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7P8D
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Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with Mg2+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Tran, L.H, Urbanowicz, A, Jasinski, M, Jaskolski, M, Ruszkowski, M.
登録日2021-07-21
公開日2021-10-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis thaliana and Medicago truncatula .
Front Plant Sci, 12, 2021
7P8C
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Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with K+
分子名称: POTASSIUM ION, Receiver domain of histidine kinase 4
著者Tran, L.H, Urbanowicz, A, Jasinski, M, Jaskolski, M, Ruszkowski, M.
登録日2021-07-21
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis thaliana and Medicago truncatula .
Front Plant Sci, 12, 2021
8A9T
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Tubulin-[1,2]oxazoloisoindole-1 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Prota, A.E, Abel, A.-C, Steinmetz, M.O, Barraja, P, Montalbano, A, Spano, V.
登録日2022-06-29
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Development of [1,2]oxazoloisoindoles tubulin polymerization inhibitors: Further chemical modifications and potential therapeutic effects against lymphomas.
Eur.J.Med.Chem., 243, 2022
8A9Z
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Tubulin-[1,2]oxazoloisoindole-2e complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7-[(3,5-dimethoxyphenyl)methyl]pyrrolo[3,4-g][1,2]benzoxazole, CALCIUM ION, ...
著者Prota, A.E, Abel, A.-C, Steinmetz, M.O, Barraja, P, Montalbano, A, Spano, V.
登録日2022-06-29
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.294 Å)
主引用文献Development of [1,2]oxazoloisoindoles tubulin polymerization inhibitors: Further chemical modifications and potential therapeutic effects against lymphomas.
Eur.J.Med.Chem., 243, 2022
7PE1
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Cryo-EM structure of BMV-derived VLP expressed in E. coli and assembled in the presence of tRNA (tVLP)
分子名称: Coat protein
著者Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
登録日2021-08-09
公開日2022-03-02
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
7PE2
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BU of 7pe2 by Molmil
Cryo-EM structure of BMV-derived VLP expressed in E. coli (eVLP)
分子名称: Coat protein
著者Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
登録日2021-08-09
公開日2022-03-02
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
8CDB
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BU of 8cdb by Molmil
Proulilysin E229A structure
分子名称: CALCIUM ION, Ulilysin, ZINC ION
著者Rodriguez-Banqueri, A, Eckhard, U, Gomis-Ruth, F.X.
登録日2023-01-30
公開日2023-03-22
最終更新日2023-03-29
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structural insights into latency of the metallopeptidase ulilysin (lysargiNase) and its unexpected inhibition by a sulfonyl-fluoride inhibitor of serine peptidases.
Dalton Trans, 52, 2023
5WV7
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Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4A resolution
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*GP*TP*AP*CP*CP*CP*CP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-12-22
公開日2017-05-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.406 Å)
主引用文献Crystal structure of d(CCGGGGTACCCCGG)2 at 1.4 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
6A1O
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Crystal structures of disordered Z-type helices
分子名称: DNA (5'-D(P*CP*A)-3'), DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*G)-3'), ...
著者Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
登録日2018-06-07
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
6A1Q
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Crystal structures of disordered Z-type helices
分子名称: DNA (5'-D(P*CP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*G)-3')
著者Karthik, S, Mandal, P.K, Thirugnanasambandam, A, Gautham, N.
登録日2018-06-07
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structures of disordered Z-type helices.
Nucleosides Nucleotides Nucleic Acids, 38, 2019
8A28
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Structure of the astacin zymogen of LAST-MAM from Limulus polyphemus
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
著者Guevara, T, Rodriguez Banqueri, A.
登録日2022-06-02
公開日2022-10-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Zymogenic latency in an ∼250-million-year-old astacin metallopeptidase.
Acta Crystallogr D Struct Biol, 78, 2022
7Q7Q
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LIPIDIC CUBIC PHASE SERIAL FEMTOSECOND CRYSTALLOGRAPHY STRUCTURE OF A PHOTOSYNTHETIC REACTION CENTRE
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, ...
著者Baath, P, Banacore, A, Neutze, R.
登録日2021-11-09
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic reaction centre.
Acta Crystallogr D Struct Biol, 78, 2022
7Q7P
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LIPIDIC CUBIC PHASE SERIAL FEMTOSECOND CRYSTALLOGRAPHY STRUCTURE OF A PHOTOSYNTHETIC REACTION CENTRE
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, ...
著者Baath, P, Banacore, A, Neutze, R.
登録日2021-11-09
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lipidic cubic phase serial femtosecond crystallography structure of a photosynthetic reaction centre.
Acta Crystallogr D Struct Biol, 78, 2022
3RSM
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BU of 3rsm by Molmil
Crystal structure of S108C mutant of PMM/PGM
分子名称: PHOSPHATE ION, Phosphomannomutase/phosphoglucomutase, ZINC ION
著者Akella, A, Anbanandam, A, Kelm, A, Wei, Y, Mehra-Chaudhary, R, Beamer, L, Van Doren, S.
登録日2011-05-02
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Solution NMR of a 463-residue phosphohexomutase: domain 4 mobility, substates, and phosphoryl transfer defect.
Biochemistry, 51, 2012
1HWV
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BU of 1hwv by Molmil
MOLECULAR TOPOLOGY OF POLYCYCLIC AROMATIC CARCINOGENS DETERMINES DNA ADDUCT CONFORMATION: A LINK TO TUMORIGENIC ACTIVITY
分子名称: (1S)-1,2,3,4-TETRAHYDRO-BENZO[C]PHENANTHRENE-2,3,4-TRIOL, 5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'
著者Patel, D.J, Lin, C.H, Geacintov, N.E, Broyde, S, Huang, X, Kolbanovskii, A, Hingerty, B.E, Amin, S.
登録日2001-01-10
公開日2001-03-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Molecular topology of polycyclic aromatic carcinogens determines DNA adduct conformation: a link to tumorigenic activity.
J.Mol.Biol., 306, 2001
1HX4
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BU of 1hx4 by Molmil
MOLECULAR TOPOLOGY OF POLYCYCLIC AROMATIC CARCINOGENS DETERMINES DNA ADDUCT CONFORMATION: A LINK TO TUMORIGENIC ACTIVITY
分子名称: (1R)-1,2,3,4-TETRAHYDRO-BENZO[C]PHENANTHRENE-2,3,4-TRIOL, 5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'
著者Patel, D.J, Lin, C.H, Geacintov, N.E, Broyde, S, Huang, X, Kolbanovskii, A, Hingerty, B.E, Amin, S.
登録日2001-01-11
公開日2001-03-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Molecular topology of polycyclic aromatic carcinogens determines DNA adduct conformation: a link to tumorigenic activity.
J.Mol.Biol., 306, 2001
1YQY
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BU of 1yqy by Molmil
Structure of B. Anthrax Lethal factor in complex with a hydroxamate inhibitor
分子名称: (2R)-2-{[(4-FLUORO-3-METHYLPHENYL)SULFONYL]AMINO}-N-HYDROXY-2-TETRAHYDRO-2H-PYRAN-4-YLACETAMIDE, Lethal factor, ZINC ION
著者Shoop, W.L, Xiong, Y, Wiltsie, J, Woods, A, Guo, J, Pivnichny, J.V, Felcetto, T, Michael, B.F, Bansal, A.
登録日2005-02-02
公開日2005-05-31
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Anthrax lethal factor inhibition.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6WQZ
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Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
分子名称: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
著者Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
登録日2020-04-29
公開日2020-07-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
6WR4
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Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
分子名称: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
著者Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
登録日2020-04-29
公開日2020-07-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
5IYE
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BU of 5iye by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3'), ZINC ION
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.694 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYG
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Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
5IYJ
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BU of 5iyj by Molmil
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
著者Karthik, S, Thirugnanasambandam, A, Mandal, P.K, Gautham, N.
登録日2016-03-24
公開日2017-03-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 angstrom resolution.
Nucleosides Nucleotides Nucleic Acids, 36, 2017
1GUW
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BU of 1guw by Molmil
STRUCTURE OF THE CHROMODOMAIN FROM MOUSE HP1beta IN COMPLEX WITH THE LYSINE 9-METHYL HISTONE H3 N-TERMINAL PEPTIDE, NMR, 25 STRUCTURES
分子名称: CHROMOBOX PROTEIN HOMOLOG 1, HISTONE H3.1
著者Nielsen, P.R, Nietlispach, D, Mott, H.R, Callaghan, J.M, Bannister, A, Kouzarides, T, Murzin, A.G, Murzina, N.V, Laue, E.D.
登録日2002-02-01
公開日2002-03-12
最終更新日2018-01-17
実験手法SOLUTION NMR
主引用文献Structure of the Hp1 Chromodomain Bound to Histone H3 Methylated at Lysine 9
Nature, 416, 2002
8P8M
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Yeast 60S ribosomal subunit, RPL39 deletion
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M.
登録日2023-06-01
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Yeast 60S ribosomal subunit, RPL39 deletion
To Be Published
2MIW
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BU of 2miw by Molmil
Nuclear magnetic resonance studies of N2-guanine adducts derived from the tumorigen dibenzo[a,l]pyrene in DNA: Impact of adduct stereochemistry, size, and local DNA structure on solution conformations
分子名称: (11R,12R,13R)-11,12,13,14-tetrahydronaphtho[1,2,3,4-pqr]tetraphene-11,12,13-triol, DNA_(5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3'), DNA_(5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3')
著者Rodriguez, F.A, Liu, Z, Lin, C.H, Ding, S, Cai, Y, Kolbanovskiy, A, Kolbanovskiy, M, Amin, S, Broyde, S, Geacintov, N.E.
登録日2013-12-20
公開日2014-04-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Studies of an N(2)-Guanine Adduct Derived from the Tumorigen Dibenzo[a,l]pyrene in DNA: Impact of Adduct Stereochemistry, Size, and Local DNA Sequence on Solution Conformations.
Biochemistry, 53, 2014

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