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4NKG
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Crystal structure of SspH1 LRR domain in complex PKN1 HR1b domain
分子名称: E3 ubiquitin-protein ligase sspH1, HEXANE-1,6-DIOL, Serine/threonine-protein kinase N1
著者Keszei, A.F.A, Xiaojing, T, Mccormick, C, Zeqiraj, E, Rohde, J.R, Tyers, M, Sicheri, F.
登録日2013-11-12
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of an SspH1-PKN1 Complex Reveals the Basis for Host Substrate Recognition and Mechanism of Activation for a Bacterial E3 Ubiquitin Ligase.
Mol.Cell.Biol., 34, 2014
4MDK
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BU of 4mdk by Molmil
Cdc34-ubiquitin-CC0651 complex
分子名称: 4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acid, Ubiquitin, Ubiquitin-conjugating enzyme E2 R1
著者Ceccarelli, D.F, Orlicky, S, Tyers, M, Sicheri, F.
登録日2013-08-22
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6095 Å)
主引用文献E2 enzyme inhibition by stabilization of a low-affinity interface with ubiquitin.
Nat.Chem.Biol., 10, 2014
4NKH
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BU of 4nkh by Molmil
Crystal structure of SspH1 LRR domain
分子名称: E3 ubiquitin-protein ligase sspH1
著者Keszei, A.F.A, Xiaojing, T, Mccormick, C, Zeqiraj, E, Rohde, J.R, Tyers, M, Sicheri, F.
登録日2013-11-12
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure of an SspH1-PKN1 Complex Reveals the Basis for Host Substrate Recognition and Mechanism of Activation for a Bacterial E3 Ubiquitin Ligase.
Mol.Cell.Biol., 34, 2014
4O1O
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BU of 4o1o by Molmil
Crystal Structure of RNase L in complex with 2-5A
分子名称: Ribonuclease L, [[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-4-[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-4-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate
著者Huang, H, Zeqiraj, E, Ceccarelli, D.F, Sicheri, F.
登録日2013-12-16
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Dimeric structure of pseudokinase RNase L bound to 2-5A reveals a basis for interferon-induced antiviral activity.
Mol.Cell, 53, 2014
4O1P
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BU of 4o1p by Molmil
Crystal Structure of RNase L in complex with 2-5A and AMP-PNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribonuclease L, ...
著者Huang, H, Zeqiraj, E, Ceccarelli, D.F, Sicheri, F.
登録日2013-12-16
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Dimeric structure of pseudokinase RNase L bound to 2-5A reveals a basis for interferon-induced antiviral activity.
Mol.Cell, 53, 2014
7KJU
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BU of 7kju by Molmil
Cgi121-tRNA complex
分子名称: MAGNESIUM ION, RNA (75-MER)
著者Ceccarelli, D.F, Beenstock, J, Wan, L.C.K, Sicheri, F.
登録日2020-10-26
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献A substrate binding model for the KEOPS tRNA modifying complex.
Nat Commun, 11, 2020
4PL4
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BU of 4pl4 by Molmil
Crystal structure of murine IRE1 in complex with OICR464 inhibitor
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, 2-methoxy-6-methyl-4-(4-methyl-3,4-dihydro-2H-1,4-benzoxazin-7-yl)phenol, ADENOSINE-5'-DIPHOSPHATE, ...
著者Sanches, M, Duffy, N, Talukdar, M, Thevakumaran, N, Chiovitti, D, Al-awar, R, Patterson, J.B, Sicheri, F.
登録日2014-05-16
公開日2014-09-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and mechanism of action of the hydroxy-aryl-aldehyde class of IRE1 endoribonuclease inhibitors.
Nat Commun, 5, 2014
7LUO
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BU of 7luo by Molmil
N-terminus of Skp2 bound to Cyclin A
分子名称: S-phase kinase-associated protein 2,Cyclin-A2, Skp2 Motif 1 uncharacterized fragment 1, Skp2 Motif 1 uncharacterized fragment 2
著者Kelso, S, Ceccarelli, D.F, Sicheri, F.
登録日2021-02-22
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Bipartite binding of the N terminus of Skp2 to cyclin A.
Structure, 29, 2021
2KIS
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BU of 2kis by Molmil
Solution structure of CA150 FF1 domain and FF1-FF2 interdomain linker
分子名称: Transcription elongation regulator 1
著者Murphy, J.M, Hansen, D, Wiesner, S, Muhandiram, D, Borg, M, Smith, M.J, Sicheri, F, Kay, L.E, Forman-Kay, J.D, Pawson, T.
登録日2009-05-08
公開日2009-09-08
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural studies of FF domains of the transcription factor CA150 provide insights into the organization of FF domain tandem arrays.
J.Mol.Biol., 393, 2009
4PL5
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BU of 4pl5 by Molmil
Crystal structure of murine IRE1 in complex with OICR573 inhibitor
分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, 3-methoxy-5-methyl-4'-(morpholin-4-yl)biphenyl-4-ol, ADENOSINE-5'-DIPHOSPHATE, ...
著者Sanches, M, Duffy, N, Talukdar, M, Thevakumaran, N, Chiovitti, D, Al-awar, R, Patterson, J.B, Sicheri, F.
登録日2014-05-16
公開日2014-09-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure and mechanism of action of the hydroxy-aryl-aldehyde class of IRE1 endoribonuclease inhibitors.
Nat Commun, 5, 2014
4QLB
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BU of 4qlb by Molmil
Structural Basis for the Recruitment of Glycogen Synthase by Glycogenin
分子名称: GLYCEROL, Probable glycogen [starch] synthase, Protein GYG-1, ...
著者Zeqiraj, E, Judd, A, Sicheri, F.
登録日2014-06-11
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the recruitment of glycogen synthase by glycogenin.
Proc.Natl.Acad.Sci.USA, 111, 2014
2HJN
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BU of 2hjn by Molmil
Structural and functional analysis of Saccharomyces cerevisiae Mob1
分子名称: Maintenance of ploidy protein MOB1, SULFATE ION, ZINC ION
著者Mrkobrada, S, Ceccarelli, D.F, Sicheri, F.
登録日2006-06-30
公開日2006-09-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Functional Analysis of Saccharomyces cerevisiae Mob1.
J.Mol.Biol., 362, 2006
4PDS
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BU of 4pds by Molmil
Crystal structure of Rad53 kinase domain and SCD2 in complex with AMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase RAD53
著者Ho, C.S, Wybenga-Groot, L.E, Ceccarelli, D.F, Sicheri, F.
登録日2014-04-21
公開日2014-05-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of Rad53 kinase activation by dimerization and activation segment exchange.
Cell Signal., 26, 2014
7LUL
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BU of 7lul by Molmil
Structure of the MM2 Erbin PDZ variant in complex with a high-affinity peptide
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Singer, A.U, Teyra, J, McLaughlin, M, Ernst, A, Sicheri, F, Sidhu, S.S.
登録日2021-02-22
公開日2021-07-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Comprehensive Assessment of the Relationship Between Site -2 Specificity and Helix alpha 2 in the Erbin PDZ Domain.
J.Mol.Biol., 433, 2021
4PL3
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BU of 4pl3 by Molmil
Crystal structure of murine IRE1 in complex with MKC9989 inhibitor
分子名称: 7-hydroxy-6-methoxy-3-[2-(2-methoxyethoxy)ethyl]-4,8-dimethyl-2H-chromen-2-one, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Sanches, M, Duffy, N, Talukdar, M, Thevakumaran, N, Chiovitti, D, Al-awar, R, Patterson, J.B, Sicheri, F.
登録日2014-05-16
公開日2014-09-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and mechanism of action of the hydroxy-aryl-aldehyde class of IRE1 endoribonuclease inhibitors.
Nat Commun, 5, 2014
7KJT
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BU of 7kjt by Molmil
KEOPS tRNA modifying sub-complex of archaeal Cgi121 and tRNA
分子名称: RNA (70-MER), Regulatory protein Cgi121
著者Ceccarelli, D.F, Beenstock, J, Mao, D.Y.L, Sicheri, F.
登録日2020-10-26
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献A substrate binding model for the KEOPS tRNA modifying complex.
Nat Commun, 11, 2020
7M3Q
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BU of 7m3q by Molmil
Structure of the Smurf2 HECT Domain with a High Affinity Ubiquitin Variant (UbV)
分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, ...
著者Chowdhury, A, Singer, A.U, Ogunjimi, A.A, Teyra, J, Zhang, W, Sicheri, F, Sidhu, S.S.
登録日2021-03-18
公開日2021-04-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Smurf2 HECT Domain with a High Affinity Ubiquitin Variant (UbV)
To be published
4PDP
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BU of 4pdp by Molmil
Crystal structure of Rad53 kinase domain and SCD2
分子名称: Serine/threonine-protein kinase RAD53
著者Wybenga-Groot, L.E, Ho, C.S, Ceccarelli, D.F, Sicheri, F.
登録日2014-04-19
公開日2014-05-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.591 Å)
主引用文献Structural basis of Rad53 kinase activation by dimerization and activation segment exchange.
Cell Signal., 26, 2014
2K8Y
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BU of 2k8y by Molmil
Solution NMR Structure of Cgi121 from Methanococcus jannaschii. Northeast Structural Genomics Consortium Target MJ0187
分子名称: Uncharacterized protein MJ0187
著者Rumpel, S, Fares, C, Neculai, D, Arrowsmith, C, Montelione, G.T, Sicheri, F, Northeast Structural Genomics Consortium (NESG)
登録日2008-09-25
公開日2008-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Atomic structure of the KEOPS complex: an ancient protein kinase-containing molecular machine.
Mol.Cell, 32, 2008
2JQZ
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BU of 2jqz by Molmil
Solution Structure of the C2 domain of human Smurf2
分子名称: E3 ubiquitin-protein ligase SMURF2
著者Wiesner, S, Ogunjimi, A.A, Wang, H, Rotin, D, Sicheri, F, Wrana, J.L, Forman-Kay, J.D.
登録日2007-06-15
公開日2007-09-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Autoinhibition of the HECT-Type Ubiquitin Ligase Smurf2 through Its C2 Domain
Cell(Cambridge,Mass.), 130, 2007
2F8K
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BU of 2f8k by Molmil
Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
分子名称: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
著者Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
登録日2005-12-02
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
2HEN
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BU of 2hen by Molmil
Crystal Structure of the EphB2 Receptor Kinase domain in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ephrin type-B receptor 2, MAGNESIUM ION
著者Wybenga-Groot, L.E, Sicheri, F, Pawson, T.
登録日2006-06-21
公開日2007-02-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases
EMBO J., 25, 2006
2HEL
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BU of 2hel by Molmil
Crystal structure of a mutant EphA4 kinase domain (Y742A)
分子名称: Eph receptor A4
著者Wybenga-Groot, L.E, Sicheri, F, Pawson, T.
登録日2006-06-21
公開日2007-02-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases.
EMBO J., 25, 2006
3RZ3
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BU of 3rz3 by Molmil
Human Cdc34 E2 in complex with CC0651 inhibitor
分子名称: 4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acid, Ubiquitin-conjugating enzyme E2 R1
著者Ceccarelli, D.F, Webb, D.R, Sicheri, F.
登録日2011-05-11
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An allosteric inhibitor of the human cdc34 ubiquitin conjugating enzyme
Cell(Cambridge,Mass.), 145, 2011
8TTQ
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BU of 8ttq by Molmil
Cryo-EM structure of the inner MKLN1 dimer from an autoinhibited MKLN1 tetramer
分子名称: Muskelin
著者Chana, C.K, Keszei, A.F.A, Sicheri, F.
登録日2023-08-14
公開日2024-09-11
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献FAM72A degrades UNG2 through the GID/CTLH complex to promote mutagenic repair during antibody maturation.
Nat Commun, 15, 2024

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