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2WCD
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BU of 2wcd by Molmil
Crystal structure of the assembled cytolysin A pore
Descriptor: ETHYL MERCURY ION, HEMOLYSIN E, CHROMOSOMAL
Authors:Mueller, M, Grauschopf, U, Maier, T, Glockshuber, R, Ban, N.
Deposit date:2009-03-11
Release date:2009-05-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:The Structure of a Cytolytic Alpha-Helical Toxin Pore Reveals its Assembly Mechanism
Nature, 459, 2009
2VRH
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BU of 2vrh by Molmil
Structure of the E. coli trigger factor bound to a translating ribosome
Descriptor: 50S RIBOSOMAL PROTEIN L23, 50S RIBOSOMAL PROTEIN L24, 50S RIBOSOMAL PROTEIN L29, ...
Authors:Merz, F, Boehringer, D, Schaffitzel, C, Preissler, S, Hoffmann, A, Maier, T, Rutkowska, A, Lozza, J, Ban, N, Bukau, B, Deuerling, E.
Deposit date:2008-04-07
Release date:2008-06-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (19 Å)
Cite:Molecular Mechanism and Structure of Trigger Factor Bound to the Translating Ribosome.
Embo J., 27, 2008
2XKV
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BU of 2xkv by Molmil
Atomic Model of the SRP-FtsY Early Conformation
Descriptor: 4.5S RNA, CELL DIVISION PROTEIN FTSY, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Estrozi, L.F, Boehringer, D, Shan, S.-o, Ban, N, Schaffitzel, C.
Deposit date:2010-07-13
Release date:2010-12-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Cryo-Em Structure of the E. Coli Translating Ribosome in Complex with Srp and its Receptor.
Nat.Struct.Mol.Biol., 18, 2011
5MPP
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BU of 5mpp by Molmil
Structure of AaLS-wt
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Sasaki, E, Boehringer, D, Leibundgut, M, Ban, N, Hilvert, D.
Deposit date:2016-12-17
Release date:2017-03-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure and assembly of scalable porous protein cages.
Nat Commun, 8, 2017
5MMI
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BU of 5mmi by Molmil
Structure of the large subunit of the chloroplast ribosome
Descriptor: 23S ribosomal RNA, 4.5S ribosomal RNA, 50S ribosomal protein 6, ...
Authors:Bieri, P, Leibundgut, M, Saurer, M, Boehringer, D, Ban, N.
Deposit date:2016-12-10
Release date:2017-01-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The complete structure of the chloroplast 70S ribosome in complex with translation factor pY.
EMBO J., 36, 2017
5MQ7
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BU of 5mq7 by Molmil
Structure of AaLS-13
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Sasaki, E, Boehringer, D, Leibundgut, M, Ban, N, Hilvert, D.
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Structure and assembly of scalable porous protein cages.
Nat Commun, 8, 2017
5MMJ
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BU of 5mmj by Molmil
Structure of the small subunit of the chloroplast ribosome
Descriptor: 16S ribosomal RNA, 30S ribosomal protein 2, chloroplastic, ...
Authors:Bieri, P, Leibundgut, M, Saurer, M, Boehringer, D, Ban, N.
Deposit date:2016-12-10
Release date:2017-01-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The complete structure of the chloroplast 70S ribosome in complex with translation factor pY.
EMBO J., 36, 2017
5MQ3
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BU of 5mq3 by Molmil
Structure of AaLS-neg
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Sasaki, E, Boehringer, D, Leibundgut, M, Ban, N, Hilvert, D.
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Structure and assembly of scalable porous protein cages.
Nat Commun, 8, 2017
5MMM
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BU of 5mmm by Molmil
Structure of the 70S chloroplast ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein 2, ...
Authors:Bieri, P, Leibundgut, M, Saurer, M, Boehringer, D, Ban, N.
Deposit date:2016-12-11
Release date:2017-01-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The complete structure of the chloroplast 70S ribosome in complex with translation factor pY.
EMBO J., 36, 2017
5NCO
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BU of 5nco by Molmil
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
Descriptor: 23S rRNA, 4.5S SRP RNA (Ffs), 50S ribosomal protein L10, ...
Authors:Jomaa, A, Hwang Fu, Y, Boerhinger, D, Leibundgut, M, Shan, S.O, Ban, N.
Deposit date:2017-03-06
Release date:2017-05-24
Last modified:2018-03-28
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of the quaternary complex between SRP, SR, and translocon bound to the translating ribosome.
Nat Commun, 8, 2017
2UV8
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BU of 2uv8 by Molmil
Crystal structure of yeast fatty acid synthase with stalled acyl carrier protein at 3.1 angstrom resolution
Descriptor: FATTY ACID SYNTHASE SUBUNIT ALPHA (FAS2), FATTY ACID SYNTHASE SUBUNIT BETA (FAS1), FLAVIN MONONUCLEOTIDE
Authors:Leibundgut, M, Jenni, S, Frick, C, Ban, N.
Deposit date:2007-03-09
Release date:2007-04-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Substrate Delivery by Acyl Carrier Protein in the Yeast Fatty Acid Synthase
Science, 316, 2007
6YDP
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BU of 6ydp by Molmil
55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)
Descriptor: 12S rRNA, 28S ribosomal protein S16, mitochondrial, ...
Authors:Kummer, E, Ban, N.
Deposit date:2020-03-20
Release date:2020-07-15
Last modified:2020-08-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.
Embo J., 39, 2020
6YDW
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BU of 6ydw by Molmil
55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)
Descriptor: 12S rRNA, 28S ribosomal protein S16, mitochondrial, ...
Authors:Kummer, E, Ban, N.
Deposit date:2020-03-21
Release date:2020-07-15
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.
Embo J., 39, 2020
6YXX
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BU of 6yxx by Molmil
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, 50S ribosomal protein L13, putative, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020
6YXY
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BU of 6yxy by Molmil
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020
4BTS
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BU of 4bts by Molmil
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Descriptor: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN RACK1, 40S RIBOSOMAL PROTEIN RPS10E, ...
Authors:Weisser, M, Voigts-Hoffmann, F, Rabl, J, Leibundgut, M, Ban, N.
Deposit date:2013-06-19
Release date:2013-07-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.703 Å)
Cite:The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A.
Nat. Struct. Mol. Biol., 20, 2013
4BSZ
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BU of 4bsz by Molmil
Crystal Structure of the Yeast Ribosomal Protein Rps3 in Complex with its Chaperone Yar1
Descriptor: 40S RIBOSOMAL PROTEIN S3, ANKYRIN REPEAT-CONTAINING PROTEIN YAR1
Authors:Holzer, S, Ban, N, Klinge, S.
Deposit date:2013-06-12
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.842 Å)
Cite:Crystal Structure of the Yeast Ribosomal Protein Rps3 in Complex with its Chaperone Yar1
J.Mol.Biol., 425, 2013
6ZWM
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BU of 6zwm by Molmil
cryo-EM structure of human mTOR complex 2, overall refinement
Descriptor: ACETYL GROUP, INOSITOL HEXAKISPHOSPHATE, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Scaiola, A, Mangia, F, Imseng, S, Boehringer, D, Ban, N, Maier, T.
Deposit date:2020-07-28
Release date:2020-11-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The 3.2- angstrom resolution structure of human mTORC2.
Sci Adv, 6, 2020
6ZOJ
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BU of 6zoj by Molmil
SARS-CoV-2-Nsp1-40S complex, composite map
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-22
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
6ZOK
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BU of 6zok by Molmil
SARS-CoV-2-Nsp1-40S complex, focused on body
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-29
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
6ZWO
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BU of 6zwo by Molmil
cryo-EM structure of human mTOR complex 2, focused on one half
Descriptor: ACETYL GROUP, INOSITOL HEXAKISPHOSPHATE, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Scaiola, A, Mangia, F, Imseng, S, Boehringer, D, Ban, N, Maier, T.
Deposit date:2020-07-28
Release date:2020-11-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The 3.2- angstrom resolution structure of human mTORC2.
Sci Adv, 6, 2020
6ZOL
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BU of 6zol by Molmil
SARS-CoV-2-Nsp1-40S complex, focused on head
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ...
Authors:Schubert, K, Karousis, E.D, Jomaa, A, Scaiola, A, Echeverria, B, Gurzeler, L.-A, Leibundgut, M.L, Thiel, V, Muehlemann, O, Ban, N.
Deposit date:2020-07-07
Release date:2020-07-22
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Nat.Struct.Mol.Biol., 27, 2020
4CE4
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BU of 4ce4 by Molmil
39S large subunit of the porcine mitochondrial ribosome
Descriptor: 16S Ribosomal RNA, ICT1, MRPL13, ...
Authors:Greber, B.J, Boehringer, D, Leitner, A, Bieri, P, Voigts-Hoffmann, F, Erzberger, J.P, Leibundgut, M, Aebersold, R, Ban, N.
Deposit date:2013-11-08
Release date:2013-12-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Architecture of the Large Subunit of the Mammalian Mitochondrial Ribosome.
Nature, 505, 2014
3D2V
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BU of 3d2v by Molmil
Structure of the eukaryotic TPP-specific riboswitch bound to the antibacterial compound pyrithiamine pyrophosphate
Descriptor: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM, MAGNESIUM ION, TPP-specific riboswitch
Authors:Thore, S, Frick, C, Ban, N.
Deposit date:2008-05-09
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
J.Am.Chem.Soc., 130, 2008
5OA3
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BU of 5oa3 by Molmil
Human 40S-eIF2D-re-initiation complex
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Weisser, M, Schaefer, T, Leibundgut, M, Boehringer, D, Aylett, C.H.S, Ban, N.
Deposit date:2017-06-20
Release date:2017-08-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural and Functional Insights into Human Re-initiation Complexes.
Mol. Cell, 67, 2017

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PDB entries from 2024-10-16

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