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6YWU
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BU of 6ywu by Molmil
Human OMPD-domain of UMPS (K314AcK) in complex with UMP at 1.1 Angstroms resolution
Descriptor: GLYCEROL, SULFATE ION, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-04-30
Release date:2022-02-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6YWT
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BU of 6ywt by Molmil
Human OMPD-domain of UMPS (K314AcK) in complex with 6-hydroxy-UMP at 1.05 Angstroms resolution
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, PROLINE, Uridine 5'-monophosphate synthase
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-04-30
Release date:2022-02-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6YVO
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BU of 6yvo by Molmil
Human OMPD-domain of UMPS in complex with the substrate OMP at 1.25 Angstroms resolution, 3.55 MGy exposure
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-04-28
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
8EQ5
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BU of 8eq5 by Molmil
Crystal structure of the N-terminal kinase domain of RSK2 in complex with SPRED2 (131-160)
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside, Ribosomal protein S6 kinase alpha-3, Sprouty-related, ...
Authors:Bonsor, D.A, Lopez, J, McCormick, F, Simanshu, D.K.
Deposit date:2022-10-07
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The ribosomal S6 kinase 2 (RSK2)-SPRED2 complex regulates the phosphorylation of RSK substrates and MAPK signaling.
J.Biol.Chem., 299, 2023
6ZWZ
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BU of 6zwz by Molmil
Resting state structure of the OMPD-domain of human UMPS variant (K314AcK) at 1.2 Angstroms resolution
Descriptor: SULFATE ION, Uridine 5'-monophosphate synthase
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX1
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BU of 6zx1 by Molmil
OMPD-domain of human UMPS in complex with 6-Aza-UMP at 1.0 Angstroms resolution
Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, PROLINE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX0
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BU of 6zx0 by Molmil
OMPD-domain of human UMPS in complex with the substrate OMP at 1.25 Angstroms resolution
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZWY
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BU of 6zwy by Molmil
OMPD-domain of human UMPS in complex with UMP at 1.0 Angstroms resolution
Descriptor: GLYCEROL, PROLINE, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Tittmann, K, Rindfleisch, S.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX3
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BU of 6zx3 by Molmil
OMPD-domain of human UMPS in complex with 6-thiocarboxamido-UMP at 1.15 Angstroms resolution
Descriptor: GLYCEROL, PROLINE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Schimdt, T.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX2
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BU of 6zx2 by Molmil
OMPD-domain of human UMPS in complex with 6-carboxamido-UMP at 1.2 Angstroms resolution
Descriptor: PROLINE, SULFATE ION, Uridine 5'-monophosphate synthase, ...
Authors:Tittmann, K, Rindfleisch, S, Schimdt, T.
Deposit date:2020-07-29
Release date:2022-02-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7AM9
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BU of 7am9 by Molmil
OMPD-domain of human UMPS in complex with the substrate OMP at 0.99 Angstroms resolution
Descriptor: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
Authors:Tittmann, K, Rindfleisch, S, Krull, M.
Deposit date:2020-10-08
Release date:2021-11-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7ASQ
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BU of 7asq by Molmil
Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the reaction product UMP at 0.95 Angstrom resolution
Descriptor: GLYCEROL, SODIUM ION, SULFATE ION, ...
Authors:Rindfleisch, S, Rabe von Pappenheim, F.
Deposit date:2020-10-28
Release date:2021-11-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
7B2N
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BU of 7b2n by Molmil
Crystal structure of Chlamydomonas reinhardtii chloroplastic Fructose bisphosphate aldolase
Descriptor: CHLORIDE ION, Fructose-bisphosphate aldolase 1, chloroplastic, ...
Authors:Le Moigne, T, Lemaire, S.D, Henri, J.
Deposit date:2020-11-27
Release date:2021-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of chloroplast fructose-1,6-bisphosphate aldolase from the green alga Chlamydomonas reinhardtii.
J.Struct.Biol., 214, 2022
7CO1
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BU of 7co1 by Molmil
Crystal structure of SMAD2 in complex with wild-type CBP
Descriptor: CREB-binding protein, Mothers against decapentaplegic homolog 2
Authors:Miyazono, K, Wada, H, Ito, T, Tanokura, M.
Deposit date:2020-08-03
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for transcriptional coactivator recognition by SMAD2 in TGF-beta signaling.
Sci.Signal., 13, 2020
7OXZ
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BU of 7oxz by Molmil
VDR complex with a side-chain hydroxylated derivative of lithocholic acid
Descriptor: (3R,6R)-6-[(3R,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]heptane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
Authors:Rochel, N.
Deposit date:2021-06-23
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design, synthesis and evaluation of side-chain hydroxylated derivatives of lithocholic acid as potent agonists of the vitamin D receptor (VDR).
Bioorg.Chem., 115, 2021
7OY4
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BU of 7oy4 by Molmil
VDR complex of a side-chain hydroxylated derivatives of lithocholic acid
Descriptor: (3S,6R)-6-[(3R,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]heptane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
Authors:Rochel, N.
Deposit date:2021-06-23
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis and evaluation of side-chain hydroxylated derivatives of lithocholic acid as potent agonists of the vitamin D receptor (VDR).
Bioorg.Chem., 115, 2021
1F3J
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BU of 1f3j by Molmil
HISTOCOMPATIBILITY ANTIGEN I-AG7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, LYSOZYME C, ...
Authors:Latek, R.R, Unanue, E.R, Fremont, D.H.
Deposit date:2000-06-04
Release date:2000-09-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of peptide binding and presentation by the type I diabetes-associated MHC class II molecule of NOD mice.
Immunity, 12, 2000
1FD4
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BU of 1fd4 by Molmil
HUMAN BETA-DEFENSIN 2
Descriptor: BETA-DEFENSIN 2, SULFATE ION
Authors:Hoover, D.M, Lubkowski, J.
Deposit date:2000-07-19
Release date:2000-11-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of human beta-defensin-2 shows evidence of higher order oligomerization.
J.Biol.Chem., 275, 2000
5DMI
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BU of 5dmi by Molmil
Structure of the extracellular domain of the CD40 in complex with CHI220 FAB
Descriptor: Chi220 Fab heavy chain, Chi220 Fab light chain, SULFATE ION, ...
Authors:Sheriff, S.
Deposit date:2015-09-08
Release date:2016-06-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.69 Å)
Cite:Functional Antagonism of Human CD40 Achieved by Targeting a Unique Species-Specific Epitope.
J.Mol.Biol., 428, 2016
1FD3
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BU of 1fd3 by Molmil
HUMAN BETA-DEFENSIN 2
Descriptor: BETA-DEFENSIN 2, SULFATE ION
Authors:Hoover, D.M, Lubkowski, J.
Deposit date:2000-07-19
Release date:2000-11-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The structure of human beta-defensin-2 shows evidence of higher order oligomerization.
J.Biol.Chem., 275, 2000
5DMJ
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BU of 5dmj by Molmil
Structure of the extracellular domain of the CD40 in complex with 3H56-5 DAB
Descriptor: 3H65-5 domain antibody (dAb), POTASSIUM ION, Tumor necrosis factor receptor superfamily member 5
Authors:Sheriff, S.
Deposit date:2015-09-08
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Functional Antagonism of Human CD40 Achieved by Targeting a Unique Species-Specific Epitope.
J.Mol.Biol., 428, 2016
3LJE
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BU of 3lje by Molmil
The X-ray structure of zebrafish RNase5
Descriptor: ACETATE ION, SULFATE ION, Zebrafish RNase5
Authors:Russo Krauss, I, Merlino, A, Coscia, F, Mazzarella, L, Sica, F.
Deposit date:2010-01-26
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
3LN8
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BU of 3ln8 by Molmil
The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3
Descriptor: HYDROLASE, SULFATE ION
Authors:Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
Deposit date:2010-02-02
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
3LJD
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BU of 3ljd by Molmil
The X-ray structure of zebrafish RNase1 from a new crystal form at pH 4.5
Descriptor: ACETATE ION, SULFATE ION, Zebrafish RNase1
Authors:Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
Deposit date:2010-01-26
Release date:2010-12-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
4YNK
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BU of 4ynk by Molmil
Crystal structure of vitamin D receptor ligand binding domain complexed with a 19-norvitamin D compound
Descriptor: (1R,3R,7E,17beta)-17-{(5S)-5-hydroxy-5-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-1-yl]penta-1,3-diyn-1-yl}-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol, Coactivator peptide drip from cDNA FLJ50196, highly similar to Peroxisome proliferator-activated receptor-binding protein, ...
Authors:Watarai, Y, Ikura, T, Ito, N.
Deposit date:2015-03-10
Release date:2016-01-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis, Biological Activities, and X-ray Crystal Structural Analysis of 25-Hydroxy-25(or 26)-adamantyl-17-[20(22),23-diynyl]-21-norvitamin D Compounds
J.Med.Chem., 58, 2015

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PDB entries from 2024-11-06

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