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8I9Y
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BU of 8i9y by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2
分子名称: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
著者Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
登録日2023-02-07
公開日2023-05-17
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
3WVJ
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BU of 3wvj by Molmil
The crystal structure of native glycosidic hydrolase
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase
著者Chen, C.C, Huang, J.W, Zhao, P, Ko, T.P, Huang, C.H, Chan, H.C, Huang, Z, Liu, W, Cheng, Y.S, Liu, J.R, Guo, R.T.
登録日2014-05-22
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural analyses and yeast production of the beta-1,3-1,4-glucanase catalytic module encoded by the licB gene of Clostridium thermocellum.
Enzyme.Microb.Technol., 71, 2015
5USG
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BU of 5usg by Molmil
5-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
分子名称: DNA (5'-D(*AP*(T5S)P*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
著者Fang, Z, Qin, L, Huang, Z.
登録日2017-02-13
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5US2
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BU of 5us2 by Molmil
2-Se-T2-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
分子名称: DNA (5'-D(*AP*(US3)P*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
著者Fang, Z, Yang, F, Huang, Z.
登録日2017-02-13
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献2-Se-T-modified-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
To Be Published
5USA
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BU of 5usa by Molmil
5-Se-T2-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
分子名称: DNA (5'-D(*AP*(T5S)P*GP*TP*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
著者Fang, Z, Qin, L, Huang, Z.
登録日2017-02-13
公開日2017-03-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
5USE
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BU of 5use by Molmil
5-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
分子名称: DNA (5'-D(*AP*TP*GP*(T5S)P*CP*G)-3'), MAGNESIUM ION, RNA (5'-R(*UP*CP*GP*AP*CP*A)-3'), ...
著者Fang, Z, Qin, L, Huang, Z.
登録日2017-02-13
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
4RHD
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BU of 4rhd by Molmil
DNA Duplex with Novel ZP Base Pair
分子名称: DNA 9mer novel P nucleobase, DNA 9mer novel Z nucleobase, MAGNESIUM ION
著者Zhang, W, Zhang, L, Benner, S, Huang, Z.
登録日2014-10-01
公開日2015-07-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolution of functional six-nucleotide DNA.
J.Am.Chem.Soc., 137, 2015
6X5D
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BU of 6x5d by Molmil
Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-T modification
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*(UWJ)P*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Chen, C, Fang, Z, Huang, Z.
登録日2020-05-25
公開日2021-06-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献2'-Beta-Selenium Atom on Thymidine to Control Beta-Form DNA Conformation and Large Crystal Formation
Cryst.Growth Des., 22, 2022
3BM0
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BU of 3bm0 by Molmil
Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC
分子名称: 5'-D(*GP*(2'-Se-U)P*GP*(5-Se-U)P*AP*CP*AP*C)-3'
著者Jiang, J, SHeng, J, Hassan, A.E, Huang, Z.
登録日2007-12-11
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis and crystallographic analysis of 5-Se-thymidine DNAs.
Org.Lett., 11, 2009
6NUD
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BU of 6nud by Molmil
Small conformation of ssRNA-bound CRISPR_Csm complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
著者Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
登録日2019-01-31
公開日2019-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
6NUE
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BU of 6nue by Molmil
Small conformation of apo CRISPR_Csm complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
著者Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
登録日2019-01-31
公開日2019-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
3IJK
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BU of 3ijk by Molmil
5-OMe modified DNA 8mer
分子名称: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3'
著者Sheng, J, Zhang, W, Hassan, A.E.A, Gan, J, Huang, Z.
登録日2009-08-04
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
6AEG
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BU of 6aeg by Molmil
Crystal structure of xCas9 in complex with sgRNA and target DNA (GAT PAM)
分子名称: DNA (25-MER), DNA (5'-D(*AP*AP*AP*GP*AP*TP*TP*AP*TP*TP*G)-3'), DNA nuclease, ...
著者Guo, M, Ren, K, Zhu, Y, Huang, Z.
登録日2018-08-04
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Structural insights into a high fidelity variant of SpCas9.
Cell Res., 29, 2019
6AEB
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BU of 6aeb by Molmil
Crystal structure of xCas9 in complex with sgRNA and target DNA (AAG PAM)
分子名称: DNA (25-MER), DNA (5'-D(*AP*AP*AP*AP*AP*GP*TP*AP*TP*TP*G)-3'), DNA Nuclease, ...
著者Guo, M, Ren, K, Zhu, Y, Huang, Z.
登録日2018-08-04
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Structural insights into a high fidelity variant of SpCas9.
Cell Res., 29, 2019
8IAZ
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BU of 8iaz by Molmil
Cryo-EM structure of the ISFba1 TnpB-reRNA-dsDNA complex
分子名称: DNA (5'-D(P*AP*CP*AP*TP*GP*GP*AP*CP*CP*AP*TP*CP*AP*GP*CP*TP*CP*CP*TP*AP*AP*TP*GP*G)-3'), DNA (5'-D(P*CP*CP*AP*TP*TP*AP*GP*GP*AP*GP*CP*TP*GP*AP*TP*G)-3'), RNA (207-MER), ...
著者Yin, M, Zhou, F, Zhu, Y, Huang, Z.
登録日2023-02-09
公開日2024-04-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Discovery and structural mechanism of DNA endonucleases guided by RAGATH-18-derived RNAs.
Cell Res., 34, 2024
3FA1
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BU of 3fa1 by Molmil
Crystal Structure of Tellurium Derivatized DNA
分子名称: 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3'
著者Sheng, J, Tatsuya, M, Hassan, A.E, Huang, Z.
登録日2008-11-14
公開日2009-01-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Tellurium Derivatized DNA
To be Published
4AQC
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BU of 4aqc by Molmil
Triazolopyridine-based Inhibitor of Janus Kinase 2
分子名称: 8-(4-methylsulfonylphenyl)-N-(4-morpholin-4-ylphenyl)-[1,2,4]triazolo[1,5-a]pyridin-2-amine, SULFATE ION, TYROSINE-PROTEIN KINASE JAK2
著者Dugan, B.J, Gingrich, D.E, Mesaros, E.F, Milkiewicz, K.L, Curry, M.A, Zulli, A.L, Dobrzanski, P, Serdikoff, C, Jan, M, Angeles, T.S, Albom, M.S, Mason, J.L, Aimone, L.D, Meyer, S.L, Huang, Z, Wells-Knecht, K.J, Ator, M.A, Ruggeri, B.A, Dorsey, B.D.
登録日2012-04-16
公開日2012-04-25
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Selective, Orally Bioavailable 1,2,4-Triazolo[1,5-A]Pyridine-Based Inhibitor of Janus Kinase 2 for Use in Anticancer Therapy: Discovery of Cep-33779.
J.Med.Chem., 55, 2012
3HGA
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BU of 3hga by Molmil
Crystal Structure of 4-Se-Uridine Derivatized RNA
分子名称: 5'-R(*UP*(US5)P*CP*GP*CP*G)-3'
著者Sheng, J, Soares, A, Huang, Z.
登録日2009-05-13
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Oxygen Replacement with Selenium at the Uridine 4-Position for RNA Structure Study and Visualization
To be Published
3HGD
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BU of 3hgd by Molmil
Crystal Structure of 2-Se-Thymidine Derivatized DNA
分子名称: 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3'
著者Sheng, J, Hassan, A.E, Zhang, W, Huang, Z.
登録日2009-05-13
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献High fidelity of base pairing by 2-selenothymidine in DNA.
J.Am.Chem.Soc., 132, 2010
5ID6
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BU of 5id6 by Molmil
Structure of Cpf1/RNA Complex
分子名称: Cpf1, MAGNESIUM ION, RNA (5'-R(P*AP*AP*UP*UP*UP*CP*UP*AP*CP*UP*AP*AP*GP*UP*GP*UP*AP*GP*AP*UP*C)-3')
著者Dong, D, Ren, K, Qiu, X, Wang, J, Huang, Z.
登録日2016-02-24
公開日2016-04-27
最終更新日2016-05-11
実験手法X-RAY DIFFRACTION (2.382 Å)
主引用文献The crystal structure of Cpf1 in complex with CRISPR RNA
Nature, 532, 2016
8J7S
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BU of 8j7s by Molmil
Structure of the SPARTA complex
分子名称: DNA (5'-D(P*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*CP*AP*AP*TP*AP*GP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*A)-3'), ...
著者Guo, M, Zhu, Y, Lin, Z, Huang, Z.
登録日2023-04-28
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Cryo-EM structure of the ssDNA-activated SPARTA complex.
Cell Res., 33, 2023
4DWI
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BU of 4dwi by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with self complementary DNA, Se-dGTP and Calcium
分子名称: 9-METHYLGUANINE, CALCIUM ION, DNA (5'-D(*AP*CP*TP*GP*GP*AP*TP*CP*CP*A)-3'), ...
著者Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
登録日2012-02-24
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published
4YS5
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BU of 4ys5 by Molmil
DNA sequence containing 2'-Se-dC modification
分子名称: DNA (5'-D(*GP*TP*GP*GP*(2SC)P*CP*AP*C)-3')
著者Kong, C, Zhang, W, Salon, J, Huang, Z.
登録日2015-03-16
公開日2016-02-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献DNA sequence containing 2'-Se-dC modification.
To Be Published
2O8T
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BU of 2o8t by Molmil
Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q) in complex with Inhibitors
分子名称: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, SULFATE ION, ...
著者Zhao, G, Yuan, C, Jiang, L, Huang, Z, Huang, M.
登録日2006-12-12
公開日2007-12-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
4DSK
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BU of 4dsk by Molmil
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, PPi and Calcium
分子名称: CALCIUM ION, DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), ...
著者Gan, J.H, Abdur, R, Liu, H.H, Sheng, J, Caton-Willians, J, Soares, A.S, Huang, Z.
登録日2012-02-19
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
To be Published

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件を2024-07-17に公開中

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