Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1KR4
DownloadVisualize
BU of 1kr4 by Molmil
Structure Genomics, Protein TM1056, cutA
Descriptor: Protein TM1056, cutA
Authors:Savchenko, A, Zhang, R, Joachimiak, A, Edwards, A, Akarina, T, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-01-08
Release date:2002-08-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray crystal structure of CutA from Thermotoga maritima at 1.4 A resolution.
Proteins, 54, 2004
1P9Q
DownloadVisualize
BU of 1p9q by Molmil
Structure of a hypothetical protein AF0491 from Archaeoglobus fulgidus
Descriptor: Hypothetical protein AF0491
Authors:Savchenko, A, Evdokimova, E, Skarina, T, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A.
Deposit date:2003-05-12
Release date:2004-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Shwachman-Bodian-Diamond syndrome protein family is involved in RNA metabolism.
J.Biol.Chem., 280, 2005
1QW2
DownloadVisualize
BU of 1qw2 by Molmil
Crystal Structure of a Protein of Unknown Function TA1206 from Thermoplasma acidophilum
Descriptor: conserved hypothetical protein TA1206
Authors:Savchenko, A, Evdokimova, E, Kudrytska, M, Edwards, A.E, Christendat, D, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-08-30
Release date:2004-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Hypothetical Protein "TA1206" from Thermoplasma acidophilum
To be Published
4W8K
DownloadVisualize
BU of 4w8k by Molmil
Crystal structure of a putative Cas1 enzyme from Vibrio phage ICP1
Descriptor: Cas1 protein, POTASSIUM ION
Authors:Stogios, P.J, Wawrzak, Z, Onopriyeno, O, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-25
Release date:2014-09-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:To be published
To Be Published
1K7K
DownloadVisualize
BU of 1k7k by Molmil
crystal structure of RdgB- inosine triphosphate pyrophosphatase from E. coli
Descriptor: Hypothetical protein yggV
Authors:Sanishvili, R, Joachimiak, A, Edwards, A, Savchenko, A, Skarina, T, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-19
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
2PYU
DownloadVisualize
BU of 2pyu by Molmil
Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with IMP
Descriptor: 1,2-ETHANEDIOL, INOSINIC ACID, Inosine Triphosphate Pyrophosphatase RdgB
Authors:Singer, A.U, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F.
Deposit date:2007-05-16
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
2Q16
DownloadVisualize
BU of 2q16 by Molmil
Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with ITP
Descriptor: CALCIUM ION, HAM1 protein homolog, INOSINE 5'-TRIPHOSPHATE, ...
Authors:Singer, A.U, Lam, R, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F.
Deposit date:2007-05-23
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
4W8I
DownloadVisualize
BU of 4w8i by Molmil
Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase
Descriptor: Probable sphingosine-1-phosphate lyase
Authors:Stogios, P.J, Daniels, C, Skarina, T, Cuff, M, Di Leo, R, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-24
Release date:2014-11-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy.
Proc.Natl.Acad.Sci.USA, 113, 2016
1ML8
DownloadVisualize
BU of 1ml8 by Molmil
structural genomics
Descriptor: hypothetical protein (crp region)
Authors:Korolev, S, Skarina, T, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-08-30
Release date:2003-04-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural genomics
To be Published
4W97
DownloadVisualize
BU of 4w97 by Molmil
Structure of ketosteroid transcriptional regulator KstR2 of Mycobacterium tuberculosis
Descriptor: CHLORIDE ION, HTH-type transcriptional repressor KstR2, S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] 3-[(3aS,4S,7aS)-7a-methyl-1,5-bis(oxidanylidene)-2,3,3a,4,6,7-hexahydroinden-4-yl]propanethioate
Authors:Stogios, P.J, Evdokimova, E, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-27
Release date:2014-11-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Functional Characterization of a Ketosteroid Transcriptional Regulator of Mycobacterium tuberculosis.
J.Biol.Chem., 290, 2015
5FBS
DownloadVisualize
BU of 5fbs by Molmil
Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with ADP and magnesium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoenolpyruvate synthase
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-14
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Rifampin phosphotransferase is an unusual antibiotic resistance kinase.
Nat Commun, 7, 2016
5FBU
DownloadVisualize
BU of 5fbu by Molmil
Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Phosphoenolpyruvate synthase, ...
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-14
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Rifampin phosphotransferase is an unusual antibiotic resistance kinase.
Nat Commun, 7, 2016
3U4G
DownloadVisualize
BU of 3u4g by Molmil
The Structure of CobT from Pyrococcus horikoshii
Descriptor: ACETIC ACID, NaMN:DMB phosphoribosyltransferase, SULFATE ION
Authors:Cuff, M.E, Evdokimova, E, Mursleen, A, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-10-07
Release date:2011-12-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of CobT from Pyrococcus horikoshii
TO BE PUBLISHED
3TJY
DownloadVisualize
BU of 3tjy by Molmil
Structure of the Pto-binding domain of HopPmaL generated by limited chymotrypsin digestion
Descriptor: CHLORIDE ION, Effector protein hopAB3, SULFATE ION
Authors:Singer, A.U, Stein, A, Xu, X, Cui, H, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-08-25
Release date:2011-09-14
Last modified:2013-01-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of HopPmaL reveals the presence of a second adaptor domain common to the HopAB family of Pseudomonas syringae type III effectors.
Biochemistry, 51, 2012
3BRM
DownloadVisualize
BU of 3brm by Molmil
Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine
Descriptor: 5-OXO-L-NORLEUCINE, Glutaminase 1
Authors:Singer, A.U, Kim, Y, Dementieva, I, Vinokour, E, Joachimiak, A, Savchenko, A, Yakunin, A.
Deposit date:2007-12-21
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
7UUK
DownloadVisualize
BU of 7uuk by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with tobramycin
Descriptor: Aminocyclitol acetyltransferase ApmA, CHLORIDE ION, TOBRAMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance.
Nat.Chem.Biol., 20, 2024
6DKH
DownloadVisualize
BU of 6dkh by Molmil
The crystal structure of L-idonate 5-dehydrogenase from Escherichia coli str. K-12 substr. MG1655
Descriptor: L-idonate 5-dehydrogenase (NAD(P)(+)), ZINC ION
Authors:Tan, K, Evdokimova, E, McChesney, C, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-29
Release date:2018-06-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:The crystal structure of L-idonate 5-dehydrogenase from Escherichia coli str. K-12 substr. MG1655
To Be Published
3TYR
DownloadVisualize
BU of 3tyr by Molmil
Crystal structure of transcriptional regulator VanUg, Form I
Descriptor: Transcriptional regulator
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Dong, A, Depardieu, F, Courvalin, P, Shabalin, I, Chruszcz, M, Minor, W, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-26
Release date:2011-10-12
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structure of transcriptional regulator VanUg, Form I
TO BE PUBLISHED
3BRC
DownloadVisualize
BU of 3brc by Molmil
Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum
Descriptor: Conserved protein of unknown function, PHOSPHATE ION
Authors:Zhang, R, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-21
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum.
To be Published
3C0U
DownloadVisualize
BU of 3c0u by Molmil
Crystal structure of E.coli yaeQ protein
Descriptor: CHLORIDE ION, SULFATE ION, Uncharacterized protein yaeQ
Authors:Chang, C, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-01-21
Release date:2008-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of E.coli yaeQ protein.
To be Published
3C6V
DownloadVisualize
BU of 3c6v by Molmil
Crystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatus
Descriptor: CHLORIDE ION, Probable tautomerase/dehalogenase AU4130, SODIUM ION, ...
Authors:Singer, A.U, Binkowski, T.A, Skarina, T, Kagan, O, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-05
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of AU4130/APC7354, a probable enzyme from the thermophilic fungus Aspergillus fumigatus.
To be Published
3C5O
DownloadVisualize
BU of 3c5o by Molmil
Crystal structure of the conserved protein of unknown function RPA1785 from Rhodopseudomonas palustris
Descriptor: GLYCEROL, UPF0311 protein RPA1785
Authors:Kim, Y, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-01
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of the Conserved Protein of Unknown Function RPA1785 from Rhodopseudomonas palustris.
To be Published
3C9H
DownloadVisualize
BU of 3c9h by Molmil
Crystal structure of the substrate binding protein of the ABC transporter from Agrobacterium tumefaciens
Descriptor: ABC transporter, substrate binding protein, CITRIC ACID, ...
Authors:Zhang, R, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-15
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of the substrate binding protein of the ABC transporter from Agrobacterium tumefaciens.
To be Published
3CBT
DownloadVisualize
BU of 3cbt by Molmil
Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor
Descriptor: MAGNESIUM ION, Phosphatase SC4828, SODIUM ION
Authors:Singer, A.U, Xu, X, Chang, C, Zheng, H, Edwards, A.M, Joachimiak, A, Yakunin, A.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-22
Release date:2008-03-25
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor.
To be Published
3CDD
DownloadVisualize
BU of 3cdd by Molmil
Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis
Descriptor: Prophage MuSo2, 43 kDa tail protein
Authors:Chang, C, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-26
Release date:2008-03-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis.
To be Published

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon