Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4IRR
DownloadVisualize
BU of 4irr by Molmil
Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Thymidylate synthase
著者Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
登録日2013-01-15
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP
To be Published
4ISW
DownloadVisualize
BU of 4isw by Molmil
Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
著者Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
登録日2013-01-17
公開日2013-12-11
最終更新日2014-01-15
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Crystal structure of phosphoramide-phosphorylated thymidylate synthase reveals pSer127, reflecting probably pHis to pSer phosphotransfer.
Bioorg.Chem., 52C, 2013
3AYU
DownloadVisualize
BU of 3ayu by Molmil
Crystal structure of MMP-2 active site mutant in complex with APP-drived decapeptide inhibitor
分子名称: 72 kDa type IV collagenase, Amyloid beta A4 protein, CALCIUM ION, ...
著者Hashimoto, H, Takeuchi, T, Komatsu, K, Miyazaki, K, Sato, M, Higashi, S.
登録日2011-05-17
公開日2011-08-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for matrix metalloproteinase-2 (MMP-2)-selective inhibitory action of {beta}-amyloid precursor protein-derived inhibitor
J.Biol.Chem., 2011
4JWV
DownloadVisualize
BU of 4jwv by Molmil
Crystal Structure of putative short chain enoyl-CoA hydratase from Novosphingobium aromaticivorans DSM 12444
分子名称: Short chain enoyl-CoA hydratase
著者Cooper, D.R, Mikolajczak, K, Cymborowski, M, Grabowski, M, Ahmed, M, Stead, M, Hillerich, B, Seidel, R, Zimmerman, M, Bonanno, J.B, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-03-27
公開日2013-05-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of putative short chain enoyl-CoA hydratase from Novosphingobium aromaticivorans DSM 12444
To be Published
4JYL
DownloadVisualize
BU of 4jyl by Molmil
Crystal structure of enoyl-CoA hydratase from Thermoplasma volcanium GSS1
分子名称: CHLORIDE ION, Enoyl-CoA hydratase, SULFATE ION
著者Shabalin, I.G, Cooper, D.R, Majorek, K.A, Mikolajczak, K, Porebski, P.J, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-03-29
公開日2013-04-17
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Crystal structure of enoyl-CoA hydratase from Thermoplasma volcanium GSS1
To be Published
2DGA
DownloadVisualize
BU of 2dga by Molmil
Crystal structure of hexameric beta-glucosidase in wheat
分子名称: Beta-glucosidase, GLYCEROL, SULFATE ION
著者Sue, M, Yamazaki, K, Miyamoto, T, Yajima, S.
登録日2006-03-10
公開日2006-07-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular and Structural Characterization of Hexameric beta-D-Glucosidases in Wheat and Rye.
Plant Physiol., 141, 2006
1UHT
DownloadVisualize
BU of 1uht by Molmil
Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
分子名称: expressed protein
著者Tomizawa, T, Inoue, M, Koshiba, S, Hayashi, F, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Matsuda, T, Seki, E, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Shinozaki, K, Seki, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-07-10
公開日2004-01-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of The FHA Domain of Arabidopsis thaliana Hypothetical Protein
To be Published
1G0C
DownloadVisualize
BU of 1g0c by Molmil
ALKALINE CELLULASE K CATALYTIC DOMAIN-CELLOBIOSE COMPLEX
分子名称: ACETIC ACID, CADMIUM ION, ENDOGLUCANASE, ...
著者Shirai, T, Ishida, H, Noda, J, Yamane, T, Ozaki, K, Hakamada, Y, Ito, S.
登録日2000-10-05
公開日2001-08-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of alkaline cellulase K: insight into the alkaline adaptation of an industrial enzyme.
J.Mol.Biol., 310, 2001
1G01
DownloadVisualize
BU of 1g01 by Molmil
ALKALINE CELLULASE K CATALYTIC DOMAIN
分子名称: ACETIC ACID, CADMIUM ION, ENDOGLUCANASE
著者Shirai, T, Ishida, H, Noda, J, Yamane, T, Ozaki, K, Hakamada, Y, Ito, S.
登録日2000-10-05
公開日2001-08-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of alkaline cellulase K: insight into the alkaline adaptation of an industrial enzyme.
J.Mol.Biol., 310, 2001
2ZWN
DownloadVisualize
BU of 2zwn by Molmil
Crystal structure of the novel two-domain type laccase from a metagenome
分子名称: CHLORIDE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Komori, H, Miyazaki, K, Higuchi, Y.
登録日2008-12-17
公開日2009-04-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray structure of a two-domain type laccase: a missing link in the evolution of multi-copper proteins
Febs Lett., 583, 2009
6R2N
DownloadVisualize
BU of 6r2n by Molmil
Crystal structure of KlGlk1 glucokinase from Kluyveromyces lactis
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Glucokinase-1
著者Zak, K, Wator, E, Grudnik, P.
登録日2019-03-18
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Crystal Structure of Kluyveromyces lactis Glucokinase ( Kl Glk1).
Int J Mol Sci, 20, 2019
8TG8
DownloadVisualize
BU of 8tg8 by Molmil
Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 3
分子名称: Recombination protein bet, TRP-MET-ASP-PHE-ASP-ASP-ASP-ILE-PRO-PHE
著者Bell, C.E.
登録日2023-07-12
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.576 Å)
主引用文献Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein.
J.Mol.Biol., 436, 2024
8TFU
DownloadVisualize
BU of 8tfu by Molmil
Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 1
分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet
著者Bell, C.E.
登録日2023-07-11
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.482 Å)
主引用文献Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein.
J.Mol.Biol., 436, 2024
8TGC
DownloadVisualize
BU of 8tgc by Molmil
Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 4
分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet
著者Bell, C.E.
登録日2023-07-12
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.484 Å)
主引用文献Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein.
J.Mol.Biol., 436, 2024
8TG7
DownloadVisualize
BU of 8tg7 by Molmil
Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 2
分子名称: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet
著者Bell, C.E.
登録日2023-07-12
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.775 Å)
主引用文献Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein.
J.Mol.Biol., 436, 2024
7Z0J
DownloadVisualize
BU of 7z0j by Molmil
human PEX13 SH3 domain in complex with internal FxxxF motif
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13
著者Gaussmann, S, Zak, K, Kreisz, N, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7Z0I
DownloadVisualize
BU of 7z0i by Molmil
human PEX13 SH3 domain
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13, ZINC ION
著者Gaussmann, S, Zak, K, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
6R73
DownloadVisualize
BU of 6r73 by Molmil
Structure of IMP-13 metallo-beta-lactamase complexed with hydrolysed meropenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-(dimethylcarbamoy l)pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, Beta-lactamase, ZINC ION
著者Softley, C.A, Zak, K, Kolonko, M, Sattler, M, Popowicz, G.
登録日2019-03-28
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Molecular Recognition Mechanism of IMP-13 Metallo-beta-Lactamase.
Antimicrob.Agents Chemother., 64, 2020
8R41
DownloadVisualize
BU of 8r41 by Molmil
Structure of CHI3L1 in complex with inhibitor 1
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-10
公開日2024-03-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8R4X
DownloadVisualize
BU of 8r4x by Molmil
Structure of Chitinase-3-like protein 1 in complex with inhibitor 30
分子名称: (2~{S},5~{S})-4-[1-(4-chloranylpyridin-2-yl)piperidin-4-yl]-5-[(4-chlorophenyl)methyl]-2-methyl-morpholine, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-14
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8R42
DownloadVisualize
BU of 8r42 by Molmil
Structure of CHI3L1 in complex with inhibititor 2
分子名称: 1,2-ETHANEDIOL, 2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-10
公開日2024-03-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8AUP
DownloadVisualize
BU of 8aup by Molmil
Structure of hARG1 with a novel inhibitor.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-[(1~{R},3~{R},4~{S})-3-azanyl-3-carboxy-4-[(dimethylamino)methyl]cyclohexyl]ethyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, Arginase-1, ...
著者Napiorkowska-Gromadzka, A, Nowak, E, Nowotny, M.
登録日2022-08-25
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Arginase 1/2 Inhibitor OATD-02: From Discovery to First-in-man Setup in Cancer Immunotherapy.
Mol.Cancer Ther., 22, 2023
1IDM
DownloadVisualize
BU of 1idm by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOOP-DELETED CHIMERA
分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE
著者Sakurai, M, Ohzeki, M, Moriyama, H, Sato, M, Tanaka, N.
登録日1995-05-19
公開日1995-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a loop-deleted variant of 3-isopropylmalate dehydrogenase from Thermus thermophilus: an internal reprieve tolerance mechanism.
Acta Crystallogr.,Sect.D, 52, 1996
7BV9
DownloadVisualize
BU of 7bv9 by Molmil
The NMR structure of the BEN domain from human NAC1
分子名称: Nucleus accumbens-associated protein 1
著者Nagata, T, Kobayashi, N, Nakayama, N, Obayashi, E, Urano, T.
登録日2020-04-09
公開日2021-02-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Nucleus Accumbens-Associated Protein 1 Binds DNA Directly through the BEN Domain in a Sequence-Specific Manner.
Biomedicines, 8, 2020
3JRS
DownloadVisualize
BU of 3jrs by Molmil
Crystal structure of (+)-ABA-bound PYL1
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Putative uncharacterized protein At5g46790
著者Miyazono, K, Miyakawa, T, Sawano, Y, Kubota, K, Tanokura, M.
登録日2009-09-08
公開日2009-11-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis of abscisic acid signalling
Nature, 462, 2009

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon