Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4EFL
DownloadVisualize
BU of 4efl by Molmil
Crystal structure of H-Ras WT in complex with GppNHp (state 1)
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Muraoka, S, Shima, F, Araki, M, Inoue, T, Yoshimoto, A, Ijiri, Y, Seki, N, Tamura, A, Kumasaka, T, Yamamoto, M, Kataoka, T.
登録日2012-03-30
公開日2012-05-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of the state 1 conformations of the GTP-bound H-Ras protein and its oncogenic G12V and Q61L mutants
Febs Lett., 586, 2012
2HMC
DownloadVisualize
BU of 2hmc by Molmil
The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
分子名称: Dihydrodipicolinate synthase, MAGNESIUM ION
著者Kim, Y, Zhang, R, Xu, X, Zheng, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-07-11
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens
To be Published, 2006
2PMN
DownloadVisualize
BU of 2pmn by Molmil
Crystal structure of PfPK7 in complex with an ATP-site inhibitor
分子名称: 4-(6-{[(1S)-1-(HYDROXYMETHYL)-2-METHYLPROPYL]AMINO}IMIDAZO[1,2-B]PYRIDAZIN-3-YL)BENZONITRILE, Ser/Thr protein kinase, putative
著者Merckx, A, Echalier, A, Noble, M, Endicott, J.
登録日2007-04-23
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of P. falciparum protein kinase 7 identify an activation motif and leads for inhibitor design.
Structure, 16, 2008
3HMK
DownloadVisualize
BU of 3hmk by Molmil
Crystal Structure of Serine Racemase
分子名称: MANGANESE (II) ION, PYRIDOXAL-5'-PHOSPHATE, Serine racemase
著者Smith, M.A, Barker, J, Mack, V, Ebneth, A, Felicetti, B, Woods, M.
登録日2009-05-29
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of mammalian serine racemase: evidence for conformational changes upon inhibitor binding.
J.Biol.Chem., 285, 2010
1TE1
DownloadVisualize
BU of 1te1 by Molmil
Crystal structure of family 11 xylanase in complex with inhibitor (XIP-I)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, endo-1,4-xylanase, ...
著者Payan, F, Leone, P, Furniss, C, Tahir, T, Durand, A, Porciero, S, Manzanares, P, Williamson, G, Gilbert, H.J, Juge, N, Roussel, A.
登録日2004-05-24
公開日2004-07-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Dual Nature of the Wheat Xylanase Protein Inhibitor XIP-I: STRUCTURAL BASIS FOR THE INHIBITION OF FAMILY 10 AND FAMILY 11 XYLANASES.
J.Biol.Chem., 279, 2004
5FJY
DownloadVisualize
BU of 5fjy by Molmil
Crystal structure of mouse kinesin light chain 2 (residues 161-480)
分子名称: KINESIN LIGHT CHAIN 2, UNKNOWN PEPTIDE
著者Pernigo, S, Yip, Y.Y, Sanger, A, Xu, M, Dodding, M.P, Steiner, R.A.
登録日2015-10-14
公開日2016-02-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献The Light Chains of Kinesin-1 are Autoinhibited.
Proc.Natl.Acad.Sci.USA, 113, 2016
4LPU
DownloadVisualize
BU of 4lpu by Molmil
Crystal structure of TENCON variant P40AR2-32R2
分子名称: TENCON variant P40AR2-32R2
著者Teplyakov, A, Obmolova, G, Gilliland, G.L.
登録日2013-07-16
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold.
Proteins, 82, 2014
3HVG
DownloadVisualize
BU of 3hvg by Molmil
Structure of bace (beta secretase) in Complex with EV0
分子名称: 2-amino-6-propylpyrimidin-4(3H)-one, Beta-secretase 1, GLYCEROL
著者Godemann, R, Madden, J, Kramer, J, Smith, M.A, Barker, J, Ebneth, A.
登録日2009-06-16
公開日2009-11-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Fragment-Based Discovery of BACE1 Inhibitors Using Functional Assays
Biochemistry, 48, 2009
1SU9
DownloadVisualize
BU of 1su9 by Molmil
Reduced structure of the soluble domain of ResA
分子名称: Thiol-disulfide oxidoreductase resA
著者Crow, A, Acheson, R.M, Le Brun, N.E, Oubrie, A.
登録日2004-03-26
公開日2004-05-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Basis of Redox-coupled Protein Substrate Selection by the Cytochrome c Biosynthesis Protein ResA.
J.Biol.Chem., 279, 2004
3ZC6
DownloadVisualize
BU of 3zc6 by Molmil
Crystal structure of JAK3 kinase domain in complex with an indazole substituted pyrrolopyrazine inhibitor
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, N-[(2R)-1-(3-cyanoazetidin-1-yl)-1-oxidanylidene-propan-2-yl]-2-(6-fluoranyl-1-methyl-indazol-3-yl)-5H-pyrrolo[2,3-b]pyrazine-7-carboxamide, ...
著者Kuglstatter, A, Jestel, A, Nagel, S, Boettcher, J, Blaesse, M.
登録日2012-11-16
公開日2013-09-25
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Strategic Use of Conformational Bias and Structure Based Design to Identify Potent Jak3 Inhibitors with Improved Selectivity Against the Jak Family and the Kinome.
Bioorg.Med.Chem.Lett., 23, 2013
8SBM
DownloadVisualize
BU of 8sbm by Molmil
Crystal structure of the wild-type Catalytic ATP-binding domain of Mtb DosS
分子名称: 1,2-ETHANEDIOL, GAF domain-containing protein, SODIUM ION, ...
著者Larson, G, Shi, K, Aihara, H, Bhagi-Damodaran, A.
登録日2023-04-03
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Understanding ATP Binding to DosS Catalytic Domain with a Short ATP-Lid.
Biochemistry, 62, 2023
5IPK
DownloadVisualize
BU of 5ipk by Molmil
Structure of the R432A variant of Adeno-associated virus type 2 VLP
分子名称: Capsid protein VP1
著者Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
登録日2016-03-09
公開日2016-07-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
4NV8
DownloadVisualize
BU of 4nv8 by Molmil
Crystal Structure of Mesorhizobium Loti Arylamine N-acetyltransferase F42W Mutant
分子名称: Arylamine N-acetyltransferase
著者Xu, X.M, Haouz, A, Weber, P, Li de la sierra-gallay, I, Kubiak, X, Dupret, J.-M, Rodrigues-lima, F.
登録日2013-12-05
公開日2015-01-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Insight into cofactor recognition in arylamine N-acetyltransferase enzymes: structure of Mesorhizobium loti arylamine N-acetyltransferase in complex with coenzyme A.
Acta Crystallogr.,Sect.D, 71, 2015
8P6Y
DownloadVisualize
BU of 8p6y by Molmil
Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-05-30
公開日2023-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
1TD0
DownloadVisualize
BU of 1td0 by Molmil
Viral capsid protein SHP at pH 5.5
分子名称: Head decoration protein
著者Chang, C, Forrer, P, Ott, D, Wlodawer, A, Plueckthun, A.
登録日2004-05-21
公開日2004-11-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Kinetic Stability and Crystal Structure of the Viral Capsid Protein SHP
J.Mol.Biol., 344, 2004
1TDW
DownloadVisualize
BU of 1tdw by Molmil
Crystal structure of double truncated human phenylalanine hydroxylase BH4-responsive PKU mutant A313T.
分子名称: FE (III) ION, Phenylalanine-4-hydroxylase
著者Erlandsen, H, Pey, A.L, Gamez, A, Perez, B, Desviat, L.R, Aguado, C, Koch, R, Surendran, S, Tyring, S, Matalon, R, Scriver, C.R, Ugarte, M, Martinez, A, Stevens, R.C.
登録日2004-05-24
公開日2004-11-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Correction of kinetic and stability defects by tetrahydrobiopterin in phenylketonuria patients with certain phenylalanine hydroxylase mutations.
Proc.Natl.Acad.Sci.Usa, 101, 2004
4O22
DownloadVisualize
BU of 4o22 by Molmil
Binary complex of metal-free PKAc with SP20.
分子名称: Phosphorylated peptide pSP20., cAMP-dependent protein kinase catalytic subunit alpha.
著者Das, A, Kovalevsky, A.Y, Gerlits, O, Langan, P, Heller, W.T, Keshwani, M, Taylor, S.S.
登録日2013-12-16
公開日2014-05-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Metal-Free cAMP-Dependent Protein Kinase Can Catalyze Phosphoryl Transfer.
Biochemistry, 53, 2014
8P7A
DownloadVisualize
BU of 8p7a by Molmil
Crystal structure of the ORD domain of human ORP8
分子名称: Oxysterol-binding protein-related protein 8
著者Eisenreichova, A, Klima, M, Boura, E.
登録日2023-05-30
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Crystal Structure of the ORP8 Lipid Transport ORD Domain: Model of Lipid Transport.
Cells, 12, 2023
3X0W
DownloadVisualize
BU of 3x0w by Molmil
Crystal structure of PLEKHM1 LIR-fused human LC3B_2-119
分子名称: Microtubule-associated proteins 1A/1B light chain 3B
著者Suzuki, H, McEwan, D.G, Popovic, D, Gubas, A, Terawaki, S, Stadel, D, Coxon, F, Stegmann, D.M, Bhogaraju, S, Maddi, K, Kirchhoff, A, Gatti, E, Helfrich, M.H, Behrends, C, Pierre, P, Dikic, I, Wakatsuki, S.
登録日2014-10-22
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献PLEKHM1 regulates autophagosome-lysosome fusion through HOPS complex and LC3/GABARAP proteins.
Mol.Cell, 57, 2015
1UXO
DownloadVisualize
BU of 1uxo by Molmil
The crystal structure of the ydeN gene product from B. subtilis
分子名称: Putative hydrolase YdeN
著者Janda, I.K, Devedjiev, Y, Cooper, D.R, Chruszcz, M, Derewenda, U, Gabrys, A, Minor, W, Joachimiak, A, Derewenda, Z.S, Midwest Center for Structural Genomics (MCSG)
登録日2004-02-27
公開日2004-05-27
最終更新日2022-05-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution.
Acta Crystallogr. D Biol. Crystallogr., 60, 2004
1B37
DownloadVisualize
BU of 1b37 by Molmil
A 30 ANGSTROM U-SHAPED CATALYTIC TUNNEL IN THE CRYSTAL STRUCTURE OF POLYAMINE OXIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (POLYAMINE OXIDASE), ...
著者Binda, C, Coda, A, Angelini, R, Federico, R, Ascenzi, P, Mattevi, A.
登録日1998-12-17
公開日1999-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase.
Structure Fold.Des., 7, 1999
8P97
DownloadVisualize
BU of 8p97 by Molmil
BtuB3G3 bound to cyanocobalamin with disordered EL8
分子名称: CYANOCOBALAMIN, Putative surface layer protein, TonB-dependent receptor
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2023-06-05
公開日2023-08-16
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
1NXP
DownloadVisualize
BU of 1nxp by Molmil
MicArec pH4.5
分子名称: DNA-binding response regulator, PHOSPHONIC ACID
著者Bent, C.J, Isaacs, N.W, Mitchell, T.J, Riboldi-Tunnicliffe, A.
登録日2003-02-11
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structure of the response regulator 02 receiver domain, the essential YycF two-component system of Streptococcus pneumoniae in both complexed and native states.
J.Bacteriol., 186, 2004
4C9W
DownloadVisualize
BU of 4c9w by Molmil
Crystal structure of NUDT1 (MTH1) with R-crizotinib
分子名称: 3-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]-5-(1-piperidin-4-yl-1H-pyrazol-4-yl)pyridin-2-amine, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, CHLORIDE ION, ...
著者Elkins, J.M, Salah, E, Huber, K, Superti-Furga, G, Abdul Azeez, K.R, Raynor, J, Krojer, T, von Delft, F, Bountra, C, Edwards, A, Knapp, S.
登録日2013-10-03
公開日2014-04-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Stereospecific Targeting of Mth1 by (S)-Crizotinib as an Anticancer Strategy.
Nature, 508, 2014
8P6V
DownloadVisualize
BU of 8p6v by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0942
分子名称: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
著者Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
登録日2023-05-30
公開日2023-08-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon