Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1O0X
DownloadVisualize
BU of 1o0x by Molmil
Crystal structure of Methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.90 A resolution
分子名称: Methionine aminopeptidase
著者Joint Center for Structural Genomics (JCSG)
登録日2002-09-13
公開日2002-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 A resolution.
Proteins, 56, 2004
1O51
DownloadVisualize
BU of 1o51 by Molmil
Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.50 A resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, Hypothetical protein TM0021, SULFATE ION
著者Joint Center for Structural Genomics (JCSG)
登録日2003-08-01
公開日2003-08-19
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 A resolution
Proteins, 54, 2004
1O59
DownloadVisualize
BU of 1o59 by Molmil
Crystal structure of Allantoicase (yir029w) from Saccharomyces cerevisiae at 2.40 A resolution
分子名称: Allantoicase
著者Joint Center for Structural Genomics (JCSG)
登録日2003-08-22
公開日2003-09-02
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of an allantoicase (YIR029W) from Saccharomyces cerevisiae at 2.4 A resolution
Proteins, 56, 2004
6W2D
DownloadVisualize
BU of 6w2d by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
登録日2020-03-05
公開日2020-07-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W19
DownloadVisualize
BU of 6w19 by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
登録日2020-03-03
公開日2020-07-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W2E
DownloadVisualize
BU of 6w2e by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
登録日2020-03-05
公開日2020-07-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
1O1X
DownloadVisualize
BU of 1o1x by Molmil
Crystal structure of a ribose 5-phosphate isomerase rpib (tm1080) from thermotoga maritima at 1.90 A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ribose-5-phosphate isomerase RpiB
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-12
公開日2003-04-01
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 A resolution.
Proteins, 56, 2004
1O1Y
DownloadVisualize
BU of 1o1y by Molmil
Crystal structure of a glutamine amidotransferase (tm1158) from thermotoga maritima at 1.70 A resolution
分子名称: SULFATE ION, conserved hypothetical protein TM1158
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-12
公開日2003-03-11
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 A resolution.
PROTEINS, 54, 2004
1O5H
DownloadVisualize
BU of 1o5h by Molmil
Crystal structure of formiminotetrahydrofolate cyclodeaminase (TM1560) from Thermotoga maritima at 2.80 A resolution
分子名称: Formiminotetrahydrofolate cyclodeaminase
著者Joint Center for Structural Genomics (JCSG)
登録日2003-09-17
公開日2003-09-30
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of a formiminotetrahydrofolate cyclodeaminase (TM1560) from Thermotoga maritima at 2.80 A resolution reveals a new fold
Proteins, 58, 2005
1O3U
DownloadVisualize
BU of 1o3u by Molmil
Crystal structure of an hepn domain protein (tm0613) from thermotoga maritima at 1.75 A resolution
分子名称: conserved hypothetical protein TM0613
著者Joint Center for Structural Genomics (JCSG)
登録日2003-03-28
公開日2003-04-22
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of an HEPN domain protein (TM0613) from Thermotoga maritima at 1.75 A resolution.
PROTEINS, 54, 2004
1O22
DownloadVisualize
BU of 1o22 by Molmil
Crystal structure of an orphan protein (TM0875) from Thermotoga maritima at 2.00 A resolution
分子名称: orphan protein TM0875
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-15
公開日2003-04-01
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an orphan protein (TM0875) from Thermotoga maritima at 2.00-A resolution reveals a new fold.
Proteins, 56, 2004
1O4V
DownloadVisualize
BU of 1o4v by Molmil
Crystal structure of the catalytic subunit of a phosphoribosylaminoimidazole mutase (tm0446) from thermotoga maritima at 1.77 A resolution
分子名称: SULFATE ION, phosphoribosylaminoimidazole mutase PurE
著者Joint Center for Structural Genomics (JCSG)
登録日2003-07-11
公開日2003-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of a phosphoribosylaminoimidazole mutase PurE (TM0446) from Thermotoga maritima at 1.77 A resolution
Proteins, 55, 2004
1O1Z
DownloadVisualize
BU of 1o1z by Molmil
Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) (TM1621) from Thermotoga maritima at 1.60 A resolution
分子名称: SODIUM ION, glycerophosphodiester phosphodiesterase
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-12
公開日2003-04-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Proteins, 56, 2004
1O2D
DownloadVisualize
BU of 1o2d by Molmil
Crystal structure of Alcohol dehydrogenase, iron-containing (TM0920) from Thermotoga maritima at 1.30 A resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alcohol dehydrogenase, iron-containing, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-27
公開日2003-06-10
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 A resolution
Proteins, 54, 2004
1O4U
DownloadVisualize
BU of 1o4u by Molmil
Crystal structure of a nicotinate nucleotide pyrophosphorylase (tm1645) from thermotoga maritima at 2.50 A resolution
分子名称: Type II quinolic acid phosphoribosyltransferase
著者Joint Center for Structural Genomics (JCSG)
登録日2003-07-09
公開日2003-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 A resolution
Proteins, 55, 2004
8D35
DownloadVisualize
BU of 8d35 by Molmil
Crystal structure of SARS-CoV-2 main protease (Mpro) C145A mutant in complex with peptide from human tRNA methyltransferase TRMT1
分子名称: 3C-like proteinase nsp5, CHLORIDE ION, GLYCEROL, ...
著者D'Oliviera, A, Mugridge, J.S.
登録日2022-05-31
公開日2023-03-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Recognition and Cleavage of Human tRNA Methyltransferase TRMT1 by the SARS-CoV-2 Main Protease.
Elife, 2023
6ODM
DownloadVisualize
BU of 6odm by Molmil
Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H.
登録日2019-03-26
公開日2019-06-19
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570, 2019
1VLR
DownloadVisualize
BU of 1vlr by Molmil
Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution
分子名称: 1,2-ETHANEDIOL, mRNA decapping enzyme
著者Joint Center for Structural Genomics (JCSG)
登録日2004-08-10
公開日2004-08-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution.
Proteins, 60, 2005
5EJM
DownloadVisualize
BU of 5ejm by Molmil
ThDP-Mn2+ complex of R413A variant of EcMenD soaked with 2-ketoglutarate for 35 min
分子名称: (4~{R})-4-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-1,3-thiazol-3-ium-2-yl]-4-oxidanyl-butanoic acid, 1,2-ETHANEDIOL, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, ...
著者Song, H.G, Dong, C, Chen, Y.Z, Sun, Y.R, Guo, Z.H.
登録日2015-11-02
公開日2016-11-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Two active site arginines are critical determinants of substrate binding and catalysis in MenD, a thiamine-dependent enzyme in menaquinone biosynthesis.
Biochem. J., 2018
5LBV
DownloadVisualize
BU of 5lbv by Molmil
Structural basis of zika and dengue virus potent antibody cross-neutralization
分子名称: SODIUM ION, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, envelope protein E
著者Barba-Spaeth, G.
登録日2016-06-17
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of potent Zika-dengue virus antibody cross-neutralization.
Nature, 536, 2016
5LBS
DownloadVisualize
BU of 5lbs by Molmil
structural basis of Zika and Dengue virus potent antibody cross-neutralization
分子名称: 1,2-ETHANEDIOL, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8, SULFATE ION, ...
著者Vaney, M.C, Rouvinski, A, Barba-Spaeth, G, Rey, F.A.
登録日2016-06-17
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural basis of potent Zika-dengue virus antibody cross-neutralization.
Nature, 536, 2016
5LCV
DownloadVisualize
BU of 5lcv by Molmil
Structural basis of Zika and Dengue virus potent antibody cross-neutralization
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, FORMIC ACID, ...
著者Barba-Spaeth, G.
登録日2016-06-22
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural basis of potent Zika-dengue virus antibody cross-neutralization.
Nature, 536, 2016
5Z2R
DownloadVisualize
BU of 5z2r by Molmil
ThDP-Mn2+ complex of R395K variant of EcMenD soaked with 2-ketoglutarate for 5 min
分子名称: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, FORMIC ACID, ...
著者Qin, M.M, Guo, Z.H.
登録日2018-01-03
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Two active site arginines are critical determinants of substrate binding and catalysis in MenD: a thiamine-dependent enzyme in menaquinone biosynthesis.
Biochem. J., 475, 2018
5Z2P
DownloadVisualize
BU of 5z2p by Molmil
ThDP-Mn2+ complex of R413K variant of EcMenD soaked with 2-ketoglutarate for 5 min
分子名称: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, FORMIC ACID, ...
著者Qin, M.M, Guo, Z.H.
登録日2018-01-03
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Two active site arginines are critical determinants of substrate binding and catalysis in MenD: a thiamine-dependent enzyme in menaquinone biosynthesis.
Biochem. J., 475, 2018
5Z2U
DownloadVisualize
BU of 5z2u by Molmil
ThDP-Mn2+ complex of R395A variant of EcMenD soaked with 2-ketoglutarate for 5 min
分子名称: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, 1,2-ETHANEDIOL, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, ...
著者Qin, M.M, Guo, Z.H.
登録日2018-01-04
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Two active site arginines are critical determinants of substrate binding and catalysis in MenD: a thiamine-dependent enzyme in menaquinone biosynthesis.
Biochem. J., 475, 2018

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon