Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4YBT
DownloadVisualize
BU of 4ybt by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{1,3-dimethyl-2-oxo-6-[3-(oxolan-3-ylmethoxy)phenoxy]-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-1-methyl-1H-imidazole-4-sulfonamide (7l)
分子名称: DIMETHYL SULFOXIDE, N-(1,3-dimethyl-2-oxo-6-{3-[(3S)-tetrahydrofuran-3-ylmethoxy]phenoxy}-2,3-dihydro-1H-benzimidazol-5-yl)-1-methyl-1H-imidazole-4-sulfonamide, Transcription intermediary factor 1-alpha, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-19
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
4YAX
DownloadVisualize
BU of 4yax by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl]benzenesulfonamide (5g)
分子名称: GLYCEROL, N-[6-(4-methoxyphenoxy)-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl]benzenesulfonamide, SULFATE ION, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-18
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
9FLF
DownloadVisualize
BU of 9flf by Molmil
Three-Dimensional Structure of Human Carbonic Anhydrase IX in Complex with a Covalent Inhibitor
分子名称: 3-[[(1~{R},4~{Z})-cyclododec-4-en-1-yl]amino]-4-ethylsulfonyl-2,5,6-tris(fluoranyl)benzenesulfonamide, Carbonic anhydrase, ZINC ION
著者Leitans, J, Tars, K.
登録日2024-06-05
公開日2024-12-18
最終更新日2025-01-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Targeted anticancer pre-vinylsulfone covalent inhibitors of carbonic anhydrase IX.
Elife, 13, 2024
4YAB
DownloadVisualize
BU of 4yab by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with 1-methyl-5-(2-methyl-1 3-thiazol-4-yl)-2 3-dihydro-1H-indol-2-one (1)
分子名称: 1-methyl-5-(2-methyl-1,3-thiazol-4-yl)-1,3-dihydro-2H-indol-2-one, SULFATE ION, Transcription intermediary factor 1-alpha, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-17
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
4YAD
DownloadVisualize
BU of 4yad by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with 2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,4-tetrahydroquinolin-6-yl)benzene-1-sulfonamide (3b)
分子名称: 2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,4-tetrahydroquinolin-6-yl)benzenesulfonamide, CHLORIDE ION, GLYCEROL, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-17
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
4YBM
DownloadVisualize
BU of 4ybm by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-3,4-dimethoxybenzene-1-sulfonamide (7b)
分子名称: GLYCEROL, N-{6-[3-(benzyloxy)phenoxy]-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}-3,4-dimethoxybenzenesulfonamide, SULFATE ION, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-18
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
4YBS
DownloadVisualize
BU of 4ybs by Molmil
Crystal structure of TRIM24 PHD-bromodomain complexed with N-{1,3-dimethyl-6-[3-(2-methylpropoxy)phenoxy]-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl}-1,2-dimethyl-1H-imidazole-4-sulfonamide (7g)
分子名称: DIMETHYL SULFOXIDE, N-{1,3-dimethyl-6-[3-(2-methylpropoxy)phenoxy]-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl}-1,2-dimethyl-1H-imidazole-4-sulfonamide, Transcription intermediary factor 1-alpha, ...
著者Poncet-Montange, G, Palmer, W, Jones, P.
登録日2015-02-19
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.
J.Med.Chem., 59, 2016
8CVT
DownloadVisualize
BU of 8cvt by Molmil
Human 19S-20S proteasome, state SD2
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
著者Zhao, J.
登録日2022-05-18
公開日2022-11-02
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CVS
DownloadVisualize
BU of 8cvs by Molmil
Human PA200-20S proteasome with MG-132
分子名称: INOSITOL HEXAKISPHOSPHATE, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome activator complex subunit 4, ...
著者Zhao, J.
登録日2022-05-18
公開日2022-11-02
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CVR
DownloadVisualize
BU of 8cvr by Molmil
Human 20S proteasome with MG-132
分子名称: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
著者Zhao, J.
登録日2022-05-18
公開日2022-11-02
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CXB
DownloadVisualize
BU of 8cxb by Molmil
Human PA28-20S (PA28-4a3b)
分子名称: Proteasome activator complex subunit 1, Proteasome activator complex subunit 2, Proteasome subunit alpha type-1, ...
著者Zhao, J, Makhija, S, Huang, B, Cheng, Y.
登録日2022-05-20
公開日2022-11-02
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
6I0C
DownloadVisualize
BU of 6i0c by Molmil
Human butyrylcholinesterase in complex with the R enantiomer of a chlorotacrine-tryptophan multi-target inhibitor.
分子名称: (2~{R})-2-azanyl-~{N}-[6-[(6-chloranyl-1,2,3,4-tetrahydroacridin-9-yl)amino]hexyl]-3-(1~{H}-indol-3-yl)propanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brazzolotto, X, Nachon, F.
登録日2018-10-25
公開日2019-03-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.675 Å)
主引用文献Novel tacrine-tryptophan hybrids: Multi-target directed ligands as potential treatment for Alzheimer's disease.
Eur.J.Med.Chem., 168, 2019
9G1Y
DownloadVisualize
BU of 9g1y by Molmil
Staphycoccus aureus MazF in complex with Nabobody 3
分子名称: Endoribonuclease MazF, Nanobody 3
著者Zorzini, V, Haesaerts, S, Loris, R.
登録日2024-07-10
公開日2024-07-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.69655347 Å)
主引用文献Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
9G4G
DownloadVisualize
BU of 9g4g by Molmil
Staphylococcus aureus MazF in complex with Nanobody 9
分子名称: Endoribonuclease MazF, Nanobody 9, SULFATE ION
著者Zorzini, V, Haesaerts, S, Loris, R.
登録日2024-07-15
公開日2024-07-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8957293 Å)
主引用文献Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
9G48
DownloadVisualize
BU of 9g48 by Molmil
Staphylococcus aureus MazF in complex with Nanobody 6
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, CADMIUM ION, Endoribonuclease MazF, ...
著者Zorzini, V, Haesaerts, S, Loris, R.
登録日2024-07-15
公開日2024-07-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.143536 Å)
主引用文献Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
9G7K
DownloadVisualize
BU of 9g7k by Molmil
Staphylococcus aureus MazF in complex with Nanobody 12
分子名称: CHLORIDE ION, Endoribonuclease MazF, Nanobody 12, ...
著者Zorzini, V, Haesaerts, S, Loris, R.
登録日2024-07-21
公開日2024-07-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.086874 Å)
主引用文献Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
1BW0
DownloadVisualize
BU of 1bw0 by Molmil
CRYSTAL STRUCTURE OF TYROSINE AMINOTRANSFERASE FROM TRYPANOSOMA CRUZI
分子名称: PROTEIN (TYROSINE AMINOTRANSFERASE)
著者Blankenfeldt, W, Montemartini, M, Hunter, G.R, Kalisz, H.M, Nowicki, C, Hecht, H.J.
登録日1998-09-28
公開日1999-09-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Trypanosoma cruzi tyrosine aminotransferase: substrate specificity is influenced by cofactor binding mode.
Protein Sci., 8, 1999
5NUU
DownloadVisualize
BU of 5nuu by Molmil
Torpedo californica acetylcholinesterase in complex with a chlorotacrine-tryptophan hybrid inhibitor
分子名称: (2~{S})-2-azanyl-~{N}-[6-[(6-chloranyl-1,2,3,4-tetrahydroacridin-9-yl)amino]hexyl]-3-(1~{H}-indol-3-yl)propanamide, Acetylcholinesterase, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Caliandro, R, Pesaresi, A, Lamba, D.
登録日2017-05-02
公開日2018-05-30
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Novel tacrine-tryptophan hybrids: Multi-target directed ligands as potential treatment for Alzheimer's disease.
Eur.J.Med.Chem., 168, 2019
9HI7
DownloadVisualize
BU of 9hi7 by Molmil
Structure of MC.7.G5 T cell receptor in complex with MR1 R9H
分子名称: Beta-2-microglobulin, Major histocompatibility complex class I-related gene protein, T cell receptor alpha chain MC.7.G5, ...
著者Karuppiah, V.
登録日2024-11-24
公開日2025-04-23
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Molecular basis underpinning MR1 allomorph recognition by an MR1-restricted T cell receptor.
Front Immunol, 16, 2025
8A64
DownloadVisualize
BU of 8a64 by Molmil
cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1.
分子名称: Endo-beta-N-acetylglucosaminidase F2, Immunoglobulin gamma-1 heavy chain, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Trastoy, B, Cifuente, J.O, Du, J.J, Sundberg, E.J, Guerin, M.E.
登録日2022-06-16
公開日2023-04-05
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Mechanism of antibody-specific deglycosylation and immune evasion by Streptococcal IgG-specific endoglycosidases.
Nat Commun, 14, 2023
8C4Z
DownloadVisualize
BU of 8c4z by Molmil
ProteinT protease, inactive mutant S224A
分子名称: CALCIUM ION, Extracellular serine proteinase, GLYCEROL, ...
著者Nomme, J, Gavalda, S, Cioci, G, Guicherd, M, Marty, A, Duquesne, S, Ben Khaled, M.
登録日2023-01-05
公開日2024-07-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献An engineered enzyme embedded into PLA to make self-biodegradable plastic.
Nature, 631, 2024
8C4X
DownloadVisualize
BU of 8c4x by Molmil
PAM Protease
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Nomme, J, Gavalda, S, Cioci, G, Guicherd, M, Marty, A, Duquesne, S, Ben Khaled, M.
登録日2023-01-05
公開日2024-07-17
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献An engineered enzyme embedded into PLA to make self-biodegradable plastic.
Nature, 631, 2024
1FO0
DownloadVisualize
BU of 1fo0 by Molmil
MURINE ALLOREACTIVE SCFV TCR-PEPTIDE-MHC CLASS I MOLECULE COMPLEX
分子名称: NATURALLY PROCESSED OCTAPEPTIDE PBM1, PROTEIN (ALLOGENEIC H-2KB MHC CLASS I MOLECULE), PROTEIN (BETA-2 MICROGLOBULIN), ...
著者Reiser, J.B, Darnault, C, Guimezanes, A, Gregoire, C, Mosser, T, Schmitt-Verhulst, A.-M, Fontecilla-Camps, J.C, Malissen, B, Housset, D, Mazza, G.
登録日2000-08-24
公開日2000-10-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a T cell receptor bound to an allogeneic MHC molecule.
Nat.Immunol., 1, 2000
5CS2
DownloadVisualize
BU of 5cs2 by Molmil
Crystal structure of Plasmodium falciparum diadenosine triphosphate hydrolase in complex with Cyclomarin A
分子名称: CHLORIDE ION, Cyclomarin A, Histidine triad protein
著者Ostermann, N, Schmitt, E, Gerhartz, B, Hinniger, A, Delmas, C.
登録日2015-07-23
公開日2015-10-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Gift from Nature: Cyclomarin A Kills Mycobacteria and Malaria Parasites by Distinct Modes of Action.
Chembiochem, 16, 2015
5E1E
DownloadVisualize
BU of 5e1e by Molmil
Human JAK1 kinase in complex with compound 30 at 2.30 Angstroms resolution
分子名称: 6-chloro-2-(2-fluoro-4,5-dimethoxyphenyl)-N-(piperidin-4-ylmethyl)-3H-imidazo[4,5-b]pyridin-7-amine, DI(HYDROXYETHYL)ETHER, Tyrosine-protein kinase JAK1
著者Ferguson, A.D.
登録日2015-09-29
公開日2015-11-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of azabenzimidazoles as potent JAK1 selective inhibitors.
Bioorg.Med.Chem.Lett., 26, 2016

235666

件を2025-05-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon