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2FLC
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BU of 2flc by Molmil
Post-Reactive Complex of Restriction Endonuclease HinP1I with Nicked Cognate DNA and Magnesium Ions
分子名称: 5'-D(*CP*CP*AP*G)-3', 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', 5'-D(P*CP*GP*CP*TP*GP*G)-3', ...
著者Horton, J.R.
登録日2006-01-05
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
7VYV
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BU of 7vyv by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
分子名称: Depolymerase
著者Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
登録日2021-11-15
公開日2023-08-30
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
7VZ3
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BU of 7vz3 by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
分子名称: Depolymerase
著者Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
登録日2021-11-15
公開日2023-08-30
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
5VEB
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BU of 5veb by Molmil
Crystal structure of a Fab binding to extracellular domain 5 of Cadherin-6
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Cadherin-6, anti-CDH6 Fab heavy chain, ...
著者Zhu, X, Bialucha, C.U, London, A, Clark, K, Hu, T.
登録日2017-04-04
公開日2017-06-07
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Discovery and Optimization of HKT288, a Cadherin-6-Targeting ADC for the Treatment of Ovarian and Renal Cancers.
Cancer Discov, 7, 2017
7E8O
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BU of 7e8o by Molmil
Crystal structure of proteinaceous RNase P(PRORP) from Planctomycetes bacterium GWF2_40_8 complexed with Escherichia coli histidine pre-tRNA
分子名称: CALCIUM ION, RNA-free ribonuclease P, histidine pre-tRNA
著者Li, Y.Y, Gan, J.H.
登録日2021-03-02
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P.
Nat Commun, 13, 2022
7E8J
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BU of 7e8j by Molmil
Crystal structure of Proteinaceous RNase P (PRORP) from Thermococcus celer
分子名称: RNA-free ribonuclease P
著者Li, Y.Y, Gan, J.H.
登録日2021-03-02
公開日2022-03-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P.
Nat Commun, 13, 2022
7E8K
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BU of 7e8k by Molmil
Crystal structure of Proteinaceous RNase P (PRORP) from Planctomycetes bacterium GWF2_40_8
分子名称: RNA-free ribonuclease P, SULFATE ION
著者Li, Y.Y, Gan, J.H.
登録日2021-03-02
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures and insights into precursor tRNA 5'-end processing by prokaryotic minimal protein-only RNase P.
Nat Commun, 13, 2022
2FKC
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BU of 2fkc by Molmil
Crystal Form I of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ion
分子名称: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', CALCIUM ION, R.HinP1I restriction endonuclease
著者Horton, J.R.
登録日2006-01-04
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
2FKH
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BU of 2fkh by Molmil
Crystal Form II of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ions
分子名称: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', CALCIUM ION, R.HinP1I Restriction Endonuclease
著者Horton, J.R.
登録日2006-01-04
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
7W1S
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BU of 7w1s by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
分子名称: Nanobody Nb-007, Spike protein S1
著者Yang, J, Lin, S, Sun, H.L, Lu, G.W.
登録日2021-11-20
公開日2022-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献A Potent Neutralizing Nanobody Targeting the Spike Receptor-Binding Domain of SARS-CoV-2 and the Structural Basis of Its Intimate Binding.
Front Immunol, 13, 2022
7XA7
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BU of 7xa7 by Molmil
Crystal structure of SARS-CoV-2 receptor-binding domain in complex with intermediate horseshoe bat ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, Spike protein S1, ...
著者Tang, L.F, Zhang, D, Han, P, Qi, J.X.
登録日2022-03-17
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Structural basis of SARS-CoV-2 and its variants binding to intermediate horseshoe bat ACE2.
Int J Biol Sci, 18, 2022
7XOE
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BU of 7xoe by Molmil
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,peptide
著者Wu, Z, Yu, Z, Tan, S, Lu, J, Lu, G, Lin, J.
登録日2022-05-01
公開日2024-02-14
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Preclinical evaluation of RQ3013, a broad-spectrum mRNA vaccine against SARS-CoV-2 variants.
Sci Bull (Beijing), 68, 2023
7XOG
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BU of 7xog by Molmil
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,peptide, ...
著者Wu, Z, Yu, Z, Tan, S, Lu, J, Lu, G, Lin, J.
登録日2022-05-01
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Preclinical evaluation of RQ3013, a broad-spectrum mRNA vaccine against SARS-CoV-2 variants.
Sci Bull (Beijing), 68, 2023
7RCZ
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BU of 7rcz by Molmil
Crystal structure of C. difficile SpoVD in complex with ampicillin
分子名称: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Sacco, M, Chen, Y.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A unique class of Zn 2+ -binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile.
Nat Commun, 13, 2022
7RCY
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BU of 7rcy by Molmil
Crystal structure of C. difficile penicillin-binding protein 2 in complex with ceftobiprole
分子名称: (2R)-2-[(1R)-1-{[(2Z)-2-(5-amino-1,2,4-thiadiazol-3-yl)-2-(hydroxyimino)acetyl]amino}-2-oxoethyl]-5-({2-oxo-1-[(3R)-pyr rolidin-3-yl]-2,5-dihydro-1H-pyrrol-3-yl}methyl)-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Penicillin-binding protein, ZINC ION
著者Sacco, M, Chen, Y.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A unique class of Zn 2+ -binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile.
Nat Commun, 13, 2022
7RCX
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BU of 7rcx by Molmil
Crystal structure of C. difficile penicillin-binding protein 2 in apo form
分子名称: GLYCEROL, Penicillin-binding protein, SULFATE ION, ...
著者Sacco, M, Chen, Y.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A unique class of Zn 2+ -binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile.
Nat Commun, 13, 2022
7RD0
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BU of 7rd0 by Molmil
Crystal structure of C. difficile penicillin-binding protein 3 in apo form
分子名称: GLYCEROL, Penicillin-binding protein, ZINC ION
著者Sacco, M, Chen, Y.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A unique class of Zn 2+ -binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile.
Nat Commun, 13, 2022
7RCW
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BU of 7rcw by Molmil
Crystal structure of C. difficile penicillin-binding protein 2 in complex with ampicillin
分子名称: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Sacco, M, Chen, Y.
登録日2021-07-08
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A unique class of Zn 2+ -binding serine-based PBPs underlies cephalosporin resistance and sporogenesis in Clostridioides difficile.
Nat Commun, 13, 2022
8KI4
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BU of 8ki4 by Molmil
Crystal structure of human HSP90 in intermediate state
分子名称: 1,2-ETHANEDIOL, Heat shock protein HSP 90-alpha
著者Xu, C, Zhang, X.L, Bai, F.
登録日2023-08-22
公開日2024-04-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Accurate Characterization of Binding Kinetics and Allosteric Mechanisms for the HSP90 Chaperone Inhibitors Using AI-Augmented Integrative Biophysical Studies.
Jacs Au, 4, 2024
7Y0Z
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BU of 7y0z by Molmil
Crystal structure of Pseudomonas aeruginosa PvrA
分子名称: TetR family transcriptional regulator
著者Liang, H, Zhang, Q, Bartlam, M.
登録日2022-06-06
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
7Y0Y
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Crystal structure of Pseudomonas aeruginosa PvrA (SeMet)
分子名称: TetR family transcriptional regulator
著者Liang, H, Zhang, Q, Bartlam, M.
登録日2022-06-06
公開日2023-02-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
8IXE
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BU of 8ixe by Molmil
GMPCPP-Alpha1C/Beta2A-microtubule decorated with kinesin seam region
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ...
著者Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y.
登録日2023-03-31
公開日2023-08-16
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules.
Acta Biochim.Biophys.Sin., 55, 2023
8IXB
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BU of 8ixb by Molmil
GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin seam region
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ...
著者Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y.
登録日2023-03-31
公開日2023-08-16
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules.
Acta Biochim.Biophys.Sin., 55, 2023
8IXG
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BU of 8ixg by Molmil
GMPCPP-Alpha4A/Beta2A-microtubule decorated with kinesin seam region
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-1 heavy chain, ...
著者Zheng, W, Zhao, Q.Y, Diao, L, Bao, L, Cong, Y.
登録日2023-03-31
公開日2023-08-16
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM of alpha-tubulin isotype-containing microtubules revealed a contracted structure of alpha 4A/ beta 2A microtubules.
Acta Biochim.Biophys.Sin., 55, 2023
7Y9N
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BU of 7y9n by Molmil
an engineered 5-helix bundle derived from SARS-CoV-2 S2 in complex with HR2P
分子名称: SARS-coV-2 S2 subunit, Spike protein S2',5HB-H2
著者Lu, G.W, Lin, X, Guo, L.Y, Lin, S.
登録日2022-06-25
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.885 Å)
主引用文献An engineered 5-helix bundle derived from SARS-CoV-2 S2 pre-binds sarbecoviral spike at both serological- and endosomal-pH to inhibit virus entry.
Emerg Microbes Infect, 11, 2022

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