Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2W17
DownloadVisualize
BU of 2w17 by Molmil
CDK2 in complex with the imidazole pyrimidine amide, compound (S)-8b
分子名称: ACETATE ION, CELL DIVISION PROTEIN KINASE 2, N-(4-{[(3S)-3-(dimethylamino)pyrrolidin-1-yl]carbonyl}phenyl)-5-fluoro-4-[2-methyl-1-(1-methylethyl)-1H-imidazol-5-yl]pyrimidin-2-amine
著者Jones, C.D, Andrews, D.M, Barker, A.J, Blades, K, Daunt, P, East, S, Geh, C, Graham, M.A, Johnson, K.M, Loddick, S.A, McFarland, H.M, McGregor, A, Moss, L, Rudge, D.A, Simpson, P.B, Swain, M.L, Tam, K.Y, Tucker, J.A, Walker, M, Brassington, C, Haye, H, McCall, E.
登録日2008-10-15
公開日2008-11-04
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The Discovery of Azd5597, a Potent Imidazole Pyrimidine Amide Cdk Inhibitor Suitable for Intravenous Dosing.
Bioorg.Med.Chem.Lett., 18, 2008
6Y7D
DownloadVisualize
BU of 6y7d by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H433A
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
著者Zhang, L, Kroneck, P.M.H, Einsle, O.
登録日2020-02-28
公開日2021-01-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase.
Chem Sci, 12, 2021
6Y83
DownloadVisualize
BU of 6y83 by Molmil
Capsid structure of Leishmania RNA virus 1
分子名称: Capsid protein
著者Prochazkova, M, Fuzik, T, Grybtchuk, D, Falginella, F, Podesvova, L, Yurchenko, V, Vacha, R, Plevka, P.
登録日2020-03-03
公開日2020-11-11
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Capsid Structure of Leishmania RNA Virus 1.
J.Virol., 95, 2021
3B7J
DownloadVisualize
BU of 3b7j by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) from Helicobacter pylori complexed with juglone
分子名称: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, 5-hydroxynaphthalene-1,4-dione, BENZAMIDINE, ...
著者Zhang, L, Kong, Y.H, Wu, D, Shen, X, Jiang, H.L.
登録日2007-10-31
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Natural product juglone targets three key enzymes from Helicobacter pylori: inhibition assay with crystal structure characterization
ACTA PHARMACOL.SIN., 29, 2008
2W4Z
DownloadVisualize
BU of 2w4z by Molmil
Caulobacter bacteriophage 5
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, CAULOBACTER BACTERIOPHAGE 5
著者Plevka, P, Kazaks, A, Dishlers, A, Liljas, L, Tars, K.
登録日2008-12-02
公開日2009-07-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The Structure of Bacteriophage Phicb5 Reveals a Role of the RNA Genome and Metal Ions in Particle Stability and Assembly.
J.Mol.Biol., 391, 2009
2W1D
DownloadVisualize
BU of 2w1d by Molmil
Structure determination of Aurora Kinase in complex with inhibitor
分子名称: 2-(1H-pyrazol-3-yl)-1H-benzimidazole, SERINE/THREONINE-PROTEIN KINASE 6
著者Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
登録日2008-10-17
公開日2009-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
2WD1
DownloadVisualize
BU of 2wd1 by Molmil
Human c-Met Kinase in complex with azaindole inhibitor
分子名称: 1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE, GAMMA-BUTYROLACTONE, HEPATOCYTE GROWTH FACTOR RECEPTOR
著者Porter, J, Lumb, S, Franklin, R.J, Gascon-Simorte, J.M, Calmiano, M, Le Riche, K, Lallemand, B, Keyaerts, J, Edwards, H, Maloney, A, Delgado, J, King, L, Foley, A, Lecomte, F, Reuberson, J, Meier, C, Batchelor, M.
登録日2009-03-19
公開日2009-04-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of 4-Azaindoles as Novel Inhibitors of C- met Kinase.
Bioorg.Med.Chem.Lett., 19, 2009
3RK1
DownloadVisualize
BU of 3rk1 by Molmil
'X-ray crystal Structure of the putative N-type ATP pyrophosphatase (PF0828) in complex with ATP from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR23
分子名称: ADENOSINE-5'-TRIPHOSPHATE, N-type ATP pyrophosphatase superfamily, PHOSPHATE ION
著者Forouhar, F, Seetharaman, J, Janjua, J, Xiao, R, Cunningham, K, Ma, L, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-04-16
公開日2011-05-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A large conformational change in the putative ATP pyrophosphatase PF0828 induced by ATP binding.
Acta Crystallogr.,Sect.F, 67, 2011
2VUG
DownloadVisualize
BU of 2vug by Molmil
The structure of an archaeal homodimeric RNA ligase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PAB1020, ...
著者Brooks, M.A, Meslet-Cladiere, L, Graille, M, Kuhn, J, Blondeau, K, Myllykallio, H, van Tilbeurgh, H.
登録日2008-05-26
公開日2008-06-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of an archaeal homodimeric ligase which has RNA circularization activity.
Protein Sci., 17, 2008
3BFA
DownloadVisualize
BU of 3bfa by Molmil
Crystal structure of a pheromone binding protein from Apis mellifera in complex with the Queen mandibular pheromone
分子名称: (2Z)-9-oxodec-2-enoic acid, GLYCEROL, Pheromone-binding protein ASP1
著者Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
登録日2007-11-21
公開日2008-06-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis of the honey bee PBP pheromone and pH-induced conformational change
J.Mol.Biol., 380, 2008
3BFX
DownloadVisualize
BU of 3bfx by Molmil
Crystal structure of human sulfotransferase SULT1C1 in complex with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase 1C2
著者Dong, A, Dombrovski, L, Loppnau, P, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2007-11-23
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of Human Sulfotransferases Sult1B1 and Sult1C1 Complexed with the Cofactor Product Adenosine-3'-5'-Diphosphate (Pap).
Proteins, 64, 2006
2W1H
DownloadVisualize
BU of 2w1h by Molmil
Fragment-Based Discovery of the Pyrazol-4-yl urea (AT9283), a Multi- targeted Kinase Inhibitor with Potent Aurora Kinase Activity
分子名称: CELL DIVISION PROTEIN KINASE 2, N-[3-(1H-BENZIMIDAZOL-2-YL)-1H-PYRAZOL-4-YL]BENZAMIDE
著者Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
登録日2008-10-17
公開日2009-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
2W1J
DownloadVisualize
BU of 2w1j by Molmil
CRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniae
分子名称: GLYCEROL, PUTATIVE SORTASE
著者Manzano, C, Contreras-Martel, C, El Mortaji, L, Izore, T, Fenel, D, Vernet, T, Schoehn, G, Di Guilmi, A.M, Dessen, A.
登録日2008-10-17
公開日2008-12-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Sortase-Mediated Pilus Fiber Biogenesis in Streptococcus Pneumoniae.
Structure, 16, 2008
2WEJ
DownloadVisualize
BU of 2wej by Molmil
Thermodynamic Optimisation of Carbonic Anhydrase Fragment Inhibitors
分子名称: CARBONIC ANHYDRASE 2, GLYCEROL, ZINC ION, ...
著者Scott, A.D, Phillips, C, Alex, A, Bent, A, O'Brien, R, Damian, L, Jones, L.H.
登録日2009-03-31
公開日2009-11-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Thermodynamic Optimisation in Drug Discovery: A Case Study Using Carbonic Anhydrase Inhibitors.
Chemmedchem, 4, 2009
6YIO
DownloadVisualize
BU of 6yio by Molmil
CRYSTAL STRUCTURE OF FAB RG6292 IN COMPLEX WITH CD25 ECD
分子名称: FAB FRAGMENT HEAVY CHAIN, FAB FRGAMENT LIGHT CHAIN, Interleukin-2 receptor subunit alpha
著者Benz, J, Koll, H, Leibrock, L.
登録日2020-04-01
公開日2020-11-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献CD25-T reg -depleting antibodies preserving IL-2 signaling on effector T cells enhance effector activation and antitumor immunity.
Nat Cancer, 1, 2020
6YOR
DownloadVisualize
BU of 6yor by Molmil
Structure of the SARS-CoV-2 spike S1 protein in complex with CR3022 Fab
分子名称: IgG H chain, IgG L chain, Spike glycoprotein
著者Huo, J, Zhao, Y, Ren, J, Zhou, D, Duyvesteyn, H.M.E, Carrique, L, Malinauskas, T, Ruza, R.R, Shah, P.N.M, Fry, E.E, Owens, R, Stuart, D.I.
登録日2020-04-15
公開日2020-04-29
最終更新日2022-04-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Neutralization of SARS-CoV-2 by Destruction of the Prefusion Spike.
Cell Host Microbe, 28, 2020
6YLX
DownloadVisualize
BU of 6ylx by Molmil
pre-60S State NE1 (TAP-Flag-Nop53)
分子名称: 25S rRNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, 5.8S rRNA, ...
著者Kater, L, Beckmann, R.
登録日2020-04-07
公開日2020-07-29
最終更新日2020-09-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Construction of the Central Protuberance and L1 Stalk during 60S Subunit Biogenesis.
Mol.Cell, 79, 2020
6YSC
DownloadVisualize
BU of 6ysc by Molmil
GLYCOSYLATED KNOB-HOLE/DUMMY FC FRAGMENT
分子名称: Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kuglstatter, A, Leibrock, L, Benz, J.
登録日2020-04-22
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Format chain exchange (FORCE) for high-throughput generation of bispecific antibodies in combinatorial binder-format matrices.
Nat Commun, 11, 2020
3BUV
DownloadVisualize
BU of 3buv by Molmil
Crystal structure of human Delta(4)-3-ketosteroid 5-beta-reductase in complex with NADP and HEPES. Resolution: 1.35 A.
分子名称: 3-oxo-5-beta-steroid 4-dehydrogenase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
著者Di Costanzo, L, Drury, J, Penning, T.M, Christianson, D.W.
登録日2008-01-03
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis.
J.Biol.Chem., 283, 2008
6YDF
DownloadVisualize
BU of 6ydf by Molmil
X-ray structure of LPMO.
分子名称: COPPER (II) ION, LPMO lytic polysaccharide monooxygenase, SULFATE ION
著者Tandrup, T, Tryfona, T, Frandsen, K.E.H, Johansen, K.S, Dupree, P, Lo Leggio, L.
登録日2020-03-20
公開日2020-09-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases.
Biochemistry, 59, 2020
3BK1
DownloadVisualize
BU of 3bk1 by Molmil
Crystal Structure Analysis of RNase J
分子名称: GLYCEROL, Metal dependent hydrolase, SULFATE ION, ...
著者de la Sierra-Gallay, I.L, Zig, L, Putzer, H.
登録日2007-12-05
公開日2008-01-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structural insights into the dual activity of RNase J
Nat.Struct.Mol.Biol., 15, 2008
3BY6
DownloadVisualize
BU of 3by6 by Molmil
Crystal structure of a transcriptional regulator from Oenococcus oeni
分子名称: CALCIUM ION, Predicted transcriptional regulator
著者Zhang, R, Volkart, L, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-01-15
公開日2008-02-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of a transcriptional regulator from Oenococcus oeni.
To be Published
2WJ8
DownloadVisualize
BU of 2wj8 by Molmil
Respiratory Syncitial Virus RiboNucleoProtein
分子名称: BORATE ION, NUCLEOPROTEIN, RNA (5'-R(*CP*CP*CP*CP*CP*C)-3')
著者Tawar, R.G, Duquerroy, S, Vonrhein, C, Varela, P.F, Damier-Piolle, L, Castagne, N, MacLellan, K, Bedouelle, H, Bricogne, G, Bhella, D, Eleouet, J, Rey, F.A.
登録日2009-05-25
公開日2009-12-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Crystal Structure of a Nucleocapsid-Like Nucleoprotein-RNA Complex of Respiratory Syncytial Virus
Science, 326, 2009
3BL8
DownloadVisualize
BU of 3bl8 by Molmil
Crystal structure of the extracellular domain of neuroligin 2A from mouse
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuroligin-2, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Jin, X, Koehnke, J, Shapiro, L.
登録日2007-12-10
公開日2008-02-19
最終更新日2021-03-31
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the extracellular cholinesterase-like domain from neuroligin-2.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3G9G
DownloadVisualize
BU of 3g9g by Molmil
Crystal Structure of the N-terminal EFC/F-BAR domain of Syp1
分子名称: Suppressor of yeast profilin deletion
著者Reider, A, Barker, S, Mishra, S, Im, Y.J, Maldonado-Baez, L, Hurley, J, Traub, L, Wendland, B.
登録日2009-02-13
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Syp1 is a conserved endocytic adaptor that contains domains involved in cargo selection and membrane tubulation.
Embo J., 28, 2009

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon