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5L9T
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BU of 5l9t by Molmil
Model of human Anaphase-promoting complex/Cyclosome (APC/C-CDH1) with E2 UBE2S poised for polyubiquitination where UBE2S, APC2, and APC11 are modeled into low resolution density
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
著者Brown, N.G, VanderLinden, R, Dube, P, Haselbach, D, Peters, J.M, Stark, H, Schulman, B.A.
登録日2016-06-11
公開日2016-10-26
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C.
Cell, 165, 2016
4V98
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BU of 4v98 by Molmil
The 8S snRNP Assembly Intermediate
分子名称: CG10419, Icln, LD23602p, ...
著者Grimm, C, Pelz, J.P, Schindelin, H, Diederichs, K, Kuper, J, Kisker, C.
登録日2012-05-15
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis of Assembly Chaperone- Mediated snRNP Formation.
Mol.Cell, 49, 2013
1C2W
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BU of 1c2w by Molmil
23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION
分子名称: 23S RIBOSOMAL RNA
著者Brimacombe, R, Mueller, F.
登録日1999-07-28
公開日2000-04-10
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution.
J.Mol.Biol., 298, 2000
5O9Z
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BU of 5o9z by Molmil
Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), ...
著者Bertram, K, Kastner, B.
登録日2017-06-20
公開日2017-08-16
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Cell, 170, 2017
4HZK
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BU of 4hzk by Molmil
Crystal structure of free CRM1 (crystal form 2)
分子名称: CRM1 Nuclear transport receptor
著者Monecke, T, Neumann, P, Dickmanns, A, Ficner, R.
登録日2012-11-15
公開日2013-01-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for cooperativity of CRM1 export complex formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
5E0Q
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BU of 5e0q by Molmil
Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
分子名称: Anti-Nup98 Nanobody TP377, Nuclear pore complex protein Nup98-Nup96
著者Pleiner, T, Trakhanov, S, Goerlich, D.
登録日2015-09-29
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Nanobodies: site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation.
Elife, 4, 2015
4CT2
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BU of 4ct2 by Molmil
Human PDK1-PKCzeta Kinase Chimera
分子名称: 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1, ADENOSINE-5'-TRIPHOSPHATE, DITHIANE DIOL, ...
著者Schulze, J.O, Zhang, H, Lopez-Garcia, L.A, Biondi, R.M.
登録日2014-03-11
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Molecular Mechanism of Regulation of the Atypical Protein Kinase C by N-Terminal Domains and an Allosteric Small Compound.
Chem.Biol., 21, 2014
4CT1
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BU of 4ct1 by Molmil
Human PDK1-PKCzeta Kinase Chimera in Complex with Allosteric Compound PS315 Bound to the PIF-Pocket
分子名称: (2Z)-3-(biphenyl-4-yl)-5-(4-chlorophenyl)pent-2-enoic acid, 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Schulze, J.O, Zhang, H, Lopez-Garcia, L.A, Biondi, R.M.
登録日2014-03-11
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular Mechanism of Regulation of the Atypical Protein Kinase C by N-Terminal Domains and an Allosteric Small Compound.
Chem.Biol., 21, 2014
4F7U
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BU of 4f7u by Molmil
The 6S snRNP assembly intermediate
分子名称: HEXAETHYLENE GLYCOL, Methylosome subunit pICln, Small nuclear ribonucleoprotein E, ...
著者Grimm, C, Pelz, J.P.
登録日2012-05-16
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Structural Basis of Assembly Chaperone- Mediated snRNP Formation.
Mol.Cell, 49, 2013
4FGV
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BU of 4fgv by Molmil
Crystal structure of free CRM1 (crystal form 1)
分子名称: Chromosome region maintenance 1 (CRM1) or Exportin 1 (Xpo1)
著者Monecke, T, Neumann, P, Dickmanns, A, Ficner, R.
登録日2012-06-05
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.941 Å)
主引用文献Structural basis for cooperativity of CRM1 export complex formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
7QRI
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BU of 7qri by Molmil
Regulatory domain dimer of tryptophan hydroxylase 2 in complex with L-Phe
分子名称: PHENYLALANINE, Tryptophan 5-hydroxylase 2
著者Vedel, I.M, Prestel, A, Harris, P, Peters, G.H.J, Kragelund, B.B.
登録日2022-01-11
公開日2023-05-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structural characterization of human tryptophan hydroxylase 2 reveals that L-Phe is superior to L-Trp as the regulatory domain ligand.
Structure, 31, 2023
6ZYM
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BU of 6zym by Molmil
Human C Complex Spliceosome - High-resolution CORE
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Cell division cycle 5-like protein, Corepressor interacting with RBPJ 1, ...
著者Bertram, K, Kastner, B.
登録日2020-08-02
公開日2020-10-14
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome.
Mol.Cell, 80, 2020
7A5P
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BU of 7a5p by Molmil
Human C Complex Spliceosome - Medium-resolution PERIPHERY
分子名称: Cell division cycle 5-like protein, Crooked neck-like protein 1, Eukaryotic initiation factor 4A-III, ...
著者Bertram, K, Kastner, B.
登録日2020-08-21
公開日2020-10-14
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome.
Mol.Cell, 80, 2020
3R3L
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BU of 3r3l by Molmil
Structure of NP protein from Lassa AV strain
分子名称: MANGANESE (II) ION, Nucleoprotein, ZINC ION
著者Perbandt, M, Brunotte, L, Gunther, S, Betzel, C.
登録日2011-03-16
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.449 Å)
主引用文献Structure of the Lassa virus nucleoprotein revealed by X-ray crystallography, small-angle X-ray scattering, and electron microscopy.
J.Biol.Chem., 286, 2011
6TBE
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BU of 6tbe by Molmil
LC3A in complex with (3R,4S,5R,6R)-5-hydroxy-6-((4-hydroxy-3-(4-hydroxy-3-isopentylbenzamido)-8-methyl-2-oxo-2H-chromen-7-yl)oxy)-3-methoxy-2,2-dimethyltetrahydro-2H-pyran-4-yl carbamate
分子名称: 1,2-ETHANEDIOL, Microtubule-associated proteins 1A/1B light chain 3A, NOVOBIOCIN
著者Kramer, J.S, Pogoryelov, D, Hartmann, M, Chaikuad, A, Proschak, E.
登録日2019-11-01
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67008042 Å)
主引用文献Demonstrating Ligandability of the LC3A and LC3B Adapter Interface.
J.Med.Chem., 64, 2021
6NXL
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BU of 6nxl by Molmil
Ubiquitin binding variants
分子名称: Polyubiquitin-B
著者Miller, D.J, Watson, E.R.
登録日2019-02-08
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site.
Proc.Natl.Acad.Sci.USA, 116, 2019
6NXK
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BU of 6nxk by Molmil
Ubiquitin binding variants
分子名称: Anaphase-promoting complex subunit 2, Polyubiquitin-C
著者Miller, D.J, Watson, E.R.
登録日2019-02-08
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OB1
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BU of 6ob1 by Molmil
Structure of WHB in complex with Ubiquitin Variant
分子名称: Anaphase-promoting complex subunit 2, Ubiquitin
著者Edmond, R.W, Grace, C.R.
登録日2019-03-19
公開日2019-08-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site.
Proc.Natl.Acad.Sci.USA, 116, 2019
2F9J
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BU of 2f9j by Molmil
3.0 angstrom resolution structure of a Y22M mutant of the spliceosomal protein p14 bound to a region of SF3b155
分子名称: Pre-mRNA branch site protein p14, Splicing factor 3B subunit 1
著者Schellenberg, M.J, MacMillan, A.M.
登録日2005-12-06
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a core spliceosomal protein interface
Proc.Natl.Acad.Sci.Usa, 103, 2006
2F9D
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BU of 2f9d by Molmil
2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of SF3b155
分子名称: Pre-mRNA branch site protein p14, Splicing factor 3B subunit 1
著者Schellenberg, M.J, Edwards, R.A, Ritchie, D.B, Glover, J.N.M, Macmillan, A.M.
登録日2005-12-05
公開日2006-01-24
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a core spliceosomal protein interface
Proc.Natl.Acad.Sci.Usa, 103, 2006
5JG6
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BU of 5jg6 by Molmil
APC11-Ubv shows role of noncovalent RING-Ubiquitin interactions in processive multiubiquitination and Ubiquitin chain elongation by APC/C
分子名称: Anaphase-promoting complex subunit 11, Polyubiquitin-B, ZINC ION
著者Brown, N.G, Zhang, W, Yu, S, Miller, D.J, Sidhu, S.S, Schulman, B.A.
登録日2016-04-19
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.0013 Å)
主引用文献Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C.
Cell, 165, 2016
2QA5
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BU of 2qa5 by Molmil
Crystal structure of Sept2 G-domain
分子名称: GUANOSINE-5'-DIPHOSPHATE, Septin-2
著者Sirajuddin, M, Wittinghofer, A.
登録日2007-06-14
公開日2007-08-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural insight into filament formation by mammalian septins.
Nature, 449, 2007
2QAG
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BU of 2qag by Molmil
Crystal structure of human septin trimer 2/6/7
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Septin-2, ...
著者Sirajuddin, M.
登録日2007-06-15
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural insight into filament formation by mammalian septins.
Nature, 449, 2007
5MQF
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BU of 5mqf by Molmil
Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ...
著者Bertram, K, Hartmuth, K, Kastner, B.
登録日2016-12-20
公開日2017-03-22
最終更新日2018-11-21
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature, 542, 2017
5LQW
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BU of 5lqw by Molmil
yeast activated spliceosome
分子名称: Pre-mRNA leakage protein 1, Pre-mRNA-processing protein 45, Pre-mRNA-splicing factor 8, ...
著者Rauhut, R, Luehrmann, R.
登録日2016-08-17
公開日2016-10-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Molecular architecture of the Saccharomyces cerevisiae activated spliceosome
Science, 6306, 2016

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