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IVY:A NEW FAMILY OF PROTEIN
分子名称:	INHIBITOR OF VERTEBRATE LYSOZYME, LYSOZYME C
著者	Abergel, C, Lembo, F, Byrne, D, Maza, C, Claverie, J.M.
登録日	2004-01-12
公開日	2004-01-14
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structure and Evolution of the Ivy Protein Family, Unexpected Lysozyme Inhibitors in Gram-Negative Bacteria. Proc.Natl.Acad.Sci.USA, 104, 2007

7DN8

Crystal structure of Salmonella effector SopF in complex with ARF1
分子名称:	ADP-ribosylation factor 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者	Ding, J, Shao, F.
登録日	2020-12-09
公開日	2021-12-15
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (2.6084 Å)
主引用文献	ARF GTPases activate Salmonella effector SopF to ADP-ribosylate host V-ATPase and inhibit endomembrane damage-induced autophagy. Nat.Struct.Mol.Biol., 29, 2022

7DN9

Crystal structure of Salmonella effector in complex with NAD and host co-factor ARF1
分子名称:	ADP-ribosylation factor 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者	Ding, J, Shao, F.
登録日	2020-12-09
公開日	2021-12-15
最終更新日	2024-05-29
実験手法	X-RAY DIFFRACTION (3.29 Å)
主引用文献	ARF GTPases activate Salmonella effector SopF to ADP-ribosylate host V-ATPase and inhibit endomembrane damage-induced autophagy. Nat.Struct.Mol.Biol., 29, 2022

4H3E

Crystal structure of a putative iron superoxide dismutase from Trypanosoma cruzi bound to iron
分子名称:	FE (II) ION, Superoxide dismutase
著者	Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日	2012-09-13
公開日	2012-09-26
最終更新日	2023-09-20
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Iron superoxide dismutases in eukaryotic pathogens: new insights from Apicomplexa and Trypanosoma structures. Acta Crystallogr F Struct Biol Commun, 71, 2015

3J2T

An improved model of the human apoptosome
分子名称:	ADENOSINE-5'-TRIPHOSPHATE, Apoptotic protease-activating factor 1, Cytochrome c, ...
著者	Yuan, S, Topf, M, Akey, C.W.
登録日	2012-12-23
公開日	2013-04-10
最終更新日	2018-07-18
実験手法	ELECTRON MICROSCOPY (9.5 Å)
主引用文献	Changes in apaf-1 conformation that drive apoptosome assembly. Biochemistry, 52, 2013

1CRZ

CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN
分子名称:	TOLB PROTEIN
著者	Abergel, C, Bouveret, E, Claverie, J.-M, Brown, K, Rigal, A, Lazdunski, C, Benedetti, H.
登録日	1999-08-16
公開日	2000-08-16
最終更新日	2018-01-24
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 A resolution. Structure Fold.Des., 7, 1999

1JV4

Crystal structure of recombinant major mouse urinary protein (rmup) at 1.75 A resolution
分子名称:	2-(SEC-BUTYL)THIAZOLE, CADMIUM ION, Major urinary protein 2
著者	Kuser, P.R, Franzoni, L, Ferrari, E, Spisni, A, Polikarpov, I.
登録日	2001-08-28
公開日	2001-12-05
最終更新日	2023-08-16
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	The X-ray structure of a recombinant major urinary protein at 1.75 A resolution. A comparative study of X-ray and NMR-derived structures. Acta Crystallogr.,Sect.D, 57, 2001

5I2V

NMR structure of a new G-quadruplex forming sequence within the KRAS proto-oncogene promoter region
分子名称:	DNA (5'-D(APGPGPGPCPGPGPTPGPTPGPGPGPAPAPTPAPGPGPGPAPA)-3'), POTASSIUM ION
著者	Salgado, G.F, Kerkour, A, Mergny, J.-L.
登録日	2016-02-09
公開日	2016-03-16
最終更新日	2024-06-19
実験手法	SOLUTION NMR
主引用文献	High-resolution three-dimensional NMR structure of the KRAS proto-oncogene promoter reveals key features of a G-quadruplex involved in transcriptional regulation. J. Biol. Chem., 292, 2017

2GHR

Crystal structure of homoserine o-succinyltransferase (NP_981826.1) from Bacillus cereus ATCC 10987 at 2.40 A resolution
分子名称:	Homoserine O-succinyltransferase, SULFATE ION
著者	Joint Center for Structural Genomics (JCSG)
登録日	2006-03-27
公開日	2006-04-11
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution Proteins, 68, 2007

2FNO

Crystal structure of a glutathione s-transferase (atu5508) from agrobacterium tumefaciens str. c58 at 2.00 A resolution
分子名称:	AGR_pAT_752p, THIOCYANATE ION
著者	Joint Center for Structural Genomics (JCSG)
登録日	2006-01-11
公開日	2006-02-14
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Comparative structural analysis of a novel glutathioneS-transferase (ATU5508) from Agrobacterium tumefaciens at 2.0 A resolution. Proteins, 65, 2006

2FG0

Crystal structure of a putative gamma-d-glutamyl-l-diamino acid endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.79 A resolution
分子名称:	COG0791: Cell wall-associated hydrolases (invasion-associated proteins), GLYCEROL
著者	Joint Center for Structural Genomics (JCSG)
登録日	2005-12-20
公開日	2006-01-10
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (1.79 Å)
主引用文献	Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure, 17, 2009

2EVR

CRYSTAL STRUCTURE OF A PUTATIVE GAMMA-D-GLUTAMYL-L-DIAMINO ACID ENDOPEPTIDASE (NPUN_R0659) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.60 A RESOLUTION
分子名称:	1,2-ETHANEDIOL, CHLORIDE ION, COG0791: Cell wall-associated hydrolases (invasion-associated proteins), ...
著者	Joint Center for Structural Genomics (JCSG)
登録日	2005-10-31
公開日	2005-11-22
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure, 17, 2009

2FEA

Crystal structure of MtnX phosphatase from Bacillus Subtilis at 2.00 A resolution
分子名称:	1,2-ETHANEDIOL, 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase, MAGNESIUM ION, ...
著者	Joint Center for Structural Genomics (JCSG)
登録日	2005-12-15
公開日	2005-12-27
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Crystal structure of MtnX phosphatase from Bacillus subtilis at 2.0 A resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate. Proteins, 69, 2007

2HBW

Crystal structure of a putative endopeptidase (ava_3396) from anabaena variabilis atcc 29413 at 1.05 A resolution
分子名称:	ACETATE ION, NLP/P60 protein, UNKNOWN LIGAND
著者	Joint Center for Structural Genomics (JCSG)
登録日	2006-06-14
公開日	2006-08-08
最終更新日	2023-01-25
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure, 17, 2009

3H50

CRYSTAL STRUCTURE OF A TETRACENOMYCIN POLYKETIDE SYNTHESIS PROTEIN (TCMJ) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.60 A RESOLUTION
分子名称:	ACETATE ION, Tetracenomycin polyketide synthesis protein, ZINC ION
著者	Joint Center for Structural Genomics (JCSG)
登録日	2009-04-21
公開日	2009-05-05
最終更新日	2023-02-01
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris. Acta Crystallogr.,Sect.F, 66, 2010

3D1X

Crystal structure of HIV-1 mutant I54M and inhibitor saquinavir
分子名称:	(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, GLYCEROL, ...
著者	Liu, F, Weber, I.T.
登録日	2008-05-06
公開日	2008-06-03
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

3CYW

Effect of Flap Mutations on Structure of HIV-1 Protease and Inhibition by Saquinavir and Darunavir
分子名称:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, GLYCEROL, ...
著者	Liu, F, Weber, I.T.
登録日	2008-04-27
公開日	2008-05-27
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

2J5B

Structure of the Tyrosyl tRNA synthetase from Acanthamoeba polyphaga Mimivirus complexed with tyrosynol
分子名称:	4-[(2S)-2-amino-3-hydroxypropyl]phenol, TYROSYL-TRNA SYNTHETASE
著者	Abergel, C, Rudinger-thirion, J, Giege, R, Claverie, J.M.
登録日	2006-09-13
公開日	2007-09-25
最終更新日	2024-05-01
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Virus-Encoded Aminoacyl-tRNA Synthetases: Structural and Functional Characterization of Mimivirus Tyrrs and Metrs. J.Virol., 81, 2007

3D1Y

Crystal structure of HIV-1 mutant I54V and inhibitor SAQUINA
分子名称:	(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, HIV-1 Protease, ...
著者	Liu, F, Weber, I.T.
登録日	2008-05-06
公開日	2008-05-27
最終更新日	2024-02-21
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

3HYB

Crystal structure of RbcX from Anabaena, crystal form II
分子名称:	RbcX protein, SULFATE ION
著者	Bracher, A, Liu, C.
登録日	2009-06-22
公開日	2010-01-19
最終更新日	2023-09-06
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Coupled chaperone action in folding and assembly of hexadecameric Rubisco. Nature, 463, 2010

3D1Z

Crystal structure of HIV-1 mutant I54M and inhibitor DARUNAVIR
分子名称:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETIC ACID, CHLORIDE ION, ...
著者	Liu, F, Kovalesky, A.Y, Tie, Y, Ghosh, A.K, Harrison, R.W, Weber, I.T.
登録日	2008-05-07
公開日	2008-05-27
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

3CYX

Crystal structure of HIV-1 mutant I50V and inhibitor saquinavira
分子名称:	(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETIC ACID, GLYCEROL, ...
著者	Liu, F, Weber, I.T.
登録日	2008-04-27
公開日	2008-05-27
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

3D20

Crystal structure of HIV-1 mutant I54V and inhibitor DARUNAVIA
分子名称:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, HIV-1 Protease, ...
著者	Liu, F, Kovalesky, A.Y, Tie, Y, Ghosh, A.K, Harrison, R.W, Weber, I.T.
登録日	2008-05-07
公開日	2008-05-27
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (1.05 Å)
主引用文献	Effect of flap mutations on structure of HIV-1 protease and inhibition by saquinavir and darunavir. J.Mol.Biol., 381, 2008

3K7T

Crystal structure of apo-form 6-hydroxy-L-nicotine oxidase, crystal form P3121
分子名称:	(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者	Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D.
登録日	2009-10-13
公開日	2010-01-19
最終更新日	2023-09-06
実験手法	X-RAY DIFFRACTION (2.85 Å)
主引用文献	Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans. J.Mol.Biol., 396, 2010

3K7M

Crystal structure of 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans
分子名称:	(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者	Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D.
登録日	2009-10-13
公開日	2010-01-19
最終更新日	2024-02-21
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans. J.Mol.Biol., 396, 2010

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