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8GK0
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BU of 8gk0 by Molmil
Multi-drug efflux pump RE-CmeB bound with Erythromycin
Descriptor: ERYTHROMYCIN A, Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2023-03-16
Release date:2023-06-07
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Cryo-Electron Microscopy Structures of a Campylobacter Multidrug Efflux Pump Reveal a Novel Mechanism of Drug Recognition and Resistance.
Microbiol Spectr, 11, 2023
8DHX
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BU of 8dhx by Molmil
Human liver ferritin
Descriptor: Ferritin heavy chain
Authors:Zhang, Z.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Human liver ferritin
To Be Published
5UAR
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BU of 5uar by Molmil
Dephosphorylated, ATP-free cystic fibrosis transmembrane conductance regulator (CFTR) from zebrafish
Descriptor: Cystic fibrosis transmembrane conductance regulator, DECANE
Authors:Zhang, Z, Chen, J.
Deposit date:2016-12-19
Release date:2017-01-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Atomic Structure of the Cystic Fibrosis Transmembrane Conductance Regulator.
Cell, 167, 2016
6WGN
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BU of 6wgn by Molmil
Crystal structure of K-Ras(G12D) GppNHp bound to cyclic peptide ligand KD2
Descriptor: Cyclic Peptide KD2, GTPase KRas, MAGNESIUM ION, ...
Authors:Zhang, Z, Gao, R, Hu, Q, Peacock, H, Peacock, D.M, Shokat, K.M, Suga, H.
Deposit date:2020-04-06
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:GTP-State-Selective Cyclic Peptide Ligands of K-Ras(G12D) Block Its Interaction with Raf.
Acs Cent.Sci., 6, 2020
8DMP
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BU of 8dmp by Molmil
Crystal structure of Legionella pneumophila macrodomain effector MavL
Descriptor: MavL
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of Legionella pneumophila macrodomain effector MavL
To Be Published
8DMU
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BU of 8dmu by Molmil
Crystal structure of macrodomain CG3568 from Drosophila melanogaster in complex with ADP-ribose
Descriptor: CG3568, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of ADP-ribose-bound Drosophila macrodomain CG3568
To Be Published
8DMS
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BU of 8dms by Molmil
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose
Descriptor: CITRATE ANION, METHYL 4-AMINOBUTANOATE, MavL, ...
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose
To Be Published
8DMR
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BU of 8dmr by Molmil
Legionella macrodomain effector MavL R370A in complex with ADP-ribose
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MavL, ...
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of ADP-ribose-bound Legionella pneumophila macrodomain effector MavL R370A
To Be Published
8DMQ
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BU of 8dmq by Molmil
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, METHYL 4-AMINOBUTANOATE, ...
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Structure of Legionella pneumophila macrodomain effector MavL in complex with ubiquitin vinyl methyl ester
To Be Published
8DMT
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BU of 8dmt by Molmil
Crystal structure of macrodomain CG2909 from Drosophila melanogaster in complex with ADP-ribose
Descriptor: RE54994p, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of ADP-ribose-bound Drosophila macrodomain CG2909
To Be Published
8F3E
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BU of 8f3e by Molmil
Trimer of aminoglycoside efflux pump AcrD
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-10
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023
8F4R
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BU of 8f4r by Molmil
Gentamicin bound aminoglycoside efflux pump AcrD
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023
8F56
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BU of 8f56 by Molmil
Dimer of aminoglycoside efflux pump AcrD treated with gentamicin
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023
8F4N
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BU of 8f4n by Molmil
Dimer of aminoglycoside efflux pump AcrD
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023
6MSM
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BU of 6msm by Molmil
Phosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-TRIPHOSPHATE, CHOLESTEROL, ...
Authors:Zhang, Z, Liu, F, Chen, J.
Deposit date:2018-10-16
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular structure of the ATP-bound, phosphorylated human CFTR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7E3J
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BU of 7e3j by Molmil
Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE2, Spike protein S1, ...
Authors:Zhang, Z, Zhang, Y.
Deposit date:2021-02-08
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The molecular basis for SARS-CoV-2 binding to dog ACE2.
Nat Commun, 12, 2021
5GMF
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BU of 5gmf by Molmil
Crystal structure of monkey TLR7 in complex with guanosine and polyU
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2016-07-14
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA
Immunity, 45, 2016
5GMG
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BU of 5gmg by Molmil
Crystal structure of monkey TLR7 in complex with loxoribine and polyU
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-7-prop-2-enyl-1~{H}-purine-6,8-dione, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2016-07-14
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA
Immunity, 45, 2016
5GMH
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BU of 5gmh by Molmil
Crystal structure of monkey TLR7 in complex with R848
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2016-07-14
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA
Immunity, 45, 2016
8HD0
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BU of 8hd0 by Molmil
Cell divisome sPG hydrolysis machinery FtsEX-EnvC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, Cell division protein FtsX, ...
Authors:Zhang, Z, Chen, Y.
Deposit date:2022-11-03
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural insight into the septal peptidoglycan hydrolysis machinery of bacterial cell division
To Be Published
3RHE
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BU of 3rhe by Molmil
The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
Descriptor: NAD-dependent benzaldehyde dehydrogenase
Authors:Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:The crystal structure of NAD-dependent benzaldehyde dehydrogenase from Legionella pneumophila
To be Published
3R03
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BU of 3r03 by Molmil
The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NUDIX hydrolase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-07
Release date:2011-05-11
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.491 Å)
Cite:The crystal structure of NUDIX hydrolase from Rhodospirillum rubrum
To be Published
3RHA
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BU of 3rha by Molmil
The crystal structure of Oxidoreductase from Arthrobacter aurescens
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLYCEROL, Putrescine oxidase
Authors:Zhang, Z, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:The crystal structure of Oxidoreductase from Arthrobacter aurescens
To be Published
3U9L
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BU of 3u9l by Molmil
The crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) from Sinorhizobium meliloti
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-10-19
Release date:2011-11-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) from Sinorhizobium meliloti
TO BE PUBLISHED
3SSZ
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BU of 3ssz by Molmil
The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium
Descriptor: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein, SULFATE ION
Authors:Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-08
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium
To be Published

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PDB entries from 2024-07-17

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