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2JY5
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BU of 2jy5 by Molmil
NMR structure of Ubiquilin 1 UBA domain
分子名称: Ubiquilin-1
著者Zhang, D, Raasi, S, Fushman, D.
登録日2007-12-06
公開日2008-03-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains
J.Mol.Biol., 377, 2008
7RBR
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BU of 7rbr by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with a Lys48-linked di-ubiquitin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Papain-like protease, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lanham, B.T, Wydorski, P, Fushman, D, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-06
公開日2021-09-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
7S6O
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BU of 7s6o by Molmil
The crystal structure of Lys48-linked di-ubiquitin
分子名称: ACETATE ION, Ubiquitin
著者Osipiuk, J, Tesar, C, Lanham, B.T, Wydorski, P, Fushman, D, Joachimiak, L, Joachimiak, A.
登録日2021-09-14
公開日2021-09-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
2MRO
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BU of 2mro by Molmil
Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1)
分子名称: DNA damage-inducible protein 1, Polyubiquitin-B
著者Zhang, D, Fushman, D.
登録日2014-07-14
公開日2015-02-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2MR9
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BU of 2mr9 by Molmil
NMR structure of UBA domain of DNA-damage-inducible 1 protein (Ddi1)
分子名称: DNA damage-inducible protein 1
著者Zhang, D, Fushman, D.
登録日2014-07-02
公開日2015-02-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2MRP
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BU of 2mrp by Molmil
NMR solution structure of the Ubiquitin like domain (UBL) of DNA-damage-inducible 1 protein (Ddi1)
分子名称: DNA damage-inducible protein 1
著者Nowicka, U, Fushman, D, Chen, T.
登録日2014-07-14
公開日2015-03-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2KDF
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BU of 2kdf by Molmil
NMR structure of minor S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2KDE
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BU of 2kde by Molmil
NMR structure of major S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
6UD0
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BU of 6ud0 by Molmil
Solution-state NMR structural ensemble of human Tsg101 UEV in complex with K63-linked diubiquitin
分子名称: Tumor susceptibility gene 101 protein, Ubiquitin
著者Strickland, M, Watanabe, S, Bonn, S.M, Camara, C.M, Fushman, D, Carter, C.A, Tjandra, N.
登録日2019-09-18
公開日2021-03-17
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Tsg101/ESCRT-I Recruitment Regulated by the Dual Binding Modes of K63-Linked Diubiquitin
Structure, 2021
2MBO
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BU of 2mbo by Molmil
K11-linked Diubiquitin average solution structure at pH 6.8, 0 mM NaCl
分子名称: Ubiquitin
著者Castaneda, C.A, Fushman, D.
登録日2013-08-02
公開日2013-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unique structural, dynamical, and functional properties of k11-linked polyubiquitin chains.
Structure, 21, 2013
2MBQ
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BU of 2mbq by Molmil
K11-linked Diubiquitin average solution structure at pH 6.8, 150 mM NaCl
分子名称: Ubiquitin
著者Castaneda, C.A, Fushman, D.
登録日2013-08-03
公開日2013-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Unique structural, dynamical, and functional properties of k11-linked polyubiquitin chains.
Structure, 21, 2013
2CYU
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BU of 2cyu by Molmil
NMR structure of a downhill folding protein
分子名称: 2-OXOGLUTARATE DEHYDROGENASE MULTIENZYME COMPLEX
著者Munoz, V, Sadqi, M.
登録日2005-07-08
公開日2006-07-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Atom-by-atom analysis of global downhill protein folding.
Nature, 442, 2006
3M5D
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BU of 3m5d by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase K302R mutant complexed with PALAO
分子名称: N-acetylornithine carbamoyltransferase, N~2~-acetyl-N~5~-(phosphonoacetyl)-L-ornithine, SULFATE ION
著者Li, Y, Yu, X, Allewell, N.M, Tuchman, M, Shi, D.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Reversible post-translational carboxylation modulates the enzymatic activity of N-acetyl-L-ornithine transcarbamylase.
Biochemistry, 49, 2010
3M4N
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BU of 3m4n by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase K302A mutant complexed with PALAO
分子名称: N-acetylornithine carbamoyltransferase, N~2~-acetyl-N~5~-(phosphonoacetyl)-L-ornithine, SULFATE ION
著者Li, Y, Yu, X, Allewell, N.M, Tuchman, M, Shi, D.
登録日2010-03-11
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reversible post-translational carboxylation modulates the enzymatic activity of N-acetyl-L-ornithine transcarbamylase.
Biochemistry, 49, 2010
3M5C
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BU of 3m5c by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase K302E mutant complexed with PALAO
分子名称: N-acetylornithine carbamoyltransferase, N~2~-acetyl-N~5~-(phosphonoacetyl)-L-ornithine, SULFATE ION
著者Li, Y, Yu, X, Allewell, N.M, Tuchman, M, Shi, D.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Reversible post-translational carboxylation modulates the enzymatic activity of N-acetyl-L-ornithine transcarbamylase.
Biochemistry, 49, 2010
3M4J
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BU of 3m4j by Molmil
Crystal structure of N-acetyl-L-ornithine transcarbamylase complexed with PALAO
分子名称: N-acetylornithine carbamoyltransferase, N~2~-acetyl-N~5~-(phosphonoacetyl)-L-ornithine, SULFATE ION
著者Li, Y, Yu, X, Allewell, N.M, Tuchman, M, Shi, D.
登録日2010-03-11
公開日2010-07-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Reversible Post-Translational Carboxylation Modulates the Enzymatic Activity of N-Acetyl-l-ornithine Transcarbamylase.
Biochemistry, 49, 2010
7RBS
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BU of 7rbs by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with human ISG15
分子名称: Papain-like protease, Ubiquitin-like protein ISG15, ZINC ION
著者Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Wydorski, P, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-06
公開日2021-09-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
7S6P
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BU of 7s6p by Molmil
The crystal structure of human ISG15
分子名称: Ubiquitin-like protein ISG15
著者Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Wydorski, P, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-09-14
公開日2021-09-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
6SQO
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BU of 6sqo by Molmil
Crystal structure of human MDM2 RING domain homodimer bound to UbcH5B-Ub
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, NITRATE ION, ...
著者Magnussen, H.M, Ahmed, S.F, Huang, D.T.
登録日2019-09-04
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural basis for DNA damage-induced phosphoregulation of MDM2 RING domain.
Nat Commun, 11, 2020
6SQS
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BU of 6sqs by Molmil
Crystal structure of cat phospho-Ser429 MDM2 RING domain bound to UbcH5B-Ub
分子名称: E3 ubiquitin-protein ligase Mdm2, Ubiquitin-40S ribosomal protein S27a, Ubiquitin-conjugating enzyme E2 D2, ...
著者Magnussen, H.M, Ahmed, S.F, Huang, D.T.
登録日2019-09-04
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural basis for DNA damage-induced phosphoregulation of MDM2 RING domain.
Nat Commun, 11, 2020
6SQP
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BU of 6sqp by Molmil
Crystal structure of Cat MDM2-S429E RING domain homodimer
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, NITRATE ION, ...
著者Magnussen, H.M, Ahmed, S.F, Huang, D.T.
登録日2019-09-04
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Structural basis for DNA damage-induced phosphoregulation of MDM2 RING domain.
Nat Commun, 11, 2020
6SQR
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BU of 6sqr by Molmil
Crystal structure of Cat MDM2-S429E RING domain bound to UbcH5B-Ub
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase Mdm2, NITRATE ION, ...
著者Magnussen, H.M, Ahmed, S.F, Huang, D.T.
登録日2019-09-04
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural basis for DNA damage-induced phosphoregulation of MDM2 RING domain.
Nat Commun, 11, 2020
6V25
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BU of 6v25 by Molmil
Complex of mutant (K162M) of E. coli L-asparaginase II with L-Asp
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-11-22
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
6V24
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BU of 6v24 by Molmil
Complex of mutant (K162M) of E. coli L-asparaginase II with L-Asp. Covalent acyl-enzyme intermediate.
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-11-22
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020
6V2G
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BU of 6v2g by Molmil
Complex of mutant (K162M) of E. coli L-asparaginase II with L-Asp. Covalent acyl-enzyme intermediate and tetrahedral intermediate.
分子名称: L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-11-22
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Catalysis by l-Asparaginase.
Biochemistry, 59, 2020

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