Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8GVJ
DownloadVisualize
BU of 8gvj by Molmil
Crystal structure of cMET kinase domain bound by D6808
分子名称: (1^4Z,5^2E)-6^3-(trifluoromethyl)-5^1,5^6-dihydro-1^1H-8-aza-2(3,6)-quinolina-5(1,3)-pyridazina-1(4,1)-pyrazola-6(1,4)-benzenacyclododecaphane-5^6,7-dione, Hepatocyte growth factor receptor
著者Chen, Y.H, Qu, L.Z.
登録日2022-09-15
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Discovery of D6808, a Highly Selective and Potent Macrocyclic c-Met Inhibitor for Gastric Cancer Harboring MET Gene Alteration Treatment.
J.Med.Chem., 65, 2022
8GZF
DownloadVisualize
BU of 8gzf by Molmil
Crystal Structure of METTL9-SAH
分子名称: Protein-L-histidine N-pros-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Zhao, W.T, Li, H.T.
登録日2022-09-26
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for protein histidine N1-specific methylation of the "His-x-His" motifs by METTL9.
Cell Insight, 2, 2023
8GZE
DownloadVisualize
BU of 8gze by Molmil
Crystal Structure of human METTL9-SAH-SLC39A7 peptide complex
分子名称: Protein-L-histidine N-pros-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, Zinc transporter SLC39A7
著者Zhao, W.T, Li, H.T.
登録日2022-09-26
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Molecular basis for protein histidine N1-specific methylation of the "His-x-His" motifs by METTL9.
Cell Insight, 2, 2023
8GTW
DownloadVisualize
BU of 8gtw by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound JZD-26
分子名称: (2S)-4-(3,4-dichlorophenyl)-1-[(2-oxidanylidene-1H-quinolin-4-yl)carbonyl]-N-[3,3,3-tris(fluoranyl)propyl]piperazine-2-carboxamide, 3C-like proteinase
著者Su, H.X, Nie, T.Q, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-09-08
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of novel inhibitors against SARS-CoV-2 3CLpro
To Be Published
8GTV
DownloadVisualize
BU of 8gtv by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound JZD-07
分子名称: 3C-like proteinase, 4-[(2~{S})-4-(3,4-dichlorophenyl)-2-(morpholin-4-ylmethyl)piperazin-1-yl]carbonyl-1~{H}-quinolin-2-one
著者Su, H.X, Nie, T.Q, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-09-08
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Development of novel inhibitors against SARS-CoV-2 3CLpro
To Be Published
3L0I
DownloadVisualize
BU of 3l0i by Molmil
Complex structure of SidM/DrrA with the wild type Rab1
分子名称: CHLORIDE ION, DrrA, Ras-related protein Rab-1A, ...
著者Zhu, Y, Shao, F.
登録日2009-12-10
公開日2009-12-22
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural mechanism of host Rab1 activation by the bifunctional Legionella type IV effector SidM/DrrA
Proc.Natl.Acad.Sci.USA, 107, 2010
3L0M
DownloadVisualize
BU of 3l0m by Molmil
Crystal structure of Rab1-activation domain and P4M domain of SidM/DrrA from legionella
分子名称: DrrA, SULFATE ION
著者Zhu, Y, Shao, F.
登録日2009-12-10
公開日2009-12-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Structural mechanism of host Rab1 activation by the bifunctional Legionella type IV effector SidM/DrrA
Proc.Natl.Acad.Sci.USA, 107, 2010
6I3M
DownloadVisualize
BU of 6i3m by Molmil
eIF2B:eIF2 complex, phosphorylated on eIF2 alpha serine 52.
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Adomavicius, T, Roseman, A.M, Pavitt, G.D.
登録日2018-11-06
公開日2019-05-22
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献The structural basis of translational control by eIF2 phosphorylation.
Nat Commun, 10, 2019
6I7T
DownloadVisualize
BU of 6i7t by Molmil
eIF2B:eIF2 complex
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Adomavicius, T, Guaita, M, Roseman, A.M, Pavitt, G.D.
登録日2018-11-17
公開日2019-05-22
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.61 Å)
主引用文献The structural basis of translational control by eIF2 phosphorylation.
Nat Commun, 10, 2019
6IEG
DownloadVisualize
BU of 6ieg by Molmil
Crystal structure of human MTR4
分子名称: ADENOSINE-5'-DIPHOSPHATE, Exosome RNA helicase MTR4, MAGNESIUM ION
著者Chen, J.Y, Yun, C.H.
登録日2018-09-14
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献NRDE2 negatively regulates exosome functions by inhibiting MTR4 recruitment and exosome interaction.
Genes Dev., 33, 2019
3DPC
DownloadVisualize
BU of 3dpc by Molmil
Structure of E.coli Alkaline Phosphatase Mutant in Complex with a Phosphorylated Peptide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alkaline phosphatase, PHOSPHATE ION, ...
著者Wang, W.H, Jiang, T.
登録日2008-07-07
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Development of a universal phosphorylated peptide-binding protein for simultaneous assay of kinases
Biosens.Bioelectron., 24, 2009
8ESB
DownloadVisualize
BU of 8esb by Molmil
CryoEM structure of HLA-A2 bound to MAGEA8 (232-241) peptide
分子名称: Beta-2-microglobulin,HLA class I antigen,MAGE-A8 peptide chimera
著者Saotome, K, Franklin, M.C.
登録日2022-10-13
公開日2023-05-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
8ESA
DownloadVisualize
BU of 8esa by Molmil
CryoEM structure of HLA-A2 bound to MAGEA4 (230-239) peptide
分子名称: Beta-2-microglobulin,HLA class I antigen,MAGE-A4 peptide chimera
著者Saotome, K, Franklin, M.C.
登録日2022-10-13
公開日2023-05-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
8ES9
DownloadVisualize
BU of 8es9 by Molmil
CryoEM structure of PN45428 TCR-CD3 in complex with HLA-A2 MAGEA4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
著者Saotome, K, Franklin, M.C.
登録日2022-10-13
公開日2023-05-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
8ES7
DownloadVisualize
BU of 8es7 by Molmil
CryoEM structure of PN45545 TCR-CD3 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Saotome, K, Franklin, M.C.
登録日2022-10-13
公開日2023-05-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
8ES8
DownloadVisualize
BU of 8es8 by Molmil
CryoEM structure of PN45545 TCR-CD3 in complex with HLA-A2 MAGEA4 (230-239)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
著者Saotome, K, Franklin, M.C.
登録日2022-10-13
公開日2023-05-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
2JXW
DownloadVisualize
BU of 2jxw by Molmil
Solution Structure of the Tandem WW Domains of FBP21
分子名称: WW domain-binding protein 4
著者Huang, X, Zhang, J, Wu, J, Shi, Y.
登録日2007-11-30
公開日2008-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of the two tandem WW domains of the pre-mRNA splicing factor FBP21 (formin-binding protein 21)
J.Biol.Chem., 284, 2009
5K6J
DownloadVisualize
BU of 5k6j by Molmil
Human Phospodiesterase 4B in complex with pyridyloxy-benzoxaborole based inhibitor
分子名称: 1,2-ETHANEDIOL, 6-[[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-trien-3-yl]oxy]-5-chloranyl-2-(4-oxidanylidenepentoxy)pyridine-3-carbonitrile, MAGNESIUM ION, ...
著者Rock, F.L, Zhou, Y, Sullivan, D.
登録日2016-05-24
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献To be published
To Be Published
5YIK
DownloadVisualize
BU of 5yik by Molmil
Structure of a Legionella effector with its substrate
分子名称: SdeA, ubiquitin
著者Feng, Y, Dong, Y, Liu, Z.
登録日2017-10-05
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
5YLC
DownloadVisualize
BU of 5ylc by Molmil
Crystal Structure of MCR-1 Catalytic Domain
分子名称: Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION
著者Wei, P.C, Song, G.J, Shi, M.Y, Zhou, Y.F, Liu, Y, Lei, J, Chen, P, Yin, L.
登録日2017-10-17
公開日2017-11-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Substrate analog interaction with MCR-1 offers insight into the rising threat of the plasmid-mediated transferable colistin resistance.
FASEB J., 32, 2018
5YIJ
DownloadVisualize
BU of 5yij by Molmil
Structure of a Legionella effector with substrates
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SdeA, Ubiquitin
著者Feng, Y, Mu, Y, Wang, H.
登録日2017-10-05
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structural basis of ubiquitin modification by the Legionella effector SdeA.
Nature, 557, 2018
7FFM
DownloadVisualize
BU of 7ffm by Molmil
Human serum transferrin with five osmium binding sites
分子名称: MALONATE ION, NITRILOTRIACETIC ACID, OSMIUM ION, ...
著者Wang, M, Sun, H.
登録日2021-07-23
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Binding of ruthenium and osmium at non‐iron sites of transferrin accounts for their iron-independent cellular uptake.
J.Inorg.Biochem., 234, 2022
5DOI
DownloadVisualize
BU of 5doi by Molmil
Crystal structure of Tetrahymena p45N and p19
分子名称: Telomerase associated protein p45, Telomerase-associated protein 19
著者Wan, B, Tang, T, Wu, J, Lei, M.
登録日2015-09-11
公開日2015-11-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Tetrahymena telomerase p75-p45-p19 subcomplex is a unique CST complex
Nat.Struct.Mol.Biol., 22, 2015
5YLE
DownloadVisualize
BU of 5yle by Molmil
MCR-1 complex with ethanolamine (ETA)
分子名称: ETHANOLAMINE, Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION
著者Wei, P.C, Song, G.J, Shi, M.Y, Zhou, Y.F, Liu, Y, Lei, J, Chen, P, Yin, L.
登録日2017-10-17
公開日2017-11-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate analog interaction with MCR-1 offers insight into the rising threat of the plasmid-mediated transferable colistin resistance.
FASEB J., 32, 2018
5YMR
DownloadVisualize
BU of 5ymr by Molmil
The Crystal Structure of IseG
分子名称: 2-hydroxyethylsulfonic acid, Formate acetyltransferase, GLYCEROL
著者Lin, L, Zhang, J, Xing, M, Hua, G, Guo, C, Hu, Y, Wei, Y, Ang, E, Zhao, H, Zhang, Y, Yuchi, Z.
登録日2017-10-22
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Radical-mediated C-S bond cleavage in C2 sulfonate degradation by anaerobic bacteria.
Nat Commun, 10, 2019

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon