Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3BWI
DownloadVisualize
BU of 3bwi by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with an acetate ion bound at the active site
分子名称: ACETATE ION, Botulinum neurotoxin A light chain, SULFATE ION, ...
著者Kumaran, D, Rawat, R, Swaminathan, S.
登録日2008-01-09
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3C88
DownloadVisualize
BU of 3c88 by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGC
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGC, SODIUM ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3BT3
DownloadVisualize
BU of 3bt3 by Molmil
Crystal structure of a glyoxalase-related enzyme from Clostridium phytofermentans
分子名称: Glyoxalase-related enzyme, AraC type
著者Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-12-27
公開日2008-03-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a glyoxalase-related enzyme from Clostridium phytofermentans.
To be Published
3C8B
DownloadVisualize
BU of 3c8b by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGI
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGI, SULFATE ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3C89
DownloadVisualize
BU of 3c89 by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGM
分子名称: Botulinum neurotoxin A light chain, Inhibitor peptide RRGM, SULFATE ION, ...
著者Kumaran, D, Swaminathan, S.
登録日2008-02-11
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
3CIH
DownloadVisualize
BU of 3cih by Molmil
Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Putative alpha-rhamnosidase
著者Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-03-11
公開日2008-04-01
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron.
To be Published
3CLK
DownloadVisualize
BU of 3clk by Molmil
Crystal structure of a transcription regulator from Lactobacillus plantarum
分子名称: GLYCEROL, Transcription regulator
著者Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-03-19
公開日2008-04-01
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structure of a transcription regulator from lactobacillus plantarum.
To be Published
3CO4
DownloadVisualize
BU of 3co4 by Molmil
Crystal structure of a chitinase from Bacteroides thetaiotaomicron
分子名称: 2-amino-2-deoxy-beta-D-glucopyranose, Chitinase
著者Damodharan, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-03-27
公開日2008-04-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structure of a chitinase from Bacteroides thetaiotaomicron.
To be Published
2F4N
DownloadVisualize
BU of 2f4n by Molmil
Crystal structure of protein MJ1651 from Methanococcus jannaschii DSM 2661, Pfam DUF62
分子名称: Hypothetical protein MJ1651
著者Rao, K.N, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-11-23
公開日2005-12-06
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a conserved protein of unknown function (MJ1651) from Methanococcus jannaschii.
Proteins, 70, 2008
8GOD
DownloadVisualize
BU of 8god by Molmil
Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589
分子名称: Protein-arginine deiminase type-4, [(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone
著者Swaminathan, S, Birudukota, S, Vaithilingam, K, Kandan, S, Asaithambi, K, Kathiresan, N, Gosu, R, Rajagopal, S, Sadhu, N.
登録日2022-08-24
公開日2023-03-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Alleviation of arthritis through prevention of neutrophil extracellular traps by an orally available inhibitor of protein arginine deiminase 4.
Sci Rep, 13, 2023
7TLT
DownloadVisualize
BU of 7tlt by Molmil
SARS-CoV-2 Spike-derived peptide S489-497 (YFPLQSYGF) presented by HLA-A*29:02
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A alpha chain, ...
著者Murdolo, L.D, Szeto, C, Gras, S.
登録日2022-01-18
公開日2022-10-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ablation of CD8 + T cell recognition of an immunodominant epitope in SARS-CoV-2 Omicron variants BA.1, BA.2 and BA.3.
Nat Commun, 13, 2022
3TGY
DownloadVisualize
BU of 3tgy by Molmil
Crystal structure of the complex of Bovine Lactoperoxidase with Ascorbic acid at 2.35 A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yamini, S, Singh, R.P, Singh, A.K, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-08-18
公開日2011-09-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of bovine lactoperoxidase with a partially linked heme moiety at 1.98 angstrom resolution.
Biochim.Biophys.Acta, 1865, 2017
1AXV
DownloadVisualize
BU of 1axv by Molmil
SOLUTION NMR STRUCTURE OF THE [BP]DA ADDUCT OPPOSITE DT IN A DNA DUPLEX, 6 STRUCTURES
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA DUPLEX D(CTCTC-[BP]A-CTTCC)D(GGAAGTGAGAG)
著者Mao, B, Gu, Z, Gorin, A.A, Chen, J, Hingerty, B.E, Amid, S, Broyde, S, Geacintov, N.E, Patel, D.J.
登録日1997-10-21
公開日1998-07-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the (+)-cis-anti-benzo[a]pyrene-dA ([BP]dA) adduct opposite dT in a DNA duplex.
Biochemistry, 38, 1999
3UIL
DownloadVisualize
BU of 3uil by Molmil
Crystal Structure of the complex of PGRP-S with lauric acid at 2.2 A resolution
分子名称: GLYCEROL, LAURIC ACID, Peptidoglycan recognition protein 1
著者Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-11-05
公開日2012-07-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
7SSC
DownloadVisualize
BU of 7ssc by Molmil
TRL345 lineage ancestor I8 Fab bound to an HCMV gB-derived peptide
分子名称: Envelope glycoprotein B peptide, GLYCEROL, TRL345-I8 Fab heavy chain, ...
著者Sponholtz, M.R, McLellan, J.S.
登録日2021-11-10
公開日2022-10-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A single, improbable B cell receptor mutation confers potent neutralization against cytomegalovirus.
Plos Pathog., 19, 2023
7XU8
DownloadVisualize
BU of 7xu8 by Molmil
Structure of the complex of camel peptidoglycan recognition protein-short (PGRP-S) with heptanoic acid at 2.15 A resolution.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CARBONATE ION, ...
著者Maurya, A, Ahmad, N, Viswanathan, V, Singh, P.K, Yamini, S, Sharma, P, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2022-05-18
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Ligand recognition by peptidoglycan recognition protein-S (PGRP-S): structure of the complex of camel PGRP-S with heptanoic acid at 2.15 angstrom resolution.
Int J Biochem Mol Biol, 13, 2022
1PVD
DownloadVisualize
BU of 1pvd by Molmil
CRYSTAL STRUCTURE OF THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE FROM THE YEAST SACCHAROMYCES CEREVISIAE AT 2.3 ANGSTROMS RESOLUTION
分子名称: MAGNESIUM ION, PYRUVATE DECARBOXYLASE, THIAMINE DIPHOSPHATE
著者Furey, W, Arjunan, P.
登録日1995-04-20
公開日1995-07-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution.
J.Mol.Biol., 256, 1996
1PYD
DownloadVisualize
BU of 1pyd by Molmil
CATALYTIC CENTERS IN THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE AT 2.4 ANGSTROMS RESOLUTION
分子名称: MAGNESIUM ION, PYRUVATE DECARBOXYLASE, THIAMINE DIPHOSPHATE
著者Furey, W, Dyda, F.
登録日1993-03-23
公開日1994-04-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Catalytic centers in the thiamin diphosphate dependent enzyme pyruvate decarboxylase at 2.4-A resolution.
Biochemistry, 32, 1993
3JTY
DownloadVisualize
BU of 3jty by Molmil
Crystal structure of a BenF-like porin from Pseudomonas fluorescens Pf-5
分子名称: BenF-like porin, LAURYL DIMETHYLAMINE-N-OXIDE
著者Sampathkumar, P, Lu, F, Zhao, X, Wasserman, S, Iuzuka, M, Bain, K, Rutter, M, Gheyi, T, Atwell, S, Luz, J, Gilmore, J, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-09-14
公開日2009-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 A resolution.
Proteins, 78, 2010
5LG9
DownloadVisualize
BU of 5lg9 by Molmil
Structure of PfIMP2 (Immune Mapped Protein 2 from Plasmodium falciparum) - an antigenic protein
分子名称: Uncharacterized protein
著者Benjamin, S.V, Matthews, S.J.
登録日2016-07-06
公開日2016-12-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Toxoplasma gondii immune mapped protein 1 is anchored to the inner leaflet of the plasma membrane and adopts a novel protein fold.
Biochim. Biophys. Acta, 1865, 2016
2NM1
DownloadVisualize
BU of 2nm1 by Molmil
Structure of BoNT/B in complex with its protein receptor
分子名称: Botulinum neurotoxin type B, Synaptotagmin-2
著者Jin, R, Rummel, A, Binz, T, Brunger, A.T.
登録日2006-10-20
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Botulinum neurotoxin B recognizes its protein receptor with high affinity and specificity.
Nature, 444, 2006
2HHL
DownloadVisualize
BU of 2hhl by Molmil
Crystal structure of the human small CTD phosphatase 3 isoform 1
分子名称: 12-TUNGSTOPHOSPHATE, CTD small phosphatase-like protein
著者Malashkevich, V.N, Toro, R, Ramagopal, U, Sauder, J.M, Schwinn, K.D, Thompson, D.A, Rutter, M.E, Dickey, M, Groshong, C, Bain, K.T, Adams, J.M, Reyes, C, Rooney, I, Powell, A, Boice, A, Gheyi, T, Ozyurt, S, Atwell, S, Wasserman, S.R, Emtage, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-06-28
公開日2006-08-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
2I1Y
DownloadVisualize
BU of 2i1y by Molmil
Crystal structure of the phosphatase domain of human PTP IA-2
分子名称: GLYCEROL, Receptor-type tyrosine-protein phosphatase
著者Faber-Barata, J, Patskovsky, Y, Alvarado, J, Smith, D, Koss, J, Wasserman, S.R, Ozyurt, S, Atwell, S, Powell, A, Kearins, M.C, Maletic, M, Rooney, I, Bain, K.T, Freeman, M, Russell, J.C, Thompson, D.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-08-15
公開日2006-08-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structural genomics of protein phosphatases
J.STRUCT.FUNCT.GENOM., 8, 2007
2IRM
DownloadVisualize
BU of 2irm by Molmil
Crystal structure of mitogen-activated protein kinase kinase kinase 7 interacting protein 1 from Anopheles gambiae
分子名称: mitogen-activated protein kinase kinase kinase 7 interacting protein 1
著者Jin, X, Bonanno, J.B, Pelletier, L, Freeman, J.C, Wasserman, S, Sauder, J.M, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-10-15
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
2IQ1
DownloadVisualize
BU of 2iq1 by Molmil
Crystal structure of human PPM1K
分子名称: MAGNESIUM ION, Protein phosphatase 2C kappa, PPM1K
著者Bonanno, J.B, Freeman, J, Russell, M, Bain, K.T, Adams, J, Pelletier, L, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-10-12
公開日2006-11-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural genomics of protein phosphatases
J.STRUCT.FUNCT.GENOM., 8, 2007

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon