus thermophilus Cas9 in complex with AGGA PAM
分子名称: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
著者Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
登録日2020-02-23
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.561 Å)
主引用文献Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
6M0W
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BU of 6m0w by Molmil
Crystal structure of Streptococcus thermophilus Cas9 in complex with the AGAA PAM
分子名称: CRISPR-associated endonuclease Cas9 1, DNA (28-MER), DNA (5'-D(*AP*AP*AP*GP*AP*AP*GP*C)-3'), ...
著者Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
登録日2020-02-23
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
1TZ6
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BU of 1tz6 by Molmil
Crystal structure of aminoimidazole riboside kinase from Salmonella enterica complexed with aminoimidazole riboside and ATP analog
分子名称: 5-AMINOIMIDAZOLE RIBONUCLEOSIDE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Zhang, Y, Dougherty, M, Downs, D.M, Ealick, S.E.
登録日2004-07-09
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily
STRUCTURE, 12, 2004
1U7X
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BU of 1u7x by Molmil
crystal structure of a mutant M. jannashii tyrosyl-tRNA synthetase specific for O-methyl-tyrosine
分子名称: POTASSIUM ION, Tyrosyl-tRNA synthetase
著者Zhang, Y, Wang, L, Schultz, P.G, Wilson, I.A.
登録日2004-08-04
公開日2005-05-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of apo wild-type M. jannaschii tyrosyl-tRNA synthetase (TyrRS) and an engineered TyrRS specific for O-methyl-L-tyrosine.
Protein Sci., 14, 2005
3LZC
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BU of 3lzc by Molmil
Crystal structure of Dph2 from Pyrococcus horikoshii
分子名称: Dph2
著者Zhang, Y, Zhu, X, Torelli, A.T, Lee, M, Dzikovski, B, Koralewski, R.M, Wang, E, Freed, J, Krebs, C, Lin, H, Ealick, S.E.
登録日2010-03-01
公開日2010-06-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
Nature, 465, 2010
5T0X
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BU of 5t0x by Molmil
Solution NMR-derived structure of calmodulin bound with ER alpha peptides
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor peptide
著者Zhang, Y, Ames, J.B.
登録日2016-08-16
公開日2017-02-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR-derived structure of calmodulin bound with ER alpha peptides
To Be Published
5VAI
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BU of 5vai by Molmil
Cryo-EM structure of the activated Glucagon-like peptide-1 receptor in complex with G protein
分子名称: Glucagon-like peptide 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Zhang, Y, Sun, B, Feng, D, Hu, H, Chu, M, Qu, Q, Tarrasch, J.T, Li, S, Kobilka, T.S, Kobilka, B.K, Skiniotis, G.
登録日2017-03-27
公開日2017-05-24
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of the activated GLP-1 receptor in complex with a G protein.
Nature, 546, 2017
5V22
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BU of 5v22 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAH
分子名称: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Zhang, Y, Tong, L.
登録日2017-03-02
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
5UQ8
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BU of 5uq8 by Molmil
70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ("out" conformation)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M.
登録日2017-02-07
公開日2018-03-07
最終更新日2018-03-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
Structure, 26, 2018
5V21
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BU of 5v21 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAM
分子名称: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYLMETHIONINE, ...
著者Zhang, Y, Tong, L.
登録日2017-03-02
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.415 Å)
主引用文献Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017
5UQ7
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BU of 5uq7 by Molmil
70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ("in" conformation)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M.
登録日2017-02-07
公開日2018-03-07
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
Structure, 26, 2018
2LD5
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BU of 2ld5 by Molmil
Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
分子名称: DNA (5'-D(*CP*AP*AP*AP*TP*AP*AP*AP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*TP*AP*TP*TP*TP*G)-3'), Homeobox protein Hox-A13
著者Zhang, Y.
登録日2011-05-14
公開日2011-08-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
2LLO
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BU of 2llo by Molmil
Solution NMR-derived structure of calmodulin N-lobe bound with ER alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2LLQ
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BU of 2llq by Molmil
Solution nmr-derived structure of calmodulin c-lobe bound with er alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2LRJ
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BU of 2lrj by Molmil
NMR solution structure of staphyloxanthin biosynthesis protein
分子名称: Staphyloxanthin biosynthesis protein, putative
著者Zhang, Y, Winsor, J, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-03
公開日2012-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a putative S. aureus enzyme involved in the biosynthesis of staphyloxanthin
To be Published
2LBC
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BU of 2lbc by Molmil
solution structure of tandem UBA of USP13
分子名称: Ubiquitin carboxyl-terminal hydrolase 13
著者Zhang, Y, Zhou, C, Zhou, Z, Song, A, Hu, H.
登録日2011-03-29
公開日2012-03-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin.
Plos One, 6, 2011
3PQF
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BU of 3pqf by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus subtilis mutation H171C complexed with NAD+
分子名称: L-lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Zhang, Y, Garavito, R.M.
登録日2010-11-26
公開日2012-01-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of L-lactate dehydrogenase from Bacillus subtilis mutation H171C complexed with NAD+
To be Published

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