Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2KFH
DownloadVisualize
BU of 2kfh by Molmil
Structure of the C-terminal domain of EHD1 with FNYESTGPFTAK
分子名称: CALCIUM ION, EH domain-containing protein 1, Rab11-FIP2 GPF peptide FNYESTGPFTAK
著者Kieken, F, Jovic, M, Tonelli, M, Naslavsky, N, Caplan, S, Sorgen, P.
登録日2009-02-20
公開日2009-12-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insight into the interaction of proteins containing NPF, DPF, and GPF motifs with the C-terminal EH-domain of EHD1.
Protein Sci., 18, 2009
2KFF
DownloadVisualize
BU of 2kff by Molmil
Structure of the C-terminal domain of EHD1 with FNYESTNPFTAK
分子名称: CALCIUM ION, EH domain-containing protein 1, Rab11-FIP2 NPF peptide FNYESTNPFTAK
著者Kieken, F, Jovic, M, Tonelli, M, Naslavsky, N, Caplan, S, Sorgen, P.
登録日2009-02-20
公開日2009-12-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insight into the interaction of proteins containing NPF, DPF, and GPF motifs with the C-terminal EH-domain of EHD1.
Protein Sci., 18, 2009
2KYQ
DownloadVisualize
BU of 2kyq by Molmil
1H, 15N, 13C chemical shifts and structure of CKR-brazzein
分子名称: Defensin-like protein
著者Dittli, S.M, Assadi-Porter, F.M, Rao, H, Tonelli, M.
登録日2010-06-07
公開日2011-05-18
最終更新日2011-11-30
実験手法SOLUTION NMR
主引用文献Structural role of the terminal disulfide bond in the sweetness of brazzein.
Chem Senses, 36, 2011
2L07
DownloadVisualize
BU of 2l07 by Molmil
1H, 13C, and 15N chemical shifts and structure of brazzein-derived peptide CKR-PNG
分子名称: Defensin-like protein
著者Dittli, S.M, Assadi-Porter, F.M, Rao, H, Tonelli, M.
登録日2010-06-30
公開日2011-06-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural role of the terminal disulfide bond in the sweetness of brazzein.
Chem Senses, 36, 2011
2KGQ
DownloadVisualize
BU of 2kgq by Molmil
Refined solution structure of des-pyro Glu brazzein
分子名称: Brazzein
著者Cornilescu, C.C, Tonelli, M, DeRider, M.L, Markley, J.L, Assadi-Porter, F.M, Center for Eukaryotic Structural Genomics (CESG)
登録日2009-03-13
公開日2009-06-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Refined solution structure of des-pyro Glu brazzein
To be Published
2KNH
DownloadVisualize
BU of 2knh by Molmil
The Solution structure of the eTAFH domain of AML1-ETO complexed with HEB peptide
分子名称: Protein CBFA2T1, Transcription factor 12
著者Park, S, Cierpicki, T, Tonelli, M, Bushweller, J.H.
登録日2009-08-25
公開日2009-10-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the AML1-ETO eTAFH domain-HEB peptide complex and its contribution to AML1-ETO activity.
Blood, 113, 2009
2KMW
DownloadVisualize
BU of 2kmw by Molmil
Solution structure of At3g03773.1 protein from Arabidopsis thaliana
分子名称: Uncharacterized protein At3g03773
著者Sahu, S.C, Singh, S, Tonelli, M, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2009-08-05
公開日2009-10-06
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of At3g03773.1 protein from Arabidopsis thaliana
To be Published
2KQK
DownloadVisualize
BU of 2kqk by Molmil
Solution structure of apo-IscU(D39A)
分子名称: NifU-like protein
著者Kim, J.H, Fuzery, A.K, Tonelli, M, Vickery, L.E, Markley, J.L.
登録日2009-11-10
公開日2010-11-17
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Three-Dimensional Structure and Determinants of Stability of the Iron-Sulfur Cluster Scaffold Protein IscU from Escherichia coli.
Biochemistry, 51, 2012
2KSI
DownloadVisualize
BU of 2ksi by Molmil
Solution NMR structure of Sterol Carrier Protein - 2 from Aedes aegypti (AeSCP-2) complex with C16 fatty acid (palmitate)
分子名称: PALMITIC ACID, Sterol carrier protein 2
著者Singarapu, K, Radek, J.T, Tonelli, M, Lan, Q, Markley, J.L.
登録日2010-01-04
公開日2010-03-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Sterol Carrier Protein - 2 from Aedes aegypti (AeSCP-2) complex with C16 fatty acid (palmitate)
To be Published
2GM0
DownloadVisualize
BU of 2gm0 by Molmil
Linear dimer of stemloop SL1 from HIV-1
分子名称: RNA (35-MER)
著者Ulyanov, N.B, Mujeeb, A, Du, Z, Tonelli, M, Parslow, T.G, James, T.L.
登録日2006-04-05
公開日2006-04-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of the Full-length Linear Dimer of Stem-Loop-1 RNA in the HIV-1 Dimer Initiation Site.
J.Biol.Chem., 281, 2006
2KSH
DownloadVisualize
BU of 2ksh by Molmil
Solution NMR structure of apo Sterol Carrier Protein - 2 from Aedes aegypti (AeSCP-2)
分子名称: Sterol carrier protein 2
著者Singarapu, N, Radek, J.T, Tonelli, M, Lan, Q, Markley, J.L.
登録日2010-01-04
公開日2010-03-31
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution NMR structure of apo Sterol Carrier Protein - 2 from Aedes aegypti (AeSCP-2)
To be Published
2L94
DownloadVisualize
BU of 2l94 by Molmil
Structure of the HIV-1 frameshift site RNA bound to a small molecule inhibitor of viral replication
分子名称: N'-{(Z)-amino[4-(amino{[3-(dimethylammonio)propyl]iminio}methyl)phenyl]methylidene}-N,N-dimethylpropane-1,3-diaminium, RNA_(45-MER)
著者Marcheschi, R.J, Tonelli, M, Kumar, A, Butcher, S.E.
登録日2011-01-29
公開日2011-06-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the HIV-1 Frameshift Site RNA Bound to a Small Molecule Inhibitor of Viral Replication.
Acs Chem.Biol., 6, 2011
2L4X
DownloadVisualize
BU of 2l4x by Molmil
Solution Structure of apo-IscU(WT)
分子名称: Iron-sulfur cluster assembly scaffold protein
著者Kim, J.H, Tonelli, M, Markley, J.L.
登録日2010-10-19
公開日2011-12-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Three-Dimensional Structure and Determinants of Stability of the Iron-Sulfur Cluster Scaffold Protein IscU from Escherichia coli.
Biochemistry, 51, 2012
2LE4
DownloadVisualize
BU of 2le4 by Molmil
Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2
分子名称: Transcription factor SOX-2
著者Sahu, S.C, Markley, J.L, Tonelli, M, Bahrami, A, Eghbalnia, H.R, Center for Eukaryotic Structural Genomics (CESG)
登録日2011-06-06
公開日2011-07-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2
To be Published
2L9Q
DownloadVisualize
BU of 2l9q by Molmil
Structural Characterization of small heat shock protein (Hsp12)
分子名称: 12 kDa heat shock protein
著者Singarapu, K.K, Tonelli, M, Westler, W.M, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2011-02-22
公開日2011-06-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Characterization of small heat shock protein (Hsp12)
To be Published
7THM
DownloadVisualize
BU of 7thm by Molmil
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
分子名称: MANGANESE (II) ION, Non-structural protein 7, Non-structural protein 8, ...
著者Osinski, A, Tagliabracci, V.S, Chen, Z, Li, Y.
登録日2022-01-11
公開日2022-03-16
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献The mechanism of RNA capping by SARS-CoV-2.
Nature, 609, 2022
6VEO
DownloadVisualize
BU of 6veo by Molmil
ATAD2B bromodomain in complex with 4-({[(3R,4R)-4-{[3-methyl-5-(5-methylpyridin-3-yl)-2-oxo-1,2-dihydro-1,7-naphthyridin-8-yl]amino}piperidin-3-yl]oxy}methyl)-1lambda~6~-thiane-1,1-dione (compound 38)
分子名称: 4-({[(3R,4R)-4-{[3-methyl-5-(5-methylpyridin-3-yl)-2-oxo-1,2-dihydro-1,7-naphthyridin-8-yl]amino}piperidin-3-yl]oxy}methyl)-1lambda~6~-thiane-1,1-dione, ATPase family AAA domain-containing protein 2B, SULFATE ION
著者Glass, K.C.
登録日2020-01-02
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insights into the Recognition of Mono- and Diacetylated Histones by the ATAD2B Bromodomain.
J.Med.Chem., 63, 2020
2WC2
DownloadVisualize
BU of 2wc2 by Molmil
Nmr structure of catabolite activator protein in the unliganded state
分子名称: CATABOLITE GENE ACTIVATOR
著者Popovych, N, Tzeng, S.R, Kalodimos, C.G.
登録日2009-03-06
公開日2009-04-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for Camp-Mediated Allosteric Control of the Catabolite Activator Protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
8OF2
DownloadVisualize
BU of 8of2 by Molmil
Trypanosoma brucei pteridine reductase 1 (TbPTR1) in complex with 2,4,6 triamminopyrimidine (TAP)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Tassone, G, Landi, G, Mangani, S, Pozzi, C.
登録日2023-03-13
公開日2023-12-13
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献The discovery of aryl-2-nitroethyl triamino pyrimidines as anti-Trypanosoma brucei agents.
Eur.J.Med.Chem., 264, 2023
3IAW
DownloadVisualize
BU of 3iaw by Molmil
Crystal structure of a chemically synthesized 203 amino acid 'covalent dimer' [Gly51;Aib51']HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor at 1.6 A resolution
分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, SULFATE ION, [Gly51;Aib51'] 'covalent dimer' HIV-1 protease
著者Torbeev, V.Y, Kent, S.B.H.
登録日2009-07-14
公開日2011-04-27
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Protein conformational dynamics in the mechanism of HIV-1 protease catalysis.
Proc.Natl.Acad.Sci.USA, 108, 2011
3KA2
DownloadVisualize
BU of 3ka2 by Molmil
Crystal structure of chemically synthesized 203 amino acid 'covalent dimer' [L-Ala;Gly51']HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor at 1.4 A resolution
分子名称: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, [L-Ala51;Gly51']HIV-1 protease
著者Torbeev, V.Y, Kent, S.B.H.
登録日2009-10-18
公開日2011-04-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Protein conformational dynamics in the mechanism of HIV-1 protease catalysis.
Proc.Natl.Acad.Sci.USA, 108, 2011
3HLO
DownloadVisualize
BU of 3hlo by Molmil
Crystal structure of chemically synthesized 'covalent dimer' [Gly51/D-Ala51']HIV-1 protease
分子名称: 'covalent dimer' [Gly51/D-Ala51'] HIV-1 protease, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
著者Torbeev, V.Y, Kent, S.B.H.
登録日2009-05-27
公開日2011-07-27
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein conformational dynamics in the mechanism of HIV-1 protease catalysis.
Proc.Natl.Acad.Sci.USA, 108, 2011
7M98
DownloadVisualize
BU of 7m98 by Molmil
ATAD2 bromodomain complexed with histone H4K5ac (res 1-10) ligand
分子名称: ATPase family AAA domain-containing protein 2, Histone H4
著者Malone, K.L, Phillips, M, Nix, J.C, Glass, K.C.
登録日2021-03-30
公開日2021-09-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Coordination of Di-Acetylated Histone Ligands by the ATAD2 Bromodomain.
Int J Mol Sci, 22, 2021
7OPJ
DownloadVisualize
BU of 7opj by Molmil
Trypanosoma brucei PTR1 (TbPTR1) in complex with pyrimethamine
分子名称: 5-(4-CHLORO-PHENYL)-6-ETHYL-PYRIMIDINE-2,4-DIAMINE, ACETATE ION, GLYCEROL, ...
著者Tassone, G, Landi, G, Pozzi, C, Mangani, S.
登録日2021-05-31
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Evidence of Pyrimethamine and Cycloguanil Analogues as Dual Inhibitors of Trypanosoma brucei Pteridine Reductase and Dihydrofolate Reductase.
Pharmaceuticals, 14, 2021
4IBG
DownloadVisualize
BU of 4ibg by Molmil
Ebola virus VP35 bound to small molecule
分子名称: GLYCEROL, PHOSPHATE ION, Polymerase cofactor VP35, ...
著者Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
登録日2012-12-08
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon