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2LI5
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BU of 2li5 by Molmil
NMR structure of Atg8-Atg7C30 complex
分子名称: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7
著者Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F.
登録日2011-08-23
公開日2011-11-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
2K6Q
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BU of 2k6q by Molmil
LC3 p62 complex structure
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, p62_peptide from Sequestosome-1
著者Noda, N, Kumeta, H, Nakatogawa, H, Satoo, K, Adachi, W, Ishii, J, Fujioka, Y, Ohsumi, Y, Inagaki, F.
登録日2008-07-17
公開日2008-09-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of target recognition by ATG8/LC3 during selective autophagy
To be Published
2KWC
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BU of 2kwc by Molmil
The NMR structure of the autophagy-related protein Atg8
分子名称: Autophagy-related protein 8
著者Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F.
登録日2010-04-05
公開日2010-05-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
3VX7
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BU of 3vx7 by Molmil
Crystal structure of Kluyveromyces marxianus Atg7NTD-Atg10 complex
分子名称: E1, E2
著者Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F.
登録日2012-09-11
公開日2012-11-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.
Nat.Struct.Mol.Biol., 19, 2012
3VX6
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Crystal structure of Kluyveromyces marxianus Atg7NTD
分子名称: E1
著者Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F.
登録日2012-09-11
公開日2012-11-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.
Nat.Struct.Mol.Biol., 19, 2012
4YCL
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BU of 4ycl by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, MAGNESIUM ION, POTASSIUM ION, ...
著者Ogawa, H, Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2015-02-20
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2AGV
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BU of 2agv by Molmil
Crystal structure of the SR CA2+-ATPASE with BHQ and TG
分子名称: 2,5-DITERT-BUTYLBENZENE-1,4-DIOL, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Obara, K, Norimatsu, Y.
登録日2005-07-27
公開日2005-10-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inaugural Article: Structural role of countertransport revealed in Ca2+ pump crystal structure in the absence of Ca2+.
Proc.Natl.Acad.Sci.USA, 102, 2005
1KY4
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BU of 1ky4 by Molmil
S-Adenosylhomocysteine hydrolase refined with noncrystallographic restraints
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, S-adenosylhomocysteine hydrolase
著者Takata, Y, Takusagawa, F.
登録日2002-02-03
公開日2002-09-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Catalytic Mechanism of S-adenosylhomocysteine Hydrolase. Site-directed mutagenesis of Asp-130, Lys-185, Asp-189, and Asn-190.
J.Biol.Chem., 277, 2002
1KY5
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BU of 1ky5 by Molmil
D244E mutant S-Adenosylhomocysteine hydrolase refined with noncrystallographic restraints
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3'-OXO-ADENOSINE, S-adenosylhomocysteine hydrolase
著者Takata, Y, Takusagawa, F.
登録日2002-02-03
公開日2002-09-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Catalytic Mechanism of S-adenosylhomocysteine hydrolase. Site-directed mutagenesis of Asp-130, Lys-185, Asp-189, and Asn-190.
J.Biol.Chem., 277, 2002
1NBI
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BU of 1nbi by Molmil
Structure of R175K mutated glycine N-methyltransferase complexed with S-adenosylmethionine, R175K:SAM.
分子名称: Glycine N-methyltransferase, S-ADENOSYLMETHIONINE
著者Takata, Y, Takusagawa, F.
登録日2002-12-02
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Catalytic mechanism of glycine N-methyltransferase
Biochemistry, 42, 2003
1NBH
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Structure of glycine N-methyltransferase complexed with S-adenosylmethionine and acetate, GNMT:SAM:Ace
分子名称: ACETATE ION, Glycine N-methyltransferase, S-ADENOSYLMETHIONINE
著者Takata, Y, Takusagawa, F.
登録日2002-12-02
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Catalytic mechanism of glycine N-methyltransferase
Biochemistry, 42, 2003
1KHH
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BU of 1khh by Molmil
Crystal Structure of Guanidinoacetate Methyltransferase from Rat Liver: A Template Structure of Protein Arginine Methyltransferase
分子名称: Guanidinoacetate methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Takusagawa, F, Komoto, J.
登録日2001-11-30
公開日2001-12-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of guanidinoacetate methyltransferase from rat liver: a model structure of protein arginine methyltransferase.
J.Mol.Biol., 320, 2002
1P1C
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BU of 1p1c by Molmil
Guanidinoacetate Methyltransferase with Gd ion
分子名称: GADOLINIUM ION, Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Komoto, J, Takusagawa, F.
登録日2003-04-12
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Monoclinic guanidinoacetate methyltransferase and gadolinium ion-binding characteristics.
Acta Crystallogr.,Sect.D, 59, 2003
1P1B
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BU of 1p1b by Molmil
Guanidinoacetate methyltransferase
分子名称: Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Komoto, J, Takusagawa, F.
登録日2003-04-12
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Monoclinic guanidinoacetate methyltransferase and gadolinium ion-binding characteristics.
Acta Crystallogr.,Sect.D, 59, 2003
1IWO
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BU of 1iwo by Molmil
Crystal structure of the SR Ca2+-ATPase in the absence of Ca2+
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Toyoshima, C, Nomura, H.
登録日2002-05-26
公開日2002-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural changes in the calcium pump accompanying the dissociation of calcium
Nature, 418, 2002
2H5L
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BU of 2h5l by Molmil
S-Adenosylhomocysteine hydrolase containing NAD and 3-deaza-D-eritadenine
分子名称: (2R,3R)-4-(4-AMINO-1H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-2,3-DIHYDROXYBUTANOIC ACID, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yamada, T, Komoto, J, Takusagawa, F.
登録日2006-05-26
公開日2007-04-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and function of eritadenine and its 3-deaza analogues: Potent inhibitors of S-adenosylhomocysteine hydrolase and hypocholesterolemic agents.
Biochem.Pharm., 73, 2007
1KJU
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BU of 1kju by Molmil
Ca2+-ATPase in the E2 State
分子名称: Sarcoplasmic/endoplasmic reticulum calcium ATPase 1a
著者Xu, C, Rice, W.J, He, W, Stokes, D.L.
登録日2001-12-05
公開日2001-12-19
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献A structural model for the catalytic cycle of Ca(2+)-ATPase.
J.Mol.Biol., 316, 2002
2DQS
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BU of 2dqs by Molmil
Crystal structure of the calcium pump with amppcp in the absence of calcium
分子名称: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Norimatsu, Y, Tsueda, J.
登録日2006-05-29
公開日2007-06-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the calcium pump with a bound ATP analogue in the absence of calcium
To be Published
1D2C
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BU of 1d2c by Molmil
METHYLTRANSFERASE
分子名称: PROTEIN (GLYCINE N-METHYLTRANSFERASE)
著者Huang, Y, Takusagawa, F.
登録日1999-09-23
公開日1999-10-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanisms for auto-inhibition and forced product release in glycine N-methyltransferase: crystal structures of wild-type, mutant R175K and S-adenosylhomocysteine-bound R175K enzymes.
J.Mol.Biol., 298, 2000
2EAT
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BU of 2eat by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA and TG
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAU
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BU of 2eau by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA in the presence of curcumin
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, PHOSPHATIDYLETHANOLAMINE, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAR
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BU of 2ear by Molmil
P21 crystal of the SR CA2+-ATPase with bound TG
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
1D2H
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BU of 1d2h by Molmil
CRYSTAL STRUCTURE OF R175K MUTANT GLYCINE N-METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYLHOMOCYSTEINE
分子名称: GLYCINE N-METHYLTRANSFERASE, S-ADENOSYL-L-HOMOCYSTEINE
著者Huang, Y, Komoto, J, Takusagawa, F, Konishi, K, Takata, Y.
登録日1999-10-11
公開日1999-10-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mechanisms for auto-inhibition and forced product release in glycine N-methyltransferase: crystal structures of wild-type, mutant R175K and S-adenosylhomocysteine-bound R175K enzymes.
J.Mol.Biol., 298, 2000
1D2G
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CRYSTAL STRUCTURE OF R175K MUTANT GLYCINE N-METHYLTRANSFERASE FROM RAT LIVER
分子名称: GLYCINE N-METHYLTRANSFERASE
著者Huang, Y, Komoto, J, Takusagawa, F, Konishi, K, Takata, Y.
登録日1999-10-08
公開日1999-10-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanisms for auto-inhibition and forced product release in glycine N-methyltransferase: crystal structures of wild-type, mutant R175K and S-adenosylhomocysteine-bound R175K enzymes.
J.Mol.Biol., 298, 2000
1WPG
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BU of 1wpg by Molmil
Crystal structure of the SR CA2+-ATPase with MGF4
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Toyoshima, C, Nomura, H, Tsuda, T.
登録日2004-09-02
公開日2004-10-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues
Nature, 432, 2004

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