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1L9V
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BU of 1l9v by Molmil
Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA binding and nucleic acid helix-destabilizing protein
分子名称: Rotavirus-NSP2
著者Jayaram, H, Taraporewala, Z, Patton, J.T, Prasad, B.V.
登録日2002-03-26
公開日2002-06-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Rotavirus protein involved in genome replication and packaging exhibits a HIT-like fold.
Nature, 417, 2002
5HAP
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BU of 5hap by Molmil
OXA-48 beta-lactamase - S70A mutant
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Beta-lactamase, ...
著者Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2015-12-30
公開日2016-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain.
Biochemistry, 55, 2016
5HAR
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BU of 5har by Molmil
OXA-163 beta-lactamase - S70G mutant
分子名称: ACETATE ION, Beta-lactamase, CHLORIDE ION
著者Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2015-12-30
公開日2016-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain.
Biochemistry, 55, 2016
5HAQ
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BU of 5haq by Molmil
OXa-48 beta-lactamase mutant - S70G
分子名称: Beta-lactamase, CADMIUM ION, FORMIC ACID
著者Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2015-12-30
公開日2016-09-07
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain.
Biochemistry, 55, 2016
5HAI
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BU of 5hai by Molmil
P99 beta-lactamase mutant - S64G
分子名称: Beta-lactamase, PHOSPHATE ION
著者Stojanoski, V, Adamski, C.J, Hu, L, Mehta, S.C, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2015-12-30
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine beta-Lactamases by Relieving Steric Strain.
Biochemistry, 55, 2016
7RSW
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BU of 7rsw by Molmil
Crystal structure of group B human rotavirus VP8*
分子名称: Outer capsid protein VP4, peptide
著者Hu, L, Salmen, W, Sankaran, B, Prasad, B.V.
登録日2021-08-11
公開日2022-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography.
Commun Biol, 5, 2022
5VX4
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BU of 5vx4 by Molmil
VP8* of a G2P[4] Human Rotavirus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
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BU of 5vx8 by Molmil
VP8* of P[6] Human Rotavirus RV3
分子名称: Outer capsid protein VP4, SULFATE ION
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX5
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BU of 5vx5 by Molmil
VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
2GE7
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BU of 2ge7 by Molmil
Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
分子名称: Nucleocapsid protein
著者Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
登録日2006-03-18
公開日2006-06-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2GX9
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BU of 2gx9 by Molmil
X-ray structure of influenza virus NS1 effector domain
分子名称: NS1 Effector Domain, THIOCYANATE ION
著者Bornholdt, Z.A, Prasad, B.V.
登録日2006-05-08
公開日2006-05-30
最終更新日2020-09-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray structure of influenza virus NS1 effector domain.
Nat.Struct.Mol.Biol., 13, 2006
6PCU
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BU of 6pcu by Molmil
VP8* of a G2P[4] human rotavirus in complex with scFv antibody 9
分子名称: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
著者Hu, L, Venkataram Prasad, B.V.
登録日2019-06-18
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human VP8* mAbs neutralize rotavirus selectively in human intestinal epithelial cells.
J.Clin.Invest., 130, 2019
3JYI
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BU of 3jyi by Molmil
Structural and biochemical evidence that a TEM-1 {beta}-lactamase Asn170Gly active site mutant acts via substrate-assisted catalysis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase TEM, PHOSPHATE ION
著者Brown, N.G, Palzkill, T.G, Prasad, B.V.V, Shanker, S.
登録日2009-09-21
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural and biochemical evidence that a TEM-1 beta-lactamase N170G active site mutant acts via substrate-assisted catalysis
J.Biol.Chem., 284, 2009
7UON
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BU of 7uon by Molmil
CTX-M-14 Y105W mutant
分子名称: Beta-lactamase, PHOSPHATE ION
著者Judge, A, Hu, L, Sankaran, B, Van Riper, J, Prasad, B.V.V, Palzkill, T.
登録日2022-04-13
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M beta-lactamase.
Commun Biol, 6, 2023
3M8L
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BU of 3m8l by Molmil
Crystal Structure Analysis of the Feline Calicivirus Capsid Protein
分子名称: Capsid protein
著者Zhou, Y, Prasad, B.V.V.
登録日2010-03-18
公開日2010-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Conformational changes in the capsid of a calicivirus upon interaction with its functional receptor
J.Virol., 84, 2010
4YG0
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BU of 4yg0 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG3
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BU of 4yg3 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, SULFATE ION
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG6
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BU of 4yg6 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP8*, PHOSPHATE ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YFW
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BU of 4yfw by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YE2
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BU of 4ye2 by Molmil
The 1.35 structure of a viral RNase L antagonist reveals basis for the 2'-5'-oligoadenylate binding and enzyme activity.
分子名称: ADENOSINE-2'-5'-DIPHOSPHATE, Capping enzyme protein, SULFATE ION
著者Hu, L, Sankaran, B, Prasad, B.V.V.
登録日2015-02-23
公開日2015-04-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.098 Å)
主引用文献Structural basis for 2'-5'-oligoadenylate binding and enzyme activity of a viral RNase L antagonist.
J.Virol., 89, 2015
4YFZ
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BU of 4yfz by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4DS0
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BU of 4ds0 by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4DRV
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BU of 4drv by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4DRR
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BU of 4drr by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, SODIUM ION
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4F6H
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BU of 4f6h by Molmil
Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-b-lactamase active site
分子名称: Beta-lactamase, PHOSPHATE ION, SULFATE ION, ...
著者Horton, L.B, Shanker, S, Sankaran, B, Mikulski, R, Brown, N.G, Phillips, K, Lykissa, E, Prasad, B.V.V, Palzkill, T.G.
登録日2012-05-14
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.744 Å)
主引用文献Mutagenesis of zinc ligand residue Cys221 reveals plasticity in the IMP-1 metallo-beta-lactamase active site
Antimicrob.Agents Chemother., 56, 2012

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