Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3SOY
DownloadVisualize
BU of 3soy by Molmil
Nuclear transport factor 2 (NTF2-like) superfamily protein from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Descriptor: GLYCEROL, IMIDAZOLE, MALONATE ION, ...
Authors:Cuff, M.E, Li, H, Jedrzejczak, R, Brown, R.N, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
Deposit date:2011-06-30
Release date:2011-08-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nuclear transport factor 2 (NTF2-like) superfamily protein from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
TO BE PUBLISHED
5F1P
DownloadVisualize
BU of 5f1p by Molmil
Crystal Structure of Dehydrogenase from Streptomyces platensis
Descriptor: PtmO8
Authors:Kim, Y, Li, H, Endres, M, Babnigg, G, Rudolf, J, Ma, M, Chang, C.-Y, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-11-30
Release date:2015-12-30
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Crystal Structure of a Dehydrogenase, PtmO8, from Streptomyces platensis
To Be Published
8V2F
DownloadVisualize
BU of 8v2f by Molmil
Crystal structure of IRAK4 kinase domain with compound 9
Descriptor: CHLORIDE ION, GLYCEROL, Interleukin-1 receptor-associated kinase 4, ...
Authors:Weiss, M.M, Zheng, X, Browne, C.M, Campbell, V, Chen, D, Enerson, B, Fei, X, Huang, X, Klaus, C.R, Li, H, Mayo, M, McDonald, A.A, Paul, A, Sharma, K, Shi, Y, Slavin, A, Walter, D.M, Yuan, K, Zhang, Y, Zhu, X, Kelleher, J, Ji, N, Walker, D, Mainolfi, N.
Deposit date:2023-11-22
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Discovery of KT-413, a Targeted Protein Degrader of IRAK4 and IMiD Substrates Targeting MYD88 Mutant Diffuse Large B-Cell Lymphoma.
J.Med.Chem., 67, 2024
8V1O
DownloadVisualize
BU of 8v1o by Molmil
Crystal structure of IRAK4 kinase domain with compound 4
Descriptor: CHLORIDE ION, GLYCEROL, Interleukin-1 receptor-associated kinase 4, ...
Authors:Weiss, M.M, Zheng, X, Browne, C.M, Campbell, V, Chen, D, Enerson, B, Fei, X, Huang, X, Klaus, C.R, Li, H, Mayo, M, McDonald, A.A, Paul, A, Sharma, K, Shi, Y, Slavin, A, Walter, D.M, Yuan, K, Zhang, Y, Zhu, X, Kelleher, J, Ji, N, Walker, D, Mainolfi, N.
Deposit date:2023-11-21
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Discovery of KT-413, a Targeted Protein Degrader of IRAK4 and IMiD Substrates Targeting MYD88 Mutant Diffuse Large B-Cell Lymphoma.
J.Med.Chem., 67, 2024
8V2L
DownloadVisualize
BU of 8v2l by Molmil
Crystal structure of IRAK4 kinase domain with compound 8
Descriptor: 1,2-ETHANEDIOL, Interleukin-1 receptor-associated kinase 4, N-{2-[4-(hydroxymethyl)phenyl]-6-(2-hydroxypropan-2-yl)-2H-indazol-5-yl}-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Weiss, M.M, Zheng, X, Browne, C.M, Campbell, V, Chen, D, Enerson, B, Fei, X, Huang, X, Klaus, C.R, Li, H, Mayo, M, McDonald, A.A, Paul, A, Sharma, K, Shi, Y, Slavin, A, Walter, D.M, Yuan, K, Zhang, Y, Zhu, X, Kelleher, J, Ji, N, Walker, D, Mainolfi, N.
Deposit date:2023-11-22
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of KT-413, a Targeted Protein Degrader of IRAK4 and IMiD Substrates Targeting MYD88 Mutant Diffuse Large B-Cell Lymphoma.
J.Med.Chem., 67, 2024
4NQR
DownloadVisualize
BU of 4nqr by Molmil
The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with alanine
Descriptor: ALANINE, Amino acid/amide ABC transporter substrate-binding protein, HAAT family, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-11-25
Release date:2013-12-18
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with alanine.
To be Published
4NTR
DownloadVisualize
BU of 4ntr by Molmil
Crystal structure of macrocycles containing Abeta 17-23 (LVFFAED) and Abeta 30-36 (AII(SAR)L(ORN)V)
Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVFFAED(ORN)AII(SAR)L(ORN)V, SODIUM ION
Authors:Spencer, R.K, Li, H, Nowick, J.S.
Deposit date:2013-12-02
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36).
J.Am.Chem.Soc., 136, 2014
4OAT
DownloadVisualize
BU of 4oat by Molmil
The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with isoleucine.
Descriptor: Amino acid/amide ABC transporter substrate-binding protein, HAAT family, CHLORIDE ION, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-01-06
Release date:2014-01-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with isoleucine.
To be Published
4OBB
DownloadVisualize
BU of 4obb by Molmil
The crystal structure of a solute-binding protein from Anabaena variabilis ATCC 29413 in complex with (3S)-3-methyl-2-oxopentanoic acid.
Descriptor: (3S)-3-methyl-2-oxopentanoic acid, Amino acid/amide ABC transporter substrate-binding protein, HAAT family, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-01-07
Release date:2014-03-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.526 Å)
Cite:The crystal structure of a solute-binding protein from Anabaena variabilis ATCC 29413 in complex with (3S)-3-methyl-2-oxopentanoic acid.
To be Published
4NTP
DownloadVisualize
BU of 4ntp by Molmil
Crystal structure of macrocycles containing A 17-23 (LV(PHI)FAED) and A 30-36 (AII(SAR)L(ORN)V)
Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LV(PHI)FAED(ORN)AII(SAR)L(ORN)V, SODIUM ION
Authors:Nowick, J.S, Spencer, R.K, Li, H.
Deposit date:2013-12-02
Release date:2014-04-02
Last modified:2020-10-21
Method:X-RAY DIFFRACTION (1.987 Å)
Cite:X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36).
J.Am.Chem.Soc., 136, 2014
4MZF
DownloadVisualize
BU of 4mzf by Molmil
Crystal structure of human Spindlin1 bound to histone H3(K4me3-R8me2a) peptide
Descriptor: CHLORIDE ION, MAGNESIUM ION, Peptide from Histone H3.2, ...
Authors:Su, X, Ding, X, Li, H.
Deposit date:2013-09-30
Release date:2014-03-26
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Molecular basis underlying histone H3 lysine-arginine methylation pattern readout by Spin/Ssty repeats of Spindlin1
Genes Dev., 28, 2014
4N03
DownloadVisualize
BU of 4n03 by Molmil
Fatty acid ABC transporter substrate-binding protein from Thermomonospora curvata
Descriptor: 1,2-ETHANEDIOL, ABC-type branched-chain amino acid transport systems periplasmic component-like protein, PALMITIC ACID
Authors:Osipiuk, J, Li, H, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-30
Release date:2013-10-16
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Fatty acid ABC transporter substrate-binding protein from Thermomonospora curvata
To be Published
4MOZ
DownloadVisualize
BU of 4moz by Molmil
Fructose-bisphosphate aldolase from Slackia heliotrinireducens DSM 20476
Descriptor: Fructose-bisphosphate aldolase
Authors:Chang, C, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-12
Release date:2013-09-25
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Fructose-bisphosphate aldolase from Slackia heliotrinireducens DSM 20476
To be Published
4NV3
DownloadVisualize
BU of 4nv3 by Molmil
The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with valine.
Descriptor: ACETATE ION, Amino acid/amide ABC transporter substrate-binding protein, HAAT family, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-12-04
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with valine.
To be Published
4NSE
DownloadVisualize
BU of 4nse by Molmil
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE, H4B-FREE, L-ARG COMPLEX
Descriptor: ACETATE ION, ARGININE, CACODYLATE ION, ...
Authors:Raman, C.S, Li, H, Martasek, P, Kral, V, Masters, B.S.S, Poulos, T.L.
Deposit date:1998-10-07
Release date:1999-05-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center.
Cell(Cambridge,Mass.), 95, 1998
4NW9
DownloadVisualize
BU of 4nw9 by Molmil
Crystal structure of macrocycles containing Abeta17-23 (LVF(MEA)AED) and Abeta30-36 (AIIGL(ORN)V)
Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LVF(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION
Authors:Spencer, R.K, Li, H, Nowick, J.S.
Deposit date:2013-12-05
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36).
J.Am.Chem.Soc., 136, 2014
4PEV
DownloadVisualize
BU of 4pev by Molmil
Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
Descriptor: ADENOSINE, GLYCEROL, Membrane lipoprotein family protein
Authors:Chang, C, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-25
Release date:2014-05-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
to be published
4NAS
DownloadVisualize
BU of 4nas by Molmil
The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Descriptor: CALCIUM ION, CHLORIDE ION, FORMIC ACID, ...
Authors:Tan, K, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-10-22
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446.
To be Published
4MV2
DownloadVisualize
BU of 4mv2 by Molmil
Crystal structure of plu4264 protein from Photorhabdus luminescens
Descriptor: NICKEL (II) ION, SODIUM ION, plu4264
Authors:Michalska, K, Li, H, Jedrzejczak, R, Babnigg, G, Bingman, C.A, Yennamalli, R, Weerth, S, Thomas, M.G, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-09-23
Release date:2013-10-02
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 angstrom resolution.
Proteins, 83, 2015
4NW8
DownloadVisualize
BU of 4nw8 by Molmil
Crystal structure of macrocycles containing Abeta17-23 (LV(PHI)(MEA)AED) and Abeta30-36 (AIIGL(ORN)V)
Descriptor: CHLORIDE ION, Cyclic hexadecapeptide (ORN)LV(PHI)(MEA)AED(ORN)AIIGL(ORN)V, SODIUM ION
Authors:Spencer, R.K, Li, H, Nowick, J.S.
Deposit date:2013-12-05
Release date:2014-04-02
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:X-ray crystallographic structures of trimers and higher-order oligomeric assemblies of a peptide derived from A beta (17-36).
J.Am.Chem.Soc., 136, 2014
2BID
DownloadVisualize
BU of 2bid by Molmil
HUMAN PRO-APOPTOTIC PROTEIN BID
Descriptor: PROTEIN (BID)
Authors:Chou, J.J, Li, H, Salvesen, G.S, Yuan, J, Wagner, G.
Deposit date:1999-01-27
Release date:2000-02-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of BID, an intracellular amplifier of apoptotic signaling.
Cell(Cambridge,Mass.), 96, 1999
5F4Z
DownloadVisualize
BU of 5f4z by Molmil
The crystal structure of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus
Descriptor: (1~{R},2~{R})-2,3-dihydro-1~{H}-indene-1,2-diol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, BABNIGG, G, BINGMAN, C.A, YENNAMALLI, R, LOHMAN, J, Chang, C.Y, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-12-03
Release date:2016-02-17
Last modified:2020-09-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The crystal structure of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus
To Be Published
4OG2
DownloadVisualize
BU of 4og2 by Molmil
The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with leucine
Descriptor: Amino acid/amide ABC transporter substrate-binding protein, HAAT family, CHLORIDE ION, ...
Authors:Tan, K, Li, H, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-01-15
Release date:2014-01-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.099 Å)
Cite:The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with leucine
To be Published
7UQK
DownloadVisualize
BU of 7uqk by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQJ
DownloadVisualize
BU of 7uqj by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ATPgS and histone H3 tail in state II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7, Histone H3, ...
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon