Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3ULT
DownloadVisualize
BU of 3ult by Molmil
Crystal structure of an ice-binding protein from the perennial ryegrass, Lolium perenne
分子名称: 1,2-ETHANEDIOL, ETHANOL, Ice recrystallization inhibition protein-like protein
著者Middleton, A.J, Faucher, F, Campbell, R.L, Davies, P.L.
登録日2011-11-11
公開日2012-02-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Antifreeze protein from freeze-tolerant grass has a beta-roll fold with an irregularly structured ice-binding site.
J.Mol.Biol., 416, 2012
1MDW
DownloadVisualize
BU of 1mdw by Molmil
Crystal Structure of Calcium-Bound Protease Core of Calpain II Reveals the Basis for Intrinsic Inactivation
分子名称: CALCIUM ION, Calpain II, catalytic subunit
著者Moldoveanu, T, Hosfield, C.M, Lim, D, Jia, Z, Davies, P.L.
登録日2002-08-07
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Calpain silencing by a reversible intrinsic mechanism.
Nat.Struct.Biol., 10, 2003
1N4I
DownloadVisualize
BU of 1n4i by Molmil
Solution structure of spruce budworm antifreeze protein at 5 degrees celsius
分子名称: thermal hysteresis protein
著者Graether, S.P, Gagne, S.M, Spyracopoulos, L, Jia, Z, Davies, P.L, Sykes, B.D.
登録日2002-10-31
公開日2003-04-08
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Spruce Budworm Antifreeze Protein: Changes in Structure and Dynamics at Low Temperature
J.Mol.Biol., 327, 2003
3P4G
DownloadVisualize
BU of 3p4g by Molmil
X-ray crystal structure of a hyperactive, Ca2+-dependent, beta-helical antifreeze protein from an Antarctic bacterium
分子名称: ACETATE ION, Antifreeze protein, CALCIUM ION, ...
著者Garnham, C.P, Campbell, R.L, Davies, P.L.
登録日2010-10-06
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Anchored clathrate waters bind antifreeze proteins to ice.
Proc.Natl.Acad.Sci.USA, 108, 2011
3MSI
DownloadVisualize
BU of 3msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
分子名称: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
著者Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
登録日1997-09-17
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
7JJV
DownloadVisualize
BU of 7jjv by Molmil
Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice
分子名称: GrAFP antifreeze protein
著者Scholl, C.L, Tsuda, S, Graham, L.A, Davies, P.L.
登録日2020-07-27
公開日2021-01-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice.
Febs J., 288, 2021
5C7R
DownloadVisualize
BU of 5c7r by Molmil
Revealing surface waters on an antifreeze protein by fusion protein crystallography
分子名称: Fusion protein of Maltose-binding periplasmic protein and Type-3 ice-structuring protein HPLC 12, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Sun, T, Gauthier, S, Campbell, R.L, Davies, P.L.
登録日2015-06-24
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Revealing Surface Waters on an Antifreeze Protein by Fusion Protein Crystallography Combined with Molecular Dynamic Simulations.
J.Phys.Chem.B, 119, 2015
6M8M
DownloadVisualize
BU of 6m8m by Molmil
PA14 sugar-binding domain from RTX adhesin
分子名称: CALCIUM ION, Putative large adhesion protein (Lap) involved in biofilm formation, SODIUM ION, ...
著者Vance, T.D.R, Conroy, B, Davies, P.L.
登録日2018-08-22
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure and functional analysis of a bacterial adhesin sugar-binding domain.
Plos One, 14, 2019
4AME
DownloadVisualize
BU of 4ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 T18A
分子名称: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
著者Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
登録日1999-01-24
公開日1999-04-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6MSI
DownloadVisualize
BU of 6msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
分子名称: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
著者Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
登録日1997-09-17
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
7MSI
DownloadVisualize
BU of 7msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
分子名称: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12
著者Deluca, C.I, Davies, P.L, Ye, Q, Jia, Z.
登録日1997-09-17
公開日1998-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The effects of steric mutations on the structure of type III antifreeze protein and its interaction with ice.
J.Mol.Biol., 275, 1998
6X9M
DownloadVisualize
BU of 6x9m by Molmil
3-O-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 3-O-methyl-beta-D-glucopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7J
DownloadVisualize
BU of 6x7j by Molmil
fucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-05-30
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Y
DownloadVisualize
BU of 6x7y by Molmil
N-acetyl-glucosamine-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, S, Davies, P.L.
登録日2020-05-31
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X95
DownloadVisualize
BU of 6x95 by Molmil
2-deoxy-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-deoxy-alpha-D-arabino-hexopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-02
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8Y
DownloadVisualize
BU of 6x8y by Molmil
Ribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-06-02
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAC
DownloadVisualize
BU of 6xac by Molmil
Galactose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, beta-D-galactopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-04
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7T
DownloadVisualize
BU of 6x7t by Molmil
Allose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, alpha-D-allofuranose, ...
著者Guo, S, Davies, P.L.
登録日2020-05-30
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7X
DownloadVisualize
BU of 6x7x by Molmil
mannose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-05-31
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XAQ
DownloadVisualize
BU of 6xaq by Molmil
Alpha-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, methyl alpha-D-glucopyranoside
著者Guo, S, Davies, P.L.
登録日2020-06-04
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X7Z
DownloadVisualize
BU of 6x7z by Molmil
Inositol-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1,2-ETHANEDIOL, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X9P
DownloadVisualize
BU of 6x9p by Molmil
2-deoxyribose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, 2-deoxy-beta-D-ribopyranose, Antifreeze protein, ...
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8A
DownloadVisualize
BU of 6x8a by Molmil
Sucrose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6X8D
DownloadVisualize
BU of 6x8d by Molmil
Arabinose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: 1,2-ETHANEDIOL, Antifreeze protein, CALCIUM ION, ...
著者Guo, S, Davies, P.L.
登録日2020-06-01
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021
6XA5
DownloadVisualize
BU of 6xa5 by Molmil
Trehalose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-03
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon