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8PEA
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BU of 8pea by Molmil
OXA-48_F72L. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: Beta-lactamase, CHLORIDE ION
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
6KDM
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BU of 6kdm by Molmil
HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:entecavir 5'-triphosphate ternary complex
分子名称: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2019-07-02
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine.
Sci Rep, 10, 2020
6KDN
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BU of 6kdn by Molmil
HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:dGTP ternary complex
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2019-07-02
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine.
Sci Rep, 10, 2020
3L6N
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BU of 3l6n by Molmil
Crystal structure of metallo-beta-lactamase IND-7
分子名称: SULFATE ION, ZINC ION, metallo-beta-lactamase
著者Yamaguchi, Y, Kurosaki, H, Yamagata, Y.
登録日2009-12-23
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of metallo-beta-lactamase IND-7 from a Chryseobacterium indologenes clinical isolate at 1.65-A resolution
J.Biochem., 147, 2010
1KLO
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BU of 1klo by Molmil
CRYSTAL STRUCTURE OF THREE CONSECUTIVE LAMININ-TYPE EPIDERMAL GROWTH FACTOR-LIKE (LE) MODULES OF LAMININ GAMMA1 CHAIN HARBORING THE NIDOGEN BINDING SITE
分子名称: LAMININ
著者Stetefeld, J, Mayer, U, Timpl, R, Huber, R.
登録日1996-02-02
公開日1997-08-20
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of three consecutive laminin-type epidermal growth factor-like (LE) modules of laminin gamma1 chain harboring the nidogen binding site.
J.Mol.Biol., 257, 1996
7C5W
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BU of 7c5w by Molmil
Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with iodide
分子名称: IODIDE ION, iota-carbonic anhydrase
著者Senda, M, Senda, T.
登録日2020-05-20
公開日2021-04-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
7C5Y
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BU of 7c5y by Molmil
Crystal structure of the iota-carbonic anhydrase from eukaryotic microalga complexed with iodide
分子名称: IODIDE ION, iota-carbonic anhydrase
著者Senda, M, Senda, T.
登録日2020-05-20
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
7C5X
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BU of 7c5x by Molmil
Crystal structure of the iota-carbonic anhydrase from eukaryotic microalga complexed with bicarbonate
分子名称: BICARBONATE ION, iota-carbonic anhydrase
著者Senda, M, Senda, T.
登録日2020-05-20
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
7C5V
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BU of 7c5v by Molmil
Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with bicarbonate
分子名称: BICARBONATE ION, iota-carbonic anhydrase
著者Senda, M, Senda, T.
登録日2020-05-20
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Characterization of a novel type of carbonic anhydrase that acts without metal cofactors.
Bmc Biol., 19, 2021
1X4S
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BU of 1x4s by Molmil
Solution structure of zinc finger HIT domain in protein FON
分子名称: ZINC ION, Zinc finger HIT domain containing protein 2
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-14
公開日2005-11-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the zinc finger HIT domain in protein FON
Protein Sci., 16, 2007
2ZIY
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BU of 2ziy by Molmil
Crystal structure of squid rhodopsin
分子名称: PALMITIC ACID, RETINAL, Rhodopsin
著者Miyano, M, Shimamura, T.
登録日2008-02-27
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region
J.Biol.Chem., 283, 2008
7U55
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BU of 7u55 by Molmil
Crystal structure of Thermoplasmatales archaeon heliorhodopsin at pH 4.5
分子名称: CHLORIDE ION, DODECANE, Heliorhodopsin, ...
著者Besaw, J.E, De Guzman, P, Miller, R.J.D, Ernst, O.P.
登録日2022-03-01
公開日2022-09-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Low pH structure of heliorhodopsin reveals chloride binding site and intramolecular signaling pathway.
Sci Rep, 12, 2022
8OXI
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BU of 8oxi by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. tritici AVRPM2(1)
分子名称: BgtE-5845_p
著者Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.J.
登録日2023-05-02
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OXH
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BU of 8oxh by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. hordei AVRA6
分子名称: AVRA6
著者Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.
登録日2023-05-02
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OXL
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BU of 8oxl by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. hordei AVRA7
分子名称: AVRA7
著者Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.J.
登録日2023-05-02
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OXK
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BU of 8oxk by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. hordei AVRA10
分子名称: CSEP0141 putative effector protein
著者Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.J.
登録日2023-05-02
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8OXJ
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BU of 8oxj by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. hordei AVRA22
分子名称: AVRA22
著者Cao, Y, Gebaure, J.M, Baumann, U, Chai, J.J.
登録日2023-05-02
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PEC
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BU of 8pec by Molmil
OXA-48_Q5-CAZ. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, Beta-lactamase, CHLORIDE ION
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8PEB
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BU of 8peb by Molmil
OXA-48_Q5. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
分子名称: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Leiros, H.-K.S, Frohlich, C.
登録日2023-06-13
公開日2024-02-14
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
7K41
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BU of 7k41 by Molmil
Bacterial O-GlcNAcase (OGA) with compound
分子名称: 1,2-ETHANEDIOL, 4-(4-methylpiperidin-1-yl)-N-(2-phenylethyl)pyrimidin-2-amine, ACETATE ION, ...
著者Lane, W, Tjhen, R, Snell, G, Sang, B.
登録日2020-09-14
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of a Novel and Brain-Penetrant O -GlcNAcase Inhibitor via Virtual Screening, Structure-Based Analysis, and Rational Lead Optimization.
J.Med.Chem., 64, 2021
8PHY
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BU of 8phy by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. tritici AVRPM2 (2)
分子名称: BgtE-5845_p
著者Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.J.
登録日2023-06-20
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
3AY4
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BU of 3ay4 by Molmil
Crystal structure of nonfucosylated Fc complexed with bis-glycosylated soluble form of Fc gamma receptor IIIa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, Low affinity immunoglobulin gamma Fc region receptor III-A, ...
著者Mizushima, T, Takemoto, E, Yagi, H, Shibata-Koyama, M, Isoda, Y, Iida, S, Satoh, M, Kato, K.
登録日2011-04-28
公開日2011-08-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for improved efficacy of therapeutic antibodies on defucosylation of their Fc glycans
Genes Cells, 16, 2011
6G5W
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BU of 6g5w by Molmil
Crystal Structure of KDM4A with compound YP-03-038
分子名称: (4~{R})-5-methyl-4-phenyl-2-pyridin-2-yl-pyrazolidin-3-one, 1,2-ETHANEDIOL, CITRIC ACID, ...
著者Malecki, P.H, Carter, D.M, Gohlke, U, Specker, E, Nazare, M, Weiss, M.S, Heinemann, U.
登録日2018-03-30
公開日2019-04-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Enhanced Properties of a Benzimidazole Benzylpyrazole Lysine Demethylase Inhibitor: Mechanism-of-Action, Binding Site Analysis, and Activity in Cellular Models of Prostate Cancer.
J.Med.Chem., 64, 2021
6G5X
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BU of 6g5x by Molmil
Crystal Structure of KDM4A with compound YP-02-145
分子名称: 1,2-ETHANEDIOL, 2-(3-methyl-5-oxidanylidene-4-phenyl-4~{H}-pyrazol-1-yl)-3~{H}-benzimidazole-5-carboxylic acid, CITRIC ACID, ...
著者Malecki, P.H, Carter, D.M, Gohlke, U, Specker, E, Nazare, M, Weiss, M.S, Heinemann, U.
登録日2018-03-30
公開日2019-04-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Enhanced Properties of a Benzimidazole Benzylpyrazole Lysine Demethylase Inhibitor: Mechanism-of-Action, Binding Site Analysis, and Activity in Cellular Models of Prostate Cancer.
J.Med.Chem., 64, 2021
3AQE
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BU of 3aqe by Molmil
Crystal structure of the extracellular domain of human RAMP2
分子名称: Receptor activity-modifying protein 2
著者Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Shindo, T, Yokoyama, S.
登録日2010-10-29
公開日2011-11-09
最終更新日2012-07-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for extracellular interactions between calcitonin receptor-like receptor and receptor activity-modifying protein 2 for adrenomedullin-specific binding
Protein Sci., 21, 2012

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