Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6D1N
DownloadVisualize
BU of 6d1n by Molmil
Apo structure of Bacteroides uniformis Beta-glucuronidase 1
分子名称: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-04-12
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6AYH
DownloadVisualize
BU of 6ayh by Molmil
Salmonella enterica GusR
分子名称: 4-nitrophenyl beta-D-glucopyranosiduronic acid, GLYCEROL, TetR family transcriptional regulator
著者Little, M.S, Pellock, S.J.
登録日2017-09-08
公開日2017-12-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for the regulation of beta-glucuronidase expression by human gut Enterobacteriaceae.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6D1P
DownloadVisualize
BU of 6d1p by Molmil
Apo structure of Bacteroides uniformis beta-glucuronidase 3
分子名称: GLYCEROL, Glycosyl hydrolases family 2, sugar binding domain protein, ...
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-04-12
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D41
DownloadVisualize
BU of 6d41 by Molmil
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone
分子名称: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, ...
著者Walton, W.G, Pellock, S.J, Redinbo, M.R.
登録日2018-04-17
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
5DOZ
DownloadVisualize
BU of 5doz by Molmil
Crystal structure of JamJ enoyl reductase (NADPH bound)
分子名称: ACETATE ION, JamJ, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Khare, D, Smith, J.L.
登録日2015-09-11
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structural Basis for Cyclopropanation by a Unique Enoyl-Acyl Carrier Protein Reductase.
Structure, 23, 2015
5DOV
DownloadVisualize
BU of 5dov by Molmil
Crystal structure of JamJ enoyl reductase (apo form)
分子名称: GLYCEROL, JamJ
著者Khare, D, Smith, J.L.
登録日2015-09-11
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for Cyclopropanation by a Unique Enoyl-Acyl Carrier Protein Reductase.
Structure, 23, 2015
6W32
DownloadVisualize
BU of 6w32 by Molmil
Crystal structure of Sfh5
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Phosphatidylinositol transfer protein SFH5
著者Gulten, G, Khan, D, Aggarwal, A, Krieger, I, Sacchettini, J.C, Bankaitis, V.A.
登録日2020-03-08
公開日2020-11-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Sec14-like phosphatidylinositol transfer protein paralog defines a novel class of heme-binding proteins.
Elife, 9, 2020
6OD1
DownloadVisualize
BU of 6od1 by Molmil
IraD-bound to RssB D58P variant
分子名称: Anti-adapter protein IraD, Regulator of RpoS
著者Deaconescu, A.M, Dorich, V.
登録日2019-03-25
公開日2019-04-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for inhibition of a response regulator of sigmaSstability by a ClpXP antiadaptor.
Genes Dev., 33, 2019
5DP1
DownloadVisualize
BU of 5dp1 by Molmil
Crystal structure of CurK enoyl reductase
分子名称: CurK, GLYCEROL, PHOSPHATE ION
著者Khare, D, Smith, J.L.
登録日2015-09-12
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis for Cyclopropanation by a Unique Enoyl-Acyl Carrier Protein Reductase.
Structure, 23, 2015
5DP2
DownloadVisualize
BU of 5dp2 by Molmil
CurF ER cyclopropanase from curacin A biosynthetic pathway
分子名称: CurF, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Khare, D, Smith, J.L.
登録日2015-09-12
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Structural Basis for Cyclopropanation by a Unique Enoyl-Acyl Carrier Protein Reductase.
Structure, 23, 2015
7ZGB
DownloadVisualize
BU of 7zgb by Molmil
Structure of yeast Sec14p with NPPM112
分子名称: 4-fluoranyl-~{N}-[(4-pyrrolidin-1-ylphenyl)methyl]benzamide, SEC14 cytosolic factor
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2022-04-03
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity.
J.Biol.Chem., 299, 2023
7ZG9
DownloadVisualize
BU of 7zg9 by Molmil
Structure of yeast Sec14p with himbacine
分子名称: Himbacine, SEC14 cytosolic factor
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2022-04-03
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.764 Å)
主引用文献Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity.
J.Biol.Chem., 299, 2023
7ZGA
DownloadVisualize
BU of 7zga by Molmil
Structure of yeast Sec14p with ergoline
分子名称: SEC14 cytosolic factor, ~{O}9-methyl ~{O}4-[2,2,2-tris(chloranyl)ethyl] (5~{a}~{S},6~{a}~{S},9~{R},10~{a}~{S})-7-methyl-3-nitro-5,5~{a},6,6~{a},8,9,10,10~{a}-octahydroindolo[4,3-fg]quinoline-4,9-dicarboxylate
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2022-04-03
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity.
J.Biol.Chem., 299, 2023
7ZGC
DownloadVisualize
BU of 7zgc by Molmil
Structure of yeast Sec14p with NPPM481
分子名称: (4-chloranyl-3-nitro-phenyl)-[4-(2-fluorophenyl)piperazin-1-yl]methanone, PHOSPHATE ION, SEC14 cytosolic factor
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2022-04-03
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.236 Å)
主引用文献Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity.
J.Biol.Chem., 299, 2023
7ZGD
DownloadVisualize
BU of 7zgd by Molmil
Structure of yeast Sec14p with NPPM244
分子名称: (4-bromanyl-3-nitro-phenyl)-[4-(2-fluorophenyl)piperazin-1-yl]methanone, SEC14 cytosolic factor
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2022-04-03
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity.
J.Biol.Chem., 299, 2023
6F0E
DownloadVisualize
BU of 6f0e by Molmil
Structure of yeast Sec14p with a picolinamide compound
分子名称: SEC14 cytosolic factor, ~{N}-(1,3-benzodioxol-5-ylmethyl)-5-bromanyl-3-fluoranyl-pyridine-2-carboxamide
著者Hong, Z, Johnen, P, Schaaf, G, Bono, F.
登録日2017-11-20
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Target Identification and Mechanism of Action of Picolinamide and Benzamide Chemotypes with Antifungal Properties.
Cell Chem Biol, 25, 2018
4X7U
DownloadVisualize
BU of 4x7u by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with Mg, SAH and mycinamicin III (substrate)
分子名称: MAGNESIUM ION, MYCINAMICIN III, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X81
DownloadVisualize
BU of 4x81 by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, M56A, E139A variant) in complex with Mg, SAH and mycinamicin VI (MycE substrate)
分子名称: DIMETHYL SULFOXIDE, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X7W
DownloadVisualize
BU of 4x7w by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH and mycinamicin VI (MycE substrate)
分子名称: MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, Mycinamicin VI, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X7Z
DownloadVisualize
BU of 4x7z by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, M56A, E139A variant) in complex with Mg, SAH and mycinamicin III (substrate)
分子名称: DIMETHYL SULFOXIDE, MAGNESIUM ION, MYCINAMICIN III, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X7X
DownloadVisualize
BU of 4x7x by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH and macrocin
分子名称: 2-[(4R,5S,6S,7R,9R,11E,13E,15R,16R)-6-[(2R,3R,4R,5S,6R)-4-(dimethylamino)-5-[(2S,4R,5S,6S)-4,6-dimethyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-3-oxidanyl-oxan-2-yl]oxy-16-ethyl-15-[[(2R,3R,4R,5S,6R)-3-methoxy-6-methyl-4,5-bis(oxidanyl)oxan-2-yl]oxymethyl]-5,9,13-trimethyl-4-oxidanyl-2,10-bis(oxidanylidene)-1-oxacyclohexadeca-11,13-dien-7-yl]ethanal, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X7Y
DownloadVisualize
BU of 4x7y by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, M56A, E139A variant) in complex with Mg and SAH
分子名称: MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4X7V
DownloadVisualize
BU of 4x7v by Molmil
MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH and mycinamicin IV (product)
分子名称: MAGNESIUM ION, MYCINAMICIN IV, Mycinamicin III 3''-O-methyltransferase, ...
著者Bernard, S.M, Smith, J.L.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4XVZ
DownloadVisualize
BU of 4xvz by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with Mg
分子名称: CHLORIDE ION, MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase
著者Akey, D.L, Smith, J.L.
登録日2015-01-28
公開日2015-03-04
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015
4XVY
DownloadVisualize
BU of 4xvy by Molmil
MycF mycinamicin III 3'-O-methyltransferase in complex with SAH
分子名称: MAGNESIUM ION, Mycinamicin III 3''-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Akey, D.L, Smith, J.L.
登録日2015-01-28
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases.
Acs Chem.Biol., 10, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon