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2EU8
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BU of 2eu8 by Molmil
Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R)
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Chen, S, Shamoo, Y.
Deposit date:2005-10-28
Release date:2006-06-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In vivo molecular evolution reveals biophysical origins of organismal fitness.
Mol.Cell, 22, 2006
6K1N
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BU of 6k1n by Molmil
PLP-bound form of a putative cystathionine gamma-lyase
Descriptor: Cystathionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, S, Wang, Y.
Deposit date:2019-05-10
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural characterization of cystathionine gamma-lyase smCSE enables aqueous metal quantum dot biosynthesis.
Int.J.Biol.Macromol., 174, 2021
2JP5
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BU of 2jp5 by Molmil
ATWLPPR an anti-angiogenic peptide
Descriptor: ATWLPPR peptide
Authors:Badache, S, Bouchemal, N.C, Herve du Penhoat, C.L.M.
Deposit date:2007-04-20
Release date:2008-03-04
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structure-function analysis of the antiangiogenic ATWLPPR peptide inhibiting VEGF(165) binding to neuropilin-1 and molecular dynamics simulations of the ATWLPPR/neuropilin-1 complex
Peptides, 28, 2007
5IWG
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BU of 5iwg by Molmil
HDAC2 WITH LIGAND BRD4884
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Steinbacher, S.
Deposit date:2016-03-22
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Kinetic and structural insights into the binding of histone deacetylase 1 and 2 (HDAC1, 2) inhibitors.
Bioorg.Med.Chem., 24, 2016
5IX0
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BU of 5ix0 by Molmil
HDAC2 WITH LIGAND BRD7232
Descriptor: (3-exo)-N-(4-amino-4'-fluoro[1,1'-biphenyl]-3-yl)-8-oxabicyclo[3.2.1]octane-3-carboxamide, 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, ...
Authors:Steinbacher, S.
Deposit date:2016-03-23
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Kinetic and structural insights into the binding of histone deacetylase 1 and 2 (HDAC1, 2) inhibitors.
Bioorg.Med.Chem., 24, 2016
3SFZ
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BU of 3sfz by Molmil
Crystal structure of full-length murine Apaf-1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Apoptotic peptidase activating factor 1, GAMMA-BUTYROLACTONE
Authors:Eschenburg, S, Reubold, T.F.
Deposit date:2011-06-14
Release date:2011-08-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of full-length Apaf-1: how the death signal is relayed in the mitochondrial pathway of apoptosis.
Structure, 19, 2011
3SHF
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BU of 3shf by Molmil
Crystal structure of the R265S mutant of full-length murine Apaf-1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Apoptotic peptidase activating factor 1, GAMMA-BUTYROLACTONE
Authors:Eschenburg, S, Reubold, T.F.
Deposit date:2011-06-16
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Crystal structure of full-length Apaf-1: how the death signal is relayed in the mitochondrial pathway of apoptosis.
Structure, 19, 2011
3BMX
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BU of 3bmx by Molmil
Beta-N-hexosaminidase (YbbD) from Bacillus subtilis
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, ACETATE ION, SODIUM ION, ...
Authors:Fischer, S.
Deposit date:2007-12-13
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and kinetic analysis of Bacillus subtilis N-acetylglucosaminidase reveals a unique Asp-His dyad mechanism
J.Biol.Chem., 285, 2010
2VPL
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BU of 2vpl by Molmil
The structure of the complex between the first domain of L1 protein from Thermus thermophilus and mRNA from Methanococcus jannaschii
Descriptor: 50S RIBOSOMAL PROTEIN L1, FRAGMENT OF MRNA FOR L1-OPERON CONTAINING REGULATOR L1-BINDING SITE, POTASSIUM ION
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Garber, M.
Deposit date:2008-03-01
Release date:2008-09-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Domain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA.
J. Mol. Biol., 383, 2008
2MOA
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BU of 2moa by Molmil
Solution NMR structure of peptide ImI1 (peak 2)
Descriptor: Alpha-conotoxin ImI
Authors:Heinis, C, Chen, S.
Deposit date:2014-04-24
Release date:2014-09-24
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Dithiol amino acids can structurally shape and enhance the ligand-binding properties of polypeptides.
Nat Chem, 6, 2014
1HQ7
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BU of 1hq7 by Molmil
CRYSTALLOGRAPHIC STUDIES OF A DODECAMER B-DNA D-(GCAAACGTTTGC)2
Descriptor: 5'-D(*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*C)-3'
Authors:Chen, S, Berman, H.M.
Deposit date:2000-12-14
Release date:2003-07-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Signatures of protein-DNA recognition in free DNA binding sites.
J.Mol.Biol., 386, 2009
3CPH
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BU of 3cph by Molmil
Crystal structure of Sec4 in complex with Rab-GDI
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rab GDP-dissociation inhibitor, ...
Authors:Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
Deposit date:2008-03-31
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
3CPJ
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BU of 3cpj by Molmil
Crystal structure of Ypt31 in complex with yeast Rab-GDI
Descriptor: CHLORIDE ION, GTP-binding protein YPT31/YPT8, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kravchenko, S, Ignatev, A, Goody, R.S, Rak, A, Pylypenko, O.
Deposit date:2008-03-31
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A structural model of the GDP dissociation inhibitor rab membrane extraction mechanism.
J.Biol.Chem., 283, 2008
2OV7
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BU of 2ov7 by Molmil
The first domain of the ribosomal protein L1 from Thermus thermophilus
Descriptor: 50S ribosomal protein L1
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Davydova, N, Garber, M.
Deposit date:2007-02-13
Release date:2007-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
2OUM
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BU of 2oum by Molmil
The first domain of L1 from Thermus thermophilus
Descriptor: 50S ribosomal protein L1
Authors:Kljashtorny, V, Tishchenko, S, Nevskaya, N, Nikonov, S, Davydova, N, Garber, M.
Deposit date:2007-02-12
Release date:2008-02-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Domain I of ribosomal protein L1 is sufficient for specific RNA binding.
Nucleic Acids Res., 35, 2007
1CLW
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BU of 1clw by Molmil
TAILSPIKE PROTEIN FROM PHAGE P22, V331A MUTANT
Descriptor: TAILSPIKE PROTEIN
Authors:Steinbacher, S, Baxa, U, Weintraub, A, Huber, R, Seckler, R.
Deposit date:1999-05-04
Release date:1999-11-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutations improving the folding of phage P22 tailspike protein affect its receptor binding activity.
J.Mol.Biol., 293, 1999
7LT3
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BU of 7lt3 by Molmil
NHEJ Long-range synaptic complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (30-MER), DNA (31-MER), ...
Authors:He, Y, Chen, S.
Deposit date:2021-02-18
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of long-range to short-range synaptic transition in NHEJ.
Nature, 593, 2021
2OAR
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BU of 2oar by Molmil
Mechanosensitive Channel of Large Conductance (MscL)
Descriptor: GOLD ION, Large-conductance mechanosensitive channel
Authors:Rees, D.C, Chang, G, Spencer, R.H, Lee, A.T, Steinbacher, S, Strop, P.
Deposit date:2006-12-17
Release date:2007-01-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of the Prokaryotic Mechanosensitive Channels MscL and MscS
Current Topics in Membranes, 58, 2007
2OAU
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BU of 2oau by Molmil
Mechanosensitive Channel of Small Conductance (MscS)
Descriptor: Small-conductance mechanosensitive channel
Authors:Rees, D.C, Bass, R.B, Steinbacher, S, Strop, P, Barclay, M.T.
Deposit date:2006-12-17
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structures of the Prokaryotic Mechanosensitive Channels MscL and MscS
CURRENT TOPICS IN MEMBRANES, 58, 2007
7CR5
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BU of 7cr5 by Molmil
Complex structure of a human monoclonal antibody with SARS-CoV-2 nucleocapsid protein NTD
Descriptor: Nucleoprotein, ZINC ION, monoclonal antibody chain H, ...
Authors:Chen, S, Kang, S.
Deposit date:2020-08-12
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:A SARS-CoV-2 antibody curbs viral nucleocapsid protein-induced complement hyperactivation.
Nat Commun, 12, 2021
7DE1
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BU of 7de1 by Molmil
Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal RNA binding domain
Descriptor: DI(HYDROXYETHYL)ETHER, Nucleoprotein
Authors:Chen, S, Kang, S.
Deposit date:2020-11-01
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insight Into the SARS-CoV-2 Nucleocapsid Protein C-Terminal Domain Reveals a Novel Recognition Mechanism for Viral Transcriptional Regulatory Sequences.
Front Chem, 8, 2020
7F5F
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BU of 7f5f by Molmil
SARS-CoV-2 ORF8 S84
Descriptor: CALCIUM ION, ORF8 protein
Authors:Chen, S, Zhou, Z, Chen, X.
Deposit date:2021-06-22
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal Structures of Bat and Human Coronavirus ORF8 Protein Ig-Like Domain Provide Insights Into the Diversity of Immune Responses.
Front Immunol, 12, 2021
7EDP
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BU of 7edp by Molmil
Crystal structure of AF10-DOT1L complex
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-79 specific, Protein AF-10
Authors:Chen, S, Zhou, Z.
Deposit date:2021-03-16
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characteristics of coiled-coil regions in AF10-DOT1L and AF10-inhibitory peptide complex.
J Leukoc Biol, 110, 2021
7EKN
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BU of 7ekn by Molmil
Crystal structure of AF10-ipep complex
Descriptor: Protein AF-10, ipep
Authors:Chen, S, Zhou, Z.
Deposit date:2021-04-05
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural characteristics of coiled-coil regions in AF10-DOT1L and AF10-inhibitory peptide complex.
J Leukoc Biol, 110, 2021
7BVD
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BU of 7bvd by Molmil
Anthranilate synthase component I (TrpE)[Mycolicibacterium smegmatis]
Descriptor: Anthranilate synthase component 1, BENZOIC ACID, GLYCEROL, ...
Authors:Chen, Y, Che, S, Zhang, Q, Bartlam, M.
Deposit date:2020-04-10
Release date:2020-05-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of subunit I of the anthranilate synthase complex of Mycolicibacterium smegmatis
Biochem.Biophys.Res.Commun., 527, 2020

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