Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1NPI
DownloadVisualize
BU of 1npi by Molmil
Tityus Serrulatus Neurotoxin (Ts1) at atomic resolution
分子名称: PHOSPHATE ION, Toxin VII
著者Pinheiro, C.B, Marangoni, S, Toyama, M.H, Polikarpov, I.
登録日2003-01-17
公開日2003-02-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural analysis of Tityus serrulatus Ts1 neurotoxin at atomic resolution: insights into interactions with Na+ channels.
Acta Crystallogr.,Sect.D, 59, 2003
1R2S
DownloadVisualize
BU of 1r2s by Molmil
CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE
分子名称: Triosephosphate isomerase
著者Aparicio, R, Ferreira, S.T, Polikarpov, I.
登録日2003-09-29
公開日2003-12-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Closed conformation of the active site loop of rabbit muscle triosephosphate isomerase in the absence of substrate: evidence of conformational heterogeneity.
J.Mol.Biol., 334, 2003
1M4R
DownloadVisualize
BU of 1m4r by Molmil
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN INTERLEUKIN-22
分子名称: Interleukin-22
著者Nagem, R.A.P, Colau, D, Dumoutier, L, Renauld, J.-C, Ogata, C, Polikarpov, I.
登録日2002-07-03
公開日2003-07-07
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Recombinant Human Interleukin-22
Structure, 10, 2002
4LNW
DownloadVisualize
BU of 4lnw by Molmil
Crystal structure of TR-alpha bound to T3 in a second site
分子名称: 3,5,3'TRIIODOTHYRONINE, Thyroid hormone receptor alpha
著者Puhl, A.C, Aparicio, R, Polikarpov, I.
登録日2013-07-12
公開日2014-03-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of a new hormone-binding site on the surface of thyroid hormone receptor.
Mol.Endocrinol., 28, 2014
4LNX
DownloadVisualize
BU of 4lnx by Molmil
Crystal structure of TR-alpha bound to T4 in a second site
分子名称: 3,5,3',5'-TETRAIODO-L-THYRONINE, 3,5,3'TRIIODOTHYRONINE, Thyroid hormone receptor alpha
著者Puhl, A.C, Aparicio, R, Polikarpov, I.
登録日2013-07-12
公開日2014-03-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Identification of a new hormone-binding site on the surface of thyroid hormone receptor.
Mol.Endocrinol., 28, 2014
4OJ4
DownloadVisualize
BU of 4oj4 by Molmil
Crystal structure of V290M PPARgamma mutant in complex with diclofenac
分子名称: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, CALCIUM ION, Peroxisome proliferator-activated receptor gamma
著者Puhl, A.C, Webb, P, Polikarpov, I.
登録日2014-01-20
公開日2015-02-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a PPAR ligand-resistance syndrome mutant
To be Published
1DI0
DownloadVisualize
BU of 1di0 by Molmil
CRYSTAL STRUCTURE OF LUMAZINE SYNTHASE FROM BRUCELLA ABORTUS
分子名称: LUMAZINE SYNTHASE, PHOSPHATE ION
著者Braden, B.C, Velikovsky, C.A, Cauerhff, A.A, Polikarpov, I, Goldbaum, F.A.
登録日1999-11-28
公開日2000-04-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Divergence in macromolecular assembly: X-ray crystallographic structure analysis of lumazine synthase from Brucella abortus.
J.Mol.Biol., 297, 2000
4IKI
DownloadVisualize
BU of 4iki by Molmil
Crystal structure of wild-type human transthyretin in complex with indomethacin
分子名称: INDOMETHACIN, Transthyretin
著者Lima, L.M.T.R, Polikarpov, I.
登録日2012-12-26
公開日2013-01-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of wild-type human transthyretin in complex with indomethacin
To be Published
5TOA
DownloadVisualize
BU of 5toa by Molmil
Crystal Structure of ER beta bound to Estradiol
分子名称: ESTRADIOL, Estrogen receptor beta
著者Textor, L, Nascimento, A.S, Polikarpov, I.
登録日2016-10-17
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An alternative conformation of ER beta bound to estradiol reveals H12 in a stable antagonist position.
Sci Rep, 7, 2017
5VQJ
DownloadVisualize
BU of 5vqj by Molmil
Discovery of a first GH11 exo-1,4-beta-xylanase from a diverse microbial sugar cane bagasse composting community
分子名称: exo-beta-1,4-xylanase
著者Mello, B.L, Polikarpov, I.
登録日2017-05-09
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.761 Å)
主引用文献Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-beta-xylanase activity.
Biotechnol Biofuels, 10, 2017
5W11
DownloadVisualize
BU of 5w11 by Molmil
Biochemical and structural insights into the catalytic mechanism of thermostable cellobiohydrolase Cel7A from industrially relevant fungus Myceliophthora thermophila
分子名称: Glucanase, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM, alpha-D-mannopyranose, ...
著者Kadowaki, M.A.S, Higasi, P, de Godoy, M.O, Prade, R.A, Polikarpov, I.
登録日2017-06-01
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.311 Å)
主引用文献Biochemical and structural insights into a thermostable cellobiohydrolase from Myceliophthora thermophila.
FEBS J., 285, 2018
4XTA
DownloadVisualize
BU of 4xta by Molmil
MECHANISMS OF PPARgamma ACTIVATION BY NON-STEROIDAL ANTI-INFLAMMATORY DRUGS
分子名称: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, Peroxisome proliferator-activated receptor gamma
著者Puhl, A.C, Webb, P, Polikarpov, I.
登録日2015-01-23
公開日2015-11-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs.
Nucl Recept Signal, 13, 2015
1R2T
DownloadVisualize
BU of 1r2t by Molmil
CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE
分子名称: Triosephosphate isomerase
著者Aparicio, R, Ferreira, S.T, Polikarpov, I.
登録日2003-09-29
公開日2003-12-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Closed conformation of the active site loop of rabbit muscle triosephosphate isomerase in the absence of substrate: evidence of conformational heterogeneity.
J.Mol.Biol., 334, 2003
1R8O
DownloadVisualize
BU of 1r8o by Molmil
Crystal structure of an unusual Kunitz-type trypsin inhibitor from Copaifera langsdorffii seeds
分子名称: Kunitz trypsin inhibitor
著者Krauchenco, S, Nagem, R.A.P, da Silva, J.A, Marangoni, S, Polikarpov, I.
登録日2003-10-27
公開日2004-05-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Three-dimensional structure of an unusual Kunitz (STI) type trypsin inhibitor from Copaifera langsdorffii.
Biochimie, 86, 2004
1R2R
DownloadVisualize
BU of 1r2r by Molmil
CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
著者Aparicio, R, Ferreira, S.T, Polikarpov, I.
登録日2003-09-29
公開日2003-12-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Closed conformation of the active site loop of rabbit muscle triosephosphate isomerase in the absence of substrate: evidence of conformational heterogeneity.
J.Mol.Biol., 334, 2003
4XUM
DownloadVisualize
BU of 4xum by Molmil
PPARgamma ligand binding domain in complex with indomethacin
分子名称: INDOMETHACIN, Peroxisome proliferator-activated receptor gamma
著者Puhl, A.C, Webb, P, Polikarpov, I.
登録日2015-01-26
公開日2015-11-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs.
Nucl Recept Signal, 13, 2015
1TG7
DownloadVisualize
BU of 1tg7 by Molmil
Native structure of beta-galactosidase from Penicillium sp.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rojas, A.L, Nagem, R.A.P, Neustroev, K.N, Arand, M, Adamska, M, Eneyskaya, E.V, Kulminskaya, A.A, Garratt, R.C, Golubev, A.M, Polikarpov, I.
登録日2004-05-28
公開日2004-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of beta-Galactosidase from Penicillium sp. and its Complex with Galactose
J.Mol.Biol., 343, 2004
4YZT
DownloadVisualize
BU of 4yzt by Molmil
Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis complexed with cellotetraose
分子名称: 1,2-ETHANEDIOL, Cellulose hydrolase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Liberato, M.V, Popov, A, Polikarpov, I.
登録日2015-03-25
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.665 Å)
主引用文献Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism.
Sci Rep, 6, 2016
1R8N
DownloadVisualize
BU of 1r8n by Molmil
The Crystal Structure of the Kunitz (STI) Type Inhibitor from Seeds of Delonix regia
分子名称: Kunitz trypsin inhibitor
著者Krauchenco, S, Pando, S.C, Marangoni, S, Polikarpov, I.
登録日2003-10-27
公開日2004-05-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the Kunitz (STI)-type inhibitor from Delonix regia seeds.
Biochem.Biophys.Res.Commun., 312, 2003
4YZP
DownloadVisualize
BU of 4yzp by Molmil
Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis
分子名称: Cellulose hydrolase
著者Liberato, M.V, Popov, A, Polikarpov, I.
登録日2015-03-25
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism.
Sci Rep, 6, 2016
2YOK
DownloadVisualize
BU of 2yok by Molmil
Cellobiohydrolase I Cel7A from Trichoderma harzianum at 1.7 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Textor, L.C, Colussi, F, Serpa, V, Squina, F.M, Pereira Jr, N, Polikarpov, I.
登録日2012-10-25
公開日2012-11-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Joint X-Ray Crystallographic and Molecular Dynamics Study of Cellobiohydrolase I from Trichoderma Harzianum: Deciphering the Structural Features of Cellobiohydrolase Catalytic Activity.
FEBS J., 280, 2013
3B8A
DownloadVisualize
BU of 3b8a by Molmil
Crystal structure of yeast hexokinase PI in complex with glucose
分子名称: Hexokinase-1, SULFATE ION, beta-D-glucopyranose
著者Kuser, P, Cupri, F, Bleicher, L, Polikarpov, I.
登録日2007-10-31
公開日2008-02-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of yeast hexokinase PI in complex with glucose: A classical "induced fit" example revised.
Proteins, 72, 2008
3BF6
DownloadVisualize
BU of 3bf6 by Molmil
Thrombin:suramin complex
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFONIC ACID, PHE-PRO-ARG, Thrombin, ...
著者Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q.
登録日2007-11-20
公開日2007-12-25
最終更新日2015-07-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases.
Biochim.Biophys.Acta, 1794, 2009
2H9T
DownloadVisualize
BU of 2h9t by Molmil
Crystal structure of human alpha-thrombin in complex with suramin
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, PPACK active site thrombin inhibitor, Thrombin
著者Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q.
登録日2006-06-11
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases.
Biochim.Biophys.Acta, 1794, 2009
3C9X
DownloadVisualize
BU of 3c9x by Molmil
Crystal structure of Trichoderma reesei aspartic proteinase
分子名称: GLYCEROL, Trichoderma reesei Aspartic protease
著者Nascimento, A.S, Krauchenco, S, Golubev, A.M, Gustchina, A, Wlodawer, A, Polikarpov, I.
登録日2008-02-19
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Statistical coupling analysis of aspartic proteinases based on crystal structures of the Trichoderma reesei enzyme and its complex with pepstatin A.
J.Mol.Biol., 382, 2008

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon