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2OUE
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Crystal structure of a junctionless all-RNA hairpin ribozyme at 2.05 angstroms resolution
分子名称: COBALT HEXAMMINE(III), Loop A ribozyme strand, Loop B S-turn strand, ...
著者Wedekind, J.E.
登録日2007-02-10
公開日2007-03-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
1ZFV
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The structure of an all-RNA minimal Hairpin Ribozyme with Mutation G8A at the cleavage site
分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*AP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
著者Wedekind, J.E.
登録日2005-04-20
公開日2006-02-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
1ZFX
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BU of 1zfx by Molmil
The Structure of a minimal all-RNA Hairpin Ribozyme with the mutant G8U at the cleavage site
分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*UP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
著者Wedekind, J.E.
登録日2005-04-20
公開日2006-02-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
1ZFT
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The crystal structure of an all-RNA minimal Hairpin Ribozyme with mutant G8I at the cleavage site
分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*IP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
著者Wedekind, J.E.
登録日2005-04-20
公開日2006-02-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
8RXX
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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
著者Rajan, K.S, Yonath, A.
登録日2024-02-08
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8RXH
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BU of 8rxh by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
分子名称: (2S)-2-[2-[4-[[(2R,3S,4S)-3-acetyloxy-4-oxidanyl-pyrrolidin-2-yl]methyl]phenoxy]ethanoylamino]-6-azanyl-hexanoic acid, 40S ribosomal protein S12, 40S ribosomal protein S14, ...
著者Rajan, K.S, Yonath, A.
登録日2024-02-07
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
6AT9
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Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-A*0101
分子名称: ALK, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Toor, J, Rao, A.A, Salama, S, Tripathi, S, Haussler, D, Sgourakis, N.G.
登録日2017-08-28
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9503 Å)
主引用文献A Recurrent Mutation in Anaplastic Lymphoma Kinase with Distinct Neoepitope Conformations.
Front Immunol, 9, 2018
8A98
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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
著者Rajan, K.S, Yonath, A, Bashan, A.
登録日2022-06-28
公開日2023-10-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8OVA
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BU of 8ova by Molmil
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
分子名称: 40S ribosomal protein L14, putative, 40S ribosomal protein S10, ...
著者Rajan, K.S, Yonath, A.
登録日2023-04-25
公開日2023-11-29
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
Nat Commun, 14, 2023
8OVE
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CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
分子名称: 40S ribosomal protein L14, putative, 40S ribosomal protein S10, ...
著者Rajan, K.S, Yonath, A.
登録日2023-04-25
公開日2023-11-29
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
Nat Commun, 14, 2023
8OVJ
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BU of 8ovj by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
著者Rajan, K.S, Yonath, A.
登録日2023-04-26
公開日2024-05-08
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
5TXS
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BU of 5txs by Molmil
Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-B*1501
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-15 alpha chain, ...
著者Toor, J, Rao, A.A, Salama, S, Tripathi, S, Haussler, D, Sgourakis, N.G.
登録日2016-11-17
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献A Recurrent Mutation in Anaplastic Lymphoma Kinase with Distinct Neoepitope Conformations.
Front Immunol, 9, 2018
5VZ5
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BU of 5vz5 by Molmil
Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-B*1501
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Toor, J, Rao, A.A, Salama, S, Tripathi, S, Haussler, D, Sgourakis, N.G.
登録日2017-05-26
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5901 Å)
主引用文献A Recurrent Mutation in Anaplastic Lymphoma Kinase with Distinct Neoepitope Conformations.
Front Immunol, 9, 2018
1G27
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BU of 1g27 by Molmil
CRYSTAL STRUCTURE OF E.COLI POLYPEPTIDE DEFORMYLASE COMPLEXED WITH THE INHIBITOR BB-3497
分子名称: 2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEXANOIC ACID (1-DIMETHYLCARBAMOYL-2,2-DIMETHYL-PROPYL)-AMIDE, NICKEL (II) ION, POLYPEPTIDE DEFORMYLASE
著者Clements, J.M, Beckett, P, Brown, A, Catlin, C, Lobell, M, Palan, S, Thomas, W, Whittaker, M, Baker, P.J, Rodgers, H.F, Barynin, V, Rice, D.W, Hunter, M.G.
登録日2000-10-17
公開日2001-10-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Antibiotic activity and characterization of BB-3497, a novel peptide deformylase inhibitor.
Antimicrob.Agents Chemother., 45, 2001
1G2A
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BU of 1g2a by Molmil
THE CRYSTAL STRUCTURE OF E.COLI PEPTIDE DEFORMYLASE COMPLEXED WITH ACTINONIN
分子名称: ACTINONIN, NICKEL (II) ION, POLYPEPTIDE DEFORMYLASE
著者Clements, J.M, Beckett, P, Brown, A, Catlin, C, Lobell, M, Palan, S, Thomas, W, Whittaker, M, Baker, P.J, Rodgers, H.F, Barynin, V, Rice, D.W, Hunter, M.G.
登録日2000-10-18
公開日2001-10-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Antibiotic activity and characterization of BB-3497, a novel peptide deformylase inhibitor.
Antimicrob.Agents Chemother., 45, 2001
6P78
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queuine lyase from Clostridium spiroforme bound to SAM and queuine
分子名称: 2-amino-5-({[(1S,4S,5S)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-1,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, IRON/SULFUR CLUSTER, Queuine lyase, ...
著者Almo, S.C, Grove, T.L.
登録日2019-06-05
公開日2019-09-18
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.726 Å)
主引用文献Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens.
Proc.Natl.Acad.Sci.USA, 116, 2019
8AAV
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BU of 8aav by Molmil
Human heavy chain ferritin with introduced Cys residues modified with C10 ligand
分子名称: 2-bromanyl-N-decyl-ethanamide, FE (III) ION, Ferritin heavy chain, ...
著者Boehler, H, Beck, T.
登録日2022-07-03
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Assembly of chemically modified protein nanocages into 3D materials for the adsorption of uremic toxins.
J Mater Chem B, 11, 2022
7F32
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Ny-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases
分子名称: SYCNCLCRRGVCRCICTI
著者Xia, Y, Liu, C.F.
登録日2021-06-15
公開日2022-09-07
実験手法SOLUTION NMR
主引用文献N gamma-Hydroxyasparagine: A Multifunctional Unnatural Amino Acid That is a Good P1 Substrate of Asparaginyl Peptide Ligases.
Angew.Chem.Int.Ed.Engl., 60, 2021
2L76
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BU of 2l76 by Molmil
Solution NMR structure of human NFATC2IP ubiquitin-like domain, NFATC2IP_244_338, NESG target HT65A/OCSP target hs00387_244_338/SGC-toronto
分子名称: NFATC2-interacting protein
著者Wu, B, Yee, A, Houliston, S, Doherty, R, Semesi, A, Dhe-Paganon, S, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
登録日2010-12-03
公開日2010-12-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Human NFATC2IP ubiquitin-like domains
To be Published
7EQE
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BU of 7eqe by Molmil
Crystal Structure of a transcription factor
分子名称: TetR/AcrR family transcriptional regulator
著者Uehara, S, Tsugita, A, Matsui, T, Yokoyama, T, Ostash, I, Ostash, B, Tanaka, Y.
登録日2021-05-01
公開日2022-04-27
最終更新日2022-10-19
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献The carbohydrate tail of landomycin A is responsible for its interaction with the repressor protein LanK.
Febs J., 289, 2022
7EQF
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Crystal Structure of a Transcription Factor in complex with Ligand
分子名称: (6~{R})-3-methyl-8-[(2~{S},4~{R},5~{S},6~{R})-6-methyl-5-[(2~{S},4~{R},5~{R},6~{R})-6-methyl-4-[(2~{S},5~{S},6~{S})-6-methyl-5-[(2~{S},4~{R},5~{S},6~{R})-6-methyl-5-[(2~{S},4~{S},5~{S},6~{R})-6-methyl-4-[(2~{S},5~{S},6~{S})-6-methyl-5-oxidanyl-oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-4-oxidanyl-oxan-2-yl]oxy-oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-4-oxidanyl-oxan-2-yl]oxy-1,6,11-tris(oxidanyl)-5,6-dihydrobenzo[a]anthracene-7,12-dione, TetR/AcrR family transcriptional regulator
著者Uehara, S, Tsugita, A, Matsui, T, Yokoyama, T, Ostash, I, Ostash, B, Tanaka, Y.
登録日2021-05-01
公開日2022-04-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献The carbohydrate tail of landomycin A is responsible for its interaction with the repressor protein LanK.
Febs J., 289, 2022
2HX6
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BU of 2hx6 by Molmil
Solution structure analysis of the phage T4 endoribonuclease RegB
分子名称: Ribonuclease
著者Odaert, B, Saida, F, Uzan, M, Bontems, F.
登録日2006-08-02
公開日2006-10-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural and functional studies of RegB, a new member of a family of sequence-specific ribonucleases involved in mRNA inactivation on the ribosome.
J.Biol.Chem., 282, 2007
6Y6T
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BU of 6y6t by Molmil
Mouse Galactocerebrosidase complexed with galacto-noeurostegine GNS at pH 4.6
分子名称: (1~{R},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-8-azabicyclo[3.2.1]octane-1,2,3-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Deane, J.E, McLoughlin, J.
登録日2020-02-27
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The Bicyclic Form of galacto -Noeurostegine Is a Potent Inhibitor of beta-Galactocerebrosidase.
Acs Med.Chem.Lett., 12, 2021
6Y6S
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Mouse Galactocerebrosidase complexed with galacto-noeurostegine GNS at pH 6.8
分子名称: (1~{R},2~{S},3~{S},4~{R},5~{R})-4-(hydroxymethyl)-8-azabicyclo[3.2.1]octane-1,2,3-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Deane, J.E, McLoughlin, J.
登録日2020-02-27
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Bicyclic Form of galacto -Noeurostegine Is a Potent Inhibitor of beta-Galactocerebrosidase.
Acs Med.Chem.Lett., 12, 2021
8TQV
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Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor X20403
分子名称: 4-(2-{(4M)-4-[(6M)-6-(2,5-dimethoxyphenyl)pyridin-3-yl]-1H-1,2,3-triazol-1-yl}ethyl)-N-{[1-(methoxymethyl)cyclopropyl]methyl}-N-methylbenzamide, Polyketide synthase Pks13, SULFATE ION
著者Krieger, I.V, Sacchettini, J.C.
登録日2023-08-08
公開日2024-04-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibitors of the Thioesterase Activity of Mycobacterium tuberculosis Pks13 Discovered Using DNA-Encoded Chemical Library Screening.
Acs Infect Dis., 10, 2024

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