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5H3M
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BU of 5h3m by Molmil
Solution structure of human Gelsolin protein domain 1 at pH 5.0
Descriptor: Gelsolin
Authors:Fan, J.S, Yang, D.
Deposit date:2016-10-26
Release date:2017-11-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for pH-mediated Regulation of F-actin Severing by Gelsolin Domain 1.
Sci Rep, 7, 2017
6LAG
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BU of 6lag by Molmil
Solution structure of SPA-2 SHD
Descriptor: Spa2-like protein
Authors:Fan, J.S, Wong, J.Y, Zheng, P, Yang, D, Jedd, G.
Deposit date:2019-11-12
Release date:2020-04-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Spitzenkorper assembly mechanisms reveal conserved features of fungal and metazoan polarity scaffolds.
Nat Commun, 11, 2020
6L7K
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BU of 6l7k by Molmil
solution structure of hIFABP V60C/Y70C variant.
Descriptor: Fatty acid-binding protein, intestinal
Authors:Fan, J, Yang, D.
Deposit date:2019-11-01
Release date:2020-11-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ligand Entry into Fatty Acid Binding Protein via Local Unfolding Instead of Gap Widening.
Biophys.J., 118, 2020
2K3N
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BU of 2k3n by Molmil
Solution structure of the type 1 repetitive domain (TUSP1-RP1) of the egg case silk from Nephila Antipodiana
Descriptor: TuSp1
Authors:Lin, Z, Huang, W, Fan, J, Yang, D.
Deposit date:2008-05-14
Release date:2009-06-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
2K3O
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BU of 2k3o by Molmil
Solution structure of the type 2 repetitive domain (TUSP1-RP2) of the egg case silk from Nephila Antipodiana
Descriptor: TuSp1
Authors:Lin, Z, Huang, W, Fan, J, Yang, D.
Deposit date:2008-05-14
Release date:2009-06-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
2KAP
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BU of 2kap by Molmil
Solution structure of DLC1-SAM
Descriptor: Rho GTPase-activating protein 7
Authors:Yang, S, Yang, D.
Deposit date:2008-11-12
Release date:2009-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Characterization of DLC1-SAM equilibrium unfolding at the amino acid residue level
Biochemistry, 48, 2009
6NBI
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BU of 6nbi by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6NBH
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BU of 6nbh by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6NEB
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BU of 6neb by Molmil
MYC Promoter G-Quadruplex with 1:6:1 loop length
Descriptor: DNA (27-MER)
Authors:Dickerhoff, J, Onel, B, Chen, L, Chen, Y, Yang, D.
Deposit date:2018-12-17
Release date:2019-02-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of a MYC Promoter G-Quadruplex with 1:6:1 Loop Length.
Acs Omega, 4, 2019
6NBF
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BU of 6nbf by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6O2L
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BU of 6o2l by Molmil
NMR structure of the 2:1 complex of a carbazole derivative BMVC bound to c-MYC G-quadruplex
Descriptor: 3,6-bis[(E)-2-(1-methylpyridin-1-ium-4-yl)ethenyl]-9H-carbazole, DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3')
Authors:Lin, C, Liu, W, Yang, D.
Deposit date:2019-02-24
Release date:2019-10-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures of 1:1 and 2:1 complexes of BMVC and MYC promoter G-quadruplex reveal a mechanism of ligand conformation adjustment for G4-recognition.
Nucleic Acids Res., 47, 2019
3WXZ
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BU of 3wxz by Molmil
The structure of the I375F mutant of CsyB
Descriptor: Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WY0
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BU of 3wy0 by Molmil
The I375W mutant of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WXY
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BU of 3wxy by Molmil
Crystal structure of CsyB complexed with CoA-SH
Descriptor: COENZYME A, Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
1XJI
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BU of 1xji by Molmil
Bacteriorhodopsin crystallized in bicelles at room temperature
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Bacteriorhodopsin, DECANE, ...
Authors:Faham, S, Boulting, G.L, Massey, E.A, Yohannan, S, Yang, D, Bowie, J.U.
Deposit date:2004-09-23
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallization of bacteriorhodopsin from bicelle formulations at room temperature
Protein Sci., 14, 2005
8X2K
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BU of 8x2k by Molmil
a lipid receptor complex structure
Descriptor: (Z)-N-(2-hydroxyethyl)octadec-9-enamide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Geng, C, Yang, D, Jun, X.
Deposit date:2023-11-09
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:a lipid receptor complex structure
To Be Published
5XXA
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BU of 5xxa by Molmil
beta-1,4-mannanase-SeMet-RmMan134A
Descriptor: endo-1,4-beta-mannanase
Authors:Jiang, Z.Q, You, X, Yang, D, Huang, P.
Deposit date:2017-07-03
Release date:2018-07-25
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of endo-1,4-beta-mannanase at 1.76 Angstroms resolution.
To Be Published
2ML7
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BU of 2ml7 by Molmil
Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
Descriptor: Specific abundant protein 3
Authors:Wang, S, Nguyen, K, Luo, S, Tam, J, Yang, D.
Deposit date:2014-02-20
Release date:2015-03-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
To be Published
2LYI
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BU of 2lyi by Molmil
Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana
Descriptor: PROTEIN (entity)
Authors:Wang, S, Huang, W, Yang, D.
Deposit date:2012-09-18
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana
J.Biomol.Nmr, 54, 2012
2MAB
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BU of 2mab by Molmil
Untangling the Solution Structure of C-Terminal Domain of Aciniform Spidroin
Descriptor: ACINIFORM SPIDROIN
Authors:Wang, S, Yang, D.
Deposit date:2013-07-09
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and function of C-terminal domain of aciniform spidroin
Biomacromolecules, 15, 2014
5WVP
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BU of 5wvp by Molmil
Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii
Descriptor: Beta-glucosidase, beta-D-mannopyranose
Authors:Jiang, Z, Wu, S, Yang, D, Qin, Z, You, X, Huang, P.
Deposit date:2016-12-28
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii
To Be Published
4L6R
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BU of 4l6r by Molmil
Structure of the class B human glucagon G protein coupled receptor
Descriptor: DI(HYDROXYETHYL)ETHER, Soluble cytochrome b562 and Glucagon receptor chimera
Authors:Siu, F.Y, He, M, de Graaf, C, Han, G.W, Yang, D, Zhang, Z, Zhou, C, Xu, Q, Wacker, D, Joseph, J.S, Liu, W, Lau, J, Cherezov, V, Katritch, V, Wang, M.W, Stevens, R.C, GPCR Network (GPCR)
Deposit date:2013-06-12
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the human glucagon class B G-protein-coupled receptor.
Nature, 499, 2013
5UKH
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BU of 5ukh by Molmil
Structure of TelC from Streptococcus intermedius B196
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:Whitney, J.C, Ching, M.Q, Bryant, D, Mougous, J.D.
Deposit date:2017-01-22
Release date:2017-07-26
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A broadly distributed toxin family mediates contact-dependent antagonism between gram-positive bacteria.
Elife, 6, 2017
2M6Z
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BU of 2m6z by Molmil
Refined solution structure of Human Adult Hemoglobin in the Carbonmonoxy Form
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fan, J.S, Yang, D, Choy, W.Y.
Deposit date:2013-04-15
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure and dynamics of human hemoglobin in the carbonmonoxy form
Biochemistry, 52, 2013
2M27
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BU of 2m27 by Molmil
Major G-quadruplex structure formed in human VEGF promoter, a monomeric parallel-stranded quadruplex
Descriptor: DNA_(5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')_
Authors:Agrawal, P, Hatzakis, E, Guo, K, Carver, M, Yang, D.
Deposit date:2012-12-14
Release date:2013-09-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the major G-quadruplex formed in the human VEGF promoter in K+: insights into loop interactions of the parallel G-quadruplexes.
Nucleic Acids Res., 41, 2013

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