Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8IX0
DownloadVisualize
BU of 8ix0 by Molmil
Cryo-EM structure of unprotonated LHCII nanodisc at high pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
8IX2
DownloadVisualize
BU of 8ix2 by Molmil
Cryo-EM structure of unprotonated LHCII nanodisc at low pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
8IWX
DownloadVisualize
BU of 8iwx by Molmil
Cryo-EM structure of unprotonated LHCII in detergent solution at high pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
8IWY
DownloadVisualize
BU of 8iwy by Molmil
Cryo-EM structure of protonated LHCII in detergent solution at low pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
8IX1
DownloadVisualize
BU of 8ix1 by Molmil
Cryo-EM structure of protonated LHCII nanodisc at low pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
8IWZ
DownloadVisualize
BU of 8iwz by Molmil
Cryo-EM structure of unprotonated LHCII in detergent solution at low pH value
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Ruan, M.X, Ding, W.
登録日2023-03-31
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献Cryo-EM structures of LHCII in photo-active and photo-protecting states reveal allosteric regulation of light harvesting and excess energy dissipation.
Nat.Plants, 9, 2023
5JHP
DownloadVisualize
BU of 5jhp by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L179A and I195A mutant in complex with rice D53 repressor EAR peptide motif
分子名称: Protein TPR1, The rice D53 EAR peptide (794-808)
著者Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
登録日2016-04-21
公開日2017-07-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
8IYX
DownloadVisualize
BU of 8iyx by Molmil
Cryo-EM structure of the GPR34 receptor in complex with the antagonist YL-365
分子名称: 1-[4-(3-chlorophenyl)phenyl]carbonyl-4-[2-(4-phenylmethoxyphenyl)ethanoylamino]piperidine-4-carboxylic acid, Probable G-protein coupled receptor 34,YL-365
著者Jia, G.W, Wang, X, Zhang, C.B, Dong, H.H, Su, Z.M.
登録日2023-04-06
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Cryo-EM structures of human GPR34 enable the identification of selective antagonists.
Proc.Natl.Acad.Sci.USA, 120, 2023
5J9K
DownloadVisualize
BU of 5j9k by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) in complex with rice D53 repressor EAR peptide motif
分子名称: Protein TPR1, ZINC ION, rice D53 peptide 794-808
著者Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
登録日2016-04-10
公開日2017-07-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
5JGC
DownloadVisualize
BU of 5jgc by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L111A, L130A, L179A and I195A mutant
分子名称: Protein TPR1, ZINC ION
著者Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
登録日2016-04-20
公開日2017-07-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
7NUE
DownloadVisualize
BU of 7nue by Molmil
Crystal structure of mouse PRMT6 in complex with inhibitor EML736
分子名称: Protein arginine N-methyltransferase 6, methyl 6-[5-[[~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]carbamimidoyl]amino]pentylcarbamoylamino]-4-oxidanyl-naphthalene-2-carboxylate
著者Bonnefond, L, Cavarelli, J.
登録日2021-03-11
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Turning Nonselective Inhibitors of Type I Protein Arginine Methyltransferases into Potent and Selective Inhibitors of Protein Arginine Methyltransferase 4 through a Deconstruction-Reconstruction and Fragment-Growing Approach.
J.Med.Chem., 65, 2022
7NUD
DownloadVisualize
BU of 7nud by Molmil
Crystal structure of mouse PRMT6 in complex with inhibitor EML734
分子名称: Protein arginine N-methyltransferase 6, methyl 6-[3-[[~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]carbamimidoyl]amino]propylcarbamoylamino]-4-oxidanyl-naphthalene-2-carboxylate
著者Bonnefond, L, Cavarelli, J.
登録日2021-03-11
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Turning Nonselective Inhibitors of Type I Protein Arginine Methyltransferases into Potent and Selective Inhibitors of Protein Arginine Methyltransferase 4 through a Deconstruction-Reconstruction and Fragment-Growing Approach.
J.Med.Chem., 65, 2022
1NJ3
DownloadVisualize
BU of 1nj3 by Molmil
Structure and Ubiquitin Interactions of the Conserved NZF Domain of Npl4
分子名称: NPL4, ZINC ION
著者Wang, B, Alam, S.L, Meyer, H.H, Payne, M, Stemmler, T.L, Davis, D.R, Sundquist, W.I.
登録日2002-12-30
公開日2003-04-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and ubiquitin interactions of the conserved zinc finger domain of Npl4.
J.Biol.Chem., 278, 2003
8TGN
DownloadVisualize
BU of 8tgn by Molmil
VMAT1 dimer with serotonin and reserpine
分子名称: Chromaffin granule amine transporter, SEROTONIN, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
7P2R
DownloadVisualize
BU of 7p2r by Molmil
Crystal structure of mouse PRMT6 in complex with inhibitor EML980
分子名称: Protein arginine N-methyltransferase 6, S-ADENOSYL-L-HOMOCYSTEINE, methyl 6-[4-[[N-[2-[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]ethyl]carbamimidoyl]amino]butylcarbamoylamino]-4-oxidanyl-naphthalene-2-carboxylate
著者Bonnefond, L, Cavarelli, J.
登録日2021-07-06
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Turning Nonselective Inhibitors of Type I Protein Arginine Methyltransferases into Potent and Selective Inhibitors of Protein Arginine Methyltransferase 4 through a Deconstruction-Reconstruction and Fragment-Growing Approach.
J.Med.Chem., 65, 2022
8TGH
DownloadVisualize
BU of 8tgh by Molmil
VMAT1 dimer with amphetamine and reserpine
分子名称: (2S)-1-phenylpropan-2-amine, Chromaffin granule amine transporter, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGG
DownloadVisualize
BU of 8tgg by Molmil
VMAT1 dimer with MPP+ and reserpine
分子名称: 1-methyl-4-phenylpyridin-1-ium, Chromaffin granule amine transporter, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGL
DownloadVisualize
BU of 8tgl by Molmil
VMAT1 dimer with norepinephrine and reserpine
分子名称: Chromaffin granule amine transporter, L-NOREPINEPHRINE, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGM
DownloadVisualize
BU of 8tgm by Molmil
VMAT1 dimer with reserpine
分子名称: VMAT1 dimer with reserpine, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGI
DownloadVisualize
BU of 8tgi by Molmil
VMAT1 dimer with dopamine and reserpine
分子名称: Chromaffin granule amine transporter, L-DOPAMINE, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGJ
DownloadVisualize
BU of 8tgj by Molmil
VMAT1 dimer in unbound form and with reserpine
分子名称: VMAT1 dimer in unbound form and with reserpine, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
8TGK
DownloadVisualize
BU of 8tgk by Molmil
VMAT1 dimer with histamine and reserpine
分子名称: Chromaffin granule amine transporter, HISTAMINE, reserpine
著者Ye, J, Liu, B, Li, W.
登録日2023-07-12
公開日2024-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into vesicular monoamine storage and drug interactions.
Nature, 629, 2024
5JA5
DownloadVisualize
BU of 5ja5 by Molmil
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L111A and L130A mutant in complex with rice D53 repressor EAR peptide motif
分子名称: Protein TPR1, The rice D53 peptide (a.a. 794-808), ZINC ION
著者Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K.
登録日2016-04-12
公開日2017-07-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A D53 repression motif induces oligomerization of TOPLESS corepressors and promotes assembly of a corepressor-nucleosome complex.
Sci Adv, 3, 2017
4OD6
DownloadVisualize
BU of 4od6 by Molmil
Structure of Smr domain of MutS2 from Deinococcus radiodurans, Mn2+ soaked
分子名称: Endonuclease MutS2
著者Zhang, H, Zhao, Y, Xu, Q, Hua, Y.J.
登録日2014-01-10
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.199 Å)
主引用文献Structural and functional studies of MutS2 from Deinococcus radiodurans.
Dna Repair, 21, 2014
4OCH
DownloadVisualize
BU of 4och by Molmil
Apo structure of Smr domain of MutS2 from Deinococcus radiodurans
分子名称: Endonuclease MutS2, GLYCEROL
著者Zhang, H, Zhao, Y, Xu, Q, Hua, Y.J.
登録日2014-01-09
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4001 Å)
主引用文献Structural and functional studies of MutS2 from Deinococcus radiodurans.
Dna Repair, 21, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon