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8KHM
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BU of 8khm by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
分子名称: GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
7FEQ
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BU of 7feq by Molmil
Cryo-EM structure of apo BsClpP at pH 6.5
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FES
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BU of 7fes by Molmil
Cryo-EM structure of apo BsClpP at pH 4.2
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FER
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BU of 7fer by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FEP
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BU of 7fep by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
5X9Q
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BU of 5x9q by Molmil
Crystal structure of HldC from Burkholderia pseudomallei
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-03-08
公開日2017-12-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of D-glycero-Beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.
Proteins, 86, 2018
7V8V
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BU of 7v8v by Molmil
Crystal structure of PsEst3 S128A mutant
分子名称: esterase
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8U
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BU of 7v8u by Molmil
Crystal structure of PsEst3 wild-type
分子名称: Esterase, NITROBENZENE, SULFATE ION
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8X
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BU of 7v8x by Molmil
Crystal structure of PsEst3 complexed with Phenylmethylsulfonyl fluoride (PMSF)
分子名称: esterase, phenylmethanesulfonic acid
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8W
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BU of 7v8w by Molmil
Crystal structure of PsEst3 S128A variant complexed with malonate
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MALONIC ACID, ...
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
4JJT
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BU of 4jjt by Molmil
The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
分子名称: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
著者Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2013-03-08
公開日2013-03-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
5XF2
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BU of 5xf2 by Molmil
Crystal structure of SeMet-HldC from Burkholderia pseudomallei
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-04-07
公開日2017-07-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Expression and crystallographic studies of D-glycero-beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei
Acta Crystallogr F Struct Biol Commun, 73, 2017
6OI5
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BU of 6oi5 by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial
著者Banerjee, R, Cho, U.S, Kim, H, Moon, S.
登録日2019-04-08
公開日2020-01-15
実験手法X-RAY DIFFRACTION (2.811 Å)
主引用文献A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OI6
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BU of 6oi6 by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfide soaked)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial, ...
著者Banerjee, R, Cho, U.S, Kim, H, Moon, S.
登録日2019-04-08
公開日2020-01-15
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OIB
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BU of 6oib by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ...
著者Banerjee, R, Cho, U.S, Kim, H, Moon, S.
登録日2019-04-09
公開日2020-01-15
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
6OIC
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BU of 6oic by Molmil
Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfite soaked)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, HYDROSULFURIC ACID, Sulfide:quinone oxidoreductase, ...
著者Banerjee, R, Cho, U.S, Kim, H, Moon, S.
登録日2019-04-09
公開日2020-01-15
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation.
Cell Chem Biol, 26, 2019
7N99
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BU of 7n99 by Molmil
SDE2 SAP domain apo structure
分子名称: Isoform 2 of Replication stress response regulator SDE2
著者Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H.
登録日2021-06-17
公開日2022-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks.
J.Biol.Chem., 298, 2022
6KRT
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BU of 6krt by Molmil
monodehydroascorbate reductase, MDHAR, from Antarctic hairgrass Deschampsia antarctica
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, monodehydroascorbate reductase
著者Park, A.K, Do, H, Lee, J.H, Kim, H, Choi, W, Kim, I.S, Kim, H.W.
登録日2019-08-22
公開日2020-08-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献monodehydroascorbate reductase, MDHAR, from Antarctic hairgrass Deschampsia antarctica
To Be Published
5G1D
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BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
分子名称: SYNDECAN-4, SYNTENIN-1
著者Lee, I, Kim, H, Yun, J.H, Lee, W.
登録日2016-03-25
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
3P28
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BU of 3p28 by Molmil
Structure of a Circular Permutant of Green Fluorescent Protein
分子名称: Green fluorescent protein
著者Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J.
登録日2010-10-01
公開日2011-10-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein
To be Published
5G1E
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BU of 5g1e by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
分子名称: SYNTENIN-1
著者Lee, I, Kim, H, Yun, J.H, Lee, W.
登録日2016-03-25
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
8X6M
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BU of 8x6m by Molmil
Crystal Structure of Glycerol Dehydrogenase in the Presence of NAD+ and Glycerol
分子名称: GLYCEROL, Glycerol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, T, Kang, J.Y, Jin, M, Yang, J, Kim, H, Noh, C, Eom, S.H.
登録日2023-11-21
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the octamerization of glycerol dehydrogenase.
Plos One, 19, 2024
4XYH
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BU of 4xyh by Molmil
Wild-type full length Mis16 in Schizosaccharomyces japonicus
分子名称: Kinetochore protein Mis16
著者An, S, Kim, H, Cho, U.-S.
登録日2015-02-02
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mis16 Independently Recognizes Histone H4 and the CENP-ACnp1-Specific Chaperone Scm3sp.
J.Mol.Biol., 427, 2015
4XYI
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BU of 4xyi by Molmil
Mis16 with H4 peptide
分子名称: Histone H4, Kinetochore protein Mis16
著者An, S, Kim, H, Cho, U.-S.
登録日2015-02-02
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Mis16 Independently Recognizes Histone H4 and the CENP-ACnp1-Specific Chaperone Scm3sp.
J.Mol.Biol., 427, 2015
5V7I
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BU of 5v7i by Molmil
Crystal structure of homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), in complex with glycine, PLP and folate-competitive pyrazolopyran inhibitor: 6-amino-4-isopropyl-3-methyl-4-(3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl)-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile
分子名称: (4R)-6-amino-3-methyl-4-(propan-2-yl)-4-[3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl]-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ducker, G.S, Ghergurovich, J.M, Mainolfi, N, Suri, V, Jeong, S, Friedman, A, Manfredi, M, Kim, H, Rabinowitz, J.D.
登録日2017-03-20
公開日2017-10-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Human SHMT inhibitors reveal defective glycine import as a targetable metabolic vulnerability of diffuse large B-cell lymphoma.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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