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4MOT
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BU of 4mot by Molmil
Structure of Streptococcus pneumonia pare in complex with AZ13072886
分子名称: 1-[4-(3-methylbutyl)-5-oxo-6-(pyridin-3-yl)-4,5-dihydro[1,3]thiazolo[5,4-b]pyridin-2-yl]-3-prop-2-en-1-ylurea, Topoisomerase IV subunit B
著者Ogg, D, Boriack-Sjodin, P.A.
登録日2013-09-12
公開日2013-11-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Thiazolopyridone ureas as DNA gyrase B inhibitors: Optimization of antitubercular activity and efficacy.
Bioorg.Med.Chem.Lett., 24, 2014
4AKX
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BU of 4akx by Molmil
Structure of the heterodimeric complex ExoU-SpcU from the type III secretion system (T3SS) of Pseudomonas aeruginosa
分子名称: EXOU, SPCU
著者Gendrin, C, Contreras-Martel, C, Bouillot, S, Elsen, S, Lemaire, D, Skoufias, D.A, Huber, P, Attree, I, Dessen, A.
登録日2012-02-29
公開日2012-04-18
最終更新日2012-05-30
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structural Basis of Cytotoxicity Mediated by the Type III Secretion Toxin Exou from Pseudomonas Aeruginosa
Plos Pathog., 8, 2012
3CS8
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BU of 3cs8 by Molmil
Structural and Biochemical Basis for the Binding Selectivity of PPARg to PGC-1a
分子名称: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), PGC-1alfa peptide, ...
著者Li, Y, Martynowski, D.
登録日2008-04-09
公開日2008-06-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and biochemical basis for the binding selectivity of peroxisome proliferator-activated receptor gamma to PGC-1alpha.
J.Biol.Chem., 283, 2008
8A6L
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BU of 8a6l by Molmil
Human 4F2hc-LAT2 heterodimeric amino acid transporter in complex with anticalin D11vs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2hc cell-surface antigen heavy chain, Anticalin D11vs, ...
著者Jeckelmann, J.M, Fotiadis, D.
登録日2022-06-18
公開日2022-11-09
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structure of the human heterodimeric transporter 4F2hc-LAT2 in complex with Anticalin, an alternative binding protein for applications in single-particle cryo-EM.
Sci Rep, 12, 2022
1EUB
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BU of 1eub by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED TO A POTENT NON-PEPTIDIC SULFONAMIDE INHIBITOR
分子名称: 1-METHYLOXY-4-SULFONE-BENZENE, 3-METHYLPYRIDINE, CALCIUM ION, ...
著者Zhang, X, Gonnella, N.C, Koehn, J, Pathak, N, Ganu, V, Melton, R, Parker, D, Hu, S.I, Nam, K.Y.
登録日2000-04-14
公開日2001-04-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the catalytic domain of human collagenase-3 (MMP-13) complexed to a potent non-peptidic sulfonamide inhibitor: binding comparison with stromelysin-1 and collagenase-1.
J.Mol.Biol., 301, 2000
7ZR2
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BU of 7zr2 by Molmil
Crystal structure of a chimeric protein mimic of SARS-CoV-2 Spike HR1 in complex with HR2
分子名称: Spike protein S2', Spike protein S2',Chimeric protein mimic of SARS-CoV-2 Spike HR1
著者Camara-Artigas, A, Gavira, J.A, Cano-Munoz, M, Polo-Megias, D, Conejero-Lara, F.
登録日2022-05-03
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Novel chimeric proteins mimicking SARS-CoV-2 spike epitopes with broad inhibitory activity.
Int.J.Biol.Macromol., 222, 2022
2OJ1
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BU of 2oj1 by Molmil
Disulfide-linked dimer of azurin N42C/M64E double mutant
分子名称: Azurin, COPPER (II) ION
著者de Jongh, T.E, Hoffmann, M, Einsle, O, Cavazzini, D, Rossi, G.L, Ubbink, M, Canters, G.W.
登録日2007-01-12
公開日2007-11-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Inter- and intramolecular electron transfer in modified azurin dimers
Eur.J.Inorg.Chem., 2007, 2007
7ZRD
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BU of 7zrd by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1-P tight conformation, stabilised with the inhibitor orthovanadate
分子名称: CARDIOLIPIN, POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, ...
著者Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Wunnicke, D, Stansfeld, P.J, Haenelt, I, Paulino, C.
登録日2022-05-04
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
8F0V
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BU of 8f0v by Molmil
Lipocalin-like Milk protein-2 - E38A mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein, ZINC ION
著者Subramanian, R, KanagaVijayan, D.
登録日2022-11-04
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
8F0Y
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BU of 8f0y by Molmil
Lipocalin-like Milk protein-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Milk protein
著者Subramanian, R, KanagaVijayan, D, Shantakumar, R.P.S.
登録日2022-11-04
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins.
Plos One, 18, 2023
2OKE
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BU of 2oke by Molmil
High Resolution Crystal Structures of Vaccinia Virus dUTPase
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, ...
著者Schormann, N, Chattopadhyay, D.
登録日2007-01-16
公開日2007-05-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of vaccinia virus dUTPase and its nucleotide complexes.
Acta Crystallogr.,Sect.D, 63, 2007
3JRG
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BU of 3jrg by Molmil
Crystal structure of Fis bound to 27 bp non consensus sequence DNA F18
分子名称: DNA (27-MER), DNA-binding protein fis
著者Stella, S, Cascio, D, Johnson, R.C.
登録日2009-09-08
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
2NUD
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BU of 2nud by Molmil
The structure of the type III effector AvrB complexed with a high-affinity RIN4 peptide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Avirulence B protein, RPM1-interacting protein 4, ...
著者Singer, A.U, Desveaux, D, Wu, A.J, McNulty, B, Sondek, J, Dangl, J.L.
登録日2006-11-09
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Type III Effector Activation via Nucleotide Binding, Phosphorylation, and Host Target Interaction.
Plos Pathog., 3, 2007
3JRW
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BU of 3jrw by Molmil
Phosphorylated BC domain of ACC2
分子名称: Acetyl-CoA carboxylase 2
著者Cho, Y.S, Lee, J.I, Shin, D, Kim, H.T, Lee, T.G, Heo, Y.S.
登録日2009-09-09
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular mechanism for the regulation of human ACC2 through phosphorylation by AMPK
Biochem.Biophys.Res.Commun., 391, 2010
3CXV
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BU of 3cxv by Molmil
Crystal structure of the Cytochrome P450 CYP121 A233G mutant from Mycobacterium tuberculosis
分子名称: Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Leys, D.
登録日2008-04-25
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of active site structure in CYP121. A cytochrome P450 essential for viability of Mycobacterium tuberculosis H37Rv.
J.Biol.Chem., 283, 2008
3CXX
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BU of 3cxx by Molmil
Crystal structure of cytochrome P450 CYP121 F338H from M. tuberculosis
分子名称: Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Leys, D.
登録日2008-04-25
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of the active site structure of CY121
TO BE PUBLISHED
2NVQ
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BU of 2nvq by Molmil
RNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTP
分子名称: 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3', ...
著者Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
登録日2006-11-13
公開日2006-12-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
3ZKR
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BU of 3zkr by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with bromoform
分子名称: CYS-LOOP LIGAND-GATED ION CHANNEL, TRIBROMOMETHANE
著者Spurny, R, Billen, B, Howard, R.J, Brams, M, Debaveye, S, Price, K.L, Weston, D.A, Strelkov, S.V, Tytgat, J, Bertrand, S, Bertrand, D, Lummis, S.C.R, Ulens, C.
登録日2013-01-24
公開日2013-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.649 Å)
主引用文献Multisite Binding of a General Anesthetic to the Prokaryotic Pentameric Erwinia Chrysanthemi Ligand-Gated Ion Channel (Elic).
J.Biol.Chem., 288, 2013
6TM5
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BU of 6tm5 by Molmil
Cryo-EM structure of the Anaphase-promoting complex/Cyclosome, in complex with the Nek2A substrate at 3.9 angstrom resolution
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
著者Alfieri, C, Barford, D.
登録日2019-12-03
公開日2020-02-19
最終更新日2020-06-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献A unique binding mode of Nek2A to the APC/C allows its ubiquitination during prometaphase.
Embo Rep., 21, 2020
2NWL
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BU of 2nwl by Molmil
Crystal structure of GltPh in complex with L-Asp
分子名称: ASPARTIC ACID, PALMITIC ACID, glutamate symport protein
著者Gouaux, E, Boudker, O, Ryan, R, Yernool, D, Shimamoto, K.
登録日2006-11-15
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter.
Nature, 445, 2007
8AAC
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BU of 8aac by Molmil
African cichlid nackednavirus capsid at pH 7.5
分子名称: C protein
著者Pfister, S, Rabl, J, Boehringer, D, Meier, B.H.
登録日2022-07-01
公開日2023-04-05
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural conservation of HBV-like capsid proteins over hundreds of millions of years despite the shift from non-enveloped to enveloped life-style.
Nat Commun, 14, 2023
2NY1
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BU of 2ny1 by Molmil
HIV-1 gp120 Envelope Glycoprotein (I109C, T257S, S334A, S375W, Q428C) Complexed with CD4 and Antibody 17b
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ...
著者Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
登録日2006-11-20
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
3JW8
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BU of 3jw8 by Molmil
Crystal structure of human mono-glyceride lipase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, MGLL protein
著者Bertrand, T, Auge, F, Houtmann, J, Rak, A, Vallee, F, Mikol, V, Berne, P.F, Michot, N, Cheuret, D, Hoornaert, C, Mathieu, M.
登録日2009-09-18
公開日2010-01-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for human monoglyceride lipase inhibition.
J.Mol.Biol., 396, 2010
3ZRB
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Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators
分子名称: (R)-N-[1-[4-(3,5-DIMETHYLISOXAZOL-4-YL)PHENYL]ETHYL]-3,5-DIMETHYLISOXAZOLE-4-SULFONAMIDE, 2-CHLORO-N-[[4-(3,5-DIMETHYLISOXAZOL-4-YL)PHENYL]METHYL]-1,4-DIMETHYL-1H-PYRAZOLE-4-SULFONAMIDE, GLYCEROL, ...
著者Lusher, S.J, Raaijmakers, H.C.A, Vu-Pham, D, Dechering, K, Wai Lam, T, Brown, A.R, Hamilton, N.M, Nimz, O, Azevedo, R, Mcguire, R, Oubrie, A, de Vlieg, J.
登録日2011-06-15
公開日2011-08-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for agonism and antagonism for a set of chemically related progesterone receptor modulators.
J. Biol. Chem., 286, 2011
3ZRH
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Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain reveals an Ankyrin-repeat ubiquitin binding domain (AnkUBD)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, UBIQUITIN THIOESTERASE ZRANB1
著者Licchesi, J.D.F, Akutsu, M, Komander, D.
登録日2011-06-16
公開日2011-12-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献An Ankyrin-Repeat Ubiquitin-Binding Domain Determines Trabid'S Specificity for Atypical Ubiquitin Chains.
Nat.Struct.Mol.Biol., 19, 2011

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