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2I69
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BU of 2i69 by Molmil
Crystal structure of the West Nile virus envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Polyprotein
著者Kanai, R, Modis, Y.
登録日2006-08-28
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Crystal structure of west nile virus envelope glycoprotein reveals viral surface epitopes.
J.Virol., 80, 2006
3M45
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BU of 3m45 by Molmil
Crystal structure of Ig1 domain of mouse SynCAM 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 2
著者Yue, L, Modis, Y.
登録日2010-03-10
公開日2010-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献N-glycosylation at the SynCAM (synaptic cell adhesion molecule) immunoglobulin interface modulates synaptic adhesion.
J.Biol.Chem., 285, 2010
6T1B
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BU of 6t1b by Molmil
Crystal structure of YlmD from Geobacillus stearothermophilus in complex with inosine
分子名称: INOSINE, YlmD, ZINC ION
著者Reikine, S, Modis, Y.
登録日2019-10-03
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献FAMIN Is a Multifunctional Purine Enzyme Enabling the Purine Nucleotide Cycle.
Cell, 180, 2020
6T0Y
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BU of 6t0y by Molmil
Crystal structure of YlmD from Geobacillus stearothermophilus
分子名称: Polyphenol oxidase, ZINC ION
著者Reikine, S, Modis, Y.
登録日2019-10-03
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献FAMIN Is a Multifunctional Purine Enzyme Enabling the Purine Nucleotide Cycle.
Cell, 180, 2020
6TL1
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BU of 6tl1 by Molmil
Crystal structure of the TASOR pseudo-PARP domain
分子名称: GLYCEROL, Protein TASOR
著者Douse, C.H, Timms, R.T, Freund, S.M.V, Modis, Y.
登録日2019-11-29
公開日2020-09-16
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献TASOR is a pseudo-PARP that directs HUSH complex assembly and epigenetic transposon control.
Nat Commun, 11, 2020
5VSM
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BU of 5vsm by Molmil
Crystal structure of viperin with bound [4Fe-4S] cluster, 5'-deoxyadenosine, and L-methionine
分子名称: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
著者Fenwick, M.K, Li, Y, Cresswell, P, Modis, Y, Ealick, S.E.
登録日2017-05-11
公開日2017-06-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural studies of viperin, an antiviral radical SAM enzyme.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5VSL
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BU of 5vsl by Molmil
Crystal structure of viperin with bound [4Fe-4S] cluster and S-adenosylhomocysteine (SAH)
分子名称: IRON/SULFUR CLUSTER, Radical S-adenosyl methionine domain-containing protein 2, S-ADENOSYL-L-HOMOCYSTEINE
著者Fenwick, M.K, Li, Y, Cresswell, P, Modis, Y, Ealick, S.E.
登録日2017-05-11
公開日2017-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.972 Å)
主引用文献Structural studies of viperin, an antiviral radical SAM enzyme.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6G1X
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BU of 6g1x by Molmil
CryoEM structure of the MDA5-dsRNA filament with 91-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-22
公開日2018-11-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6G1S
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BU of 6g1s by Molmil
CryoEM structure of the MDA5-dsRNA filament with 87-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-21
公開日2018-11-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
6G19
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BU of 6g19 by Molmil
CryoEM structure of the MDA5-dsRNA filament with 74-degree helical twist
分子名称: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3'), ...
著者Yu, Q, Qu, K, Modis, Y.
登録日2018-03-20
公開日2018-11-21
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis.
Mol. Cell, 72, 2018
7BKQ
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BU of 7bkq by Molmil
CryoEM structure of MDA5-dsRNA filament in complex with ADP with 92-degree helical twist
分子名称: ADENOSINE-5'-DIPHOSPHATE, Isoform 2 of Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-01-17
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7BKP
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BU of 7bkp by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
著者Singh, R, Herrero del Valle, A, Yu, Q, Modis, Y.
登録日2021-01-16
公開日2021-11-17
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7NIC
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BU of 7nic by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ADP-AlF4(minor class)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*GP*UP*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*A)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-11
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7NIQ
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BU of 7niq by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ADP-AlF4(Major class)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*AP*UP*CP*UP*CP*CP*UP*CP*GP*GP*CP*UP*UP*G)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-13
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
7NGA
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BU of 7nga by Molmil
CryoEM structure of the MDA5-dsRNA filament in complex with ADP with 88-degree helical twist
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*AP*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*G)-3'), ...
著者Yu, Q, Modis, Y.
登録日2021-02-08
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
3NEC
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BU of 3nec by Molmil
Crystal Structure of Toxoplasma gondii Profilin
分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Inflammatory profilin, SULFATE ION
著者Kucera, K, Modis, Y.
登録日2010-06-08
公開日2010-09-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-based analysis of Toxoplasma gondii profilin: a parasite-specific motif is required for recognition by Toll-like receptor 11.
J.Mol.Biol., 403, 2010
3NSW
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BU of 3nsw by Molmil
Crystal Structure of Ancylostoma ceylanicum Excretory-Secretory Protein 2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Excretory-secretory protein 2
著者Kucera, K, Modis, Y.
登録日2010-07-02
公開日2011-05-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Ancylostoma ceylanicum Excretory-Secretory Protein 2 Adopts a Netrin-Like Fold and Defines a Novel Family of Nematode Proteins.
J.Mol.Biol., 408, 2011
4JNT
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BU of 4jnt by Molmil
Crystal structure of the ectodomain of Bovine viral diarrhea virus 1 E2 envelope protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2
著者Li, Y, Wang, J, Modis, Y.
登録日2013-03-15
公開日2013-04-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.09 Å)
主引用文献Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
1RHZ
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BU of 1rhz by Molmil
The structure of a protein conducting channel
分子名称: Preprotein translocase secE subunit, Preprotein translocase secY subunit, SecBeta
著者van den Berg, B, Clemons Jr, W.M, Collinson, I, Modis, Y, Hartmann, E, Harrison, S.C, Rapoport, T.A.
登録日2003-11-15
公開日2004-01-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献X-ray structure of a protein-conducting channel.
Nature, 427, 2004
1RH5
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BU of 1rh5 by Molmil
The structure of a protein conducting channel
分子名称: Preprotein translocase secE subunit, Preprotein translocase secY subunit, SecBeta
著者van den Berg, B, Clemons Jr, W.M, Collinson, I, Modis, Y, Hartmann, E, Harrison, S.C, Rapoport, T.A.
登録日2003-11-13
公開日2004-01-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献X-ray structure of a protein-conducting channel
Nature, 427, 2004
4DQJ
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BU of 4dqj by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (in complex with chitotetraose)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, Membrane protein Phi6 P5
著者Dessau, M.A, Modis, Y.
登録日2012-02-16
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
4DQ5
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BU of 4dq5 by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (WT)
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, Membrane protein Phi6 P5wt
著者Dessau, M.A, Modis, Y.
登録日2012-02-15
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.395 Å)
主引用文献Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
4DQ7
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BU of 4dq7 by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (V207F mutant)
分子名称: Membrane protein Phi6 P5
著者Dessau, M.A, Modis, Y.
登録日2012-02-15
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
4FH8
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BU of 4fh8 by Molmil
Crystal Structure of Peroxiredoxin-1 from the human hookworm Ancylostoma ceylanicum
分子名称: AcePrx-1
著者Nguyen, J.B, Modis, Y.
登録日2012-06-05
公開日2013-06-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Peroxiredoxin-1 from the Human Hookworm Ancylostoma ceylanicum Forms a Stable Oxidized Decamer and Is Covalently Inhibited by Conoidin A.
Chem.Biol., 20, 2013
4HJC
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Crystal structure of glycoprotein C from Rift Valley Fever Virus (non-glycosylated)
分子名称: ENVELOPE GLYCOPROTEIN
著者Dessau, M, Modis, Y.
登録日2012-10-12
公開日2013-01-16
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (4.15 Å)
主引用文献Crystal structure of glycoprotein C from Rift Valley fever virus.
Proc.Natl.Acad.Sci.USA, 110, 2013

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