Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8U9O
DownloadVisualize
BU of 8u9o by Molmil
Solution structure of RsgI9 CRE domain from C. thermocellum
Descriptor: Anti-sigma-I factor RsgI9
Authors:Takayesu, A, Mahoney, B.J, Clubb, R.T.
Deposit date:2023-09-19
Release date:2024-04-24
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Insight into the autoproteolysis mechanism of the RsgI9 anti-sigma factor from Clostridium thermocellum.
Proteins, 92, 2024
5TB7
DownloadVisualize
BU of 5tb7 by Molmil
Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group P212121
Descriptor: COPPER (II) ION, Nitrite reductase, PHOSPHATE ION
Authors:Hamza, A, Williamson, Z.A, Reed, R.W, Sikora, A.E, Korotkov, K.V.
Deposit date:2016-09-11
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA.
Antimicrob. Agents Chemother., 61, 2017
8RI3
DownloadVisualize
BU of 8ri3 by Molmil
Crystal structure of transplatin/B-DNA adduct obtained upon 7 days of soaking
Descriptor: AMMONIA, CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), ...
Authors:Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-12-18
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8V6K
DownloadVisualize
BU of 8v6k by Molmil
Apo-state cryo-EM structure of human TRPV3 in cNW30 nanodiscs
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Transient receptor potential cation channel subfamily V member 3
Authors:Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I.
Deposit date:2023-12-01
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv, 10, 2024
8V6O
DownloadVisualize
BU of 8v6o by Molmil
Inactivated-state cryo-EM structure of human TRPV3 in presence of 2-APB in cNW30 nanodiscs
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-aminoethyl diphenylborinate, SODIUM ION, ...
Authors:Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I.
Deposit date:2023-12-01
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv, 10, 2024
6SIS
DownloadVisualize
BU of 6sis by Molmil
Crystal structure of macrocyclic PROTAC 1 in complex with the second bromodomain of human Brd4 and pVHL:ElonginC:ElonginB
Descriptor: Bromodomain-containing protein 4, Elongin-B, Elongin-C, ...
Authors:Hughes, S.J, Testa, A, Ciulli, A.
Deposit date:2019-08-10
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure-Based Design of a Macrocyclic PROTAC.
Angew.Chem.Int.Ed.Engl., 59, 2020
8V6N
DownloadVisualize
BU of 8v6n by Molmil
Open-state cryo-EM structure of human TRPV3 in presence of 2-APB in cNW30 nanodiscs
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-aminoethyl diphenylborinate, ARACHIDONIC ACID, ...
Authors:Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I.
Deposit date:2023-12-01
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv, 10, 2024
8U6Y
DownloadVisualize
BU of 8u6y by Molmil
Preholo-Proteasome from Beta 3 D205 deletion
Descriptor: Proteasome assembly chaperone 2, Proteasome chaperone 1, Proteasome maturation factor UMP1, ...
Authors:Walsh Jr, R.M, Rawson, S, Velez, B, Blickling, M, Razi, A, Hanna, J.
Deposit date:2023-09-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of autocatalytic activation during proteasome assembly.
Nat.Struct.Mol.Biol., 2024
6SEB
DownloadVisualize
BU of 6seb by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, ACETATE ION, Beta-galactosidase, ...
Authors:Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
Deposit date:2019-07-29
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.272 Å)
Cite:Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
5N4A
DownloadVisualize
BU of 5n4a by Molmil
Crystal structure of Chlamydomonas IFT80
Descriptor: GLYCEROL, Intraflagellar transport protein 80, OXALATE ION
Authors:Taschner, M, Mourao, A.
Deposit date:2017-02-10
Release date:2018-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of intraflagellar transport protein 80 reveals a homo-dimer required for ciliogenesis.
Elife, 7, 2018
1I36
DownloadVisualize
BU of 1i36 by Molmil
Structure of Conserved Protein MTH1747 of Unknown Function Reveals Structural Similarity with 3-Hydroxyacid Dehydrogenases
Descriptor: CONSERVED HYPOTHETICAL PROTEIN MTH1747, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korolev, S.V, Dementieva, I.S, Christendat, D, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-02-13
Release date:2002-05-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:STRUCTURAL SIMILARITIES OF MTH1747 HYPOTHETICAL PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM WITH 3-HYDROXYACID DEHYDROGENASES
to be published
5N4U
DownloadVisualize
BU of 5n4u by Molmil
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule 5-(2-amino-1,3-thiazol-4-yl)-1,3-dihydrobenzimidazol-2-one
Descriptor: 5-(2-azanyl-1,3-thiazol-4-yl)-1,3-dihydrobenzimidazol-2-one, Pimtide, Serine/threonine-protein kinase pim-1
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-11
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:A crystallographic fragment study with human Pim-1 kinase
to be published
2IG8
DownloadVisualize
BU of 2ig8 by Molmil
Crystal structure of a Protein of Unknown Function PA3499 from Pseudomonas aeruginosa
Descriptor: Hypothetical protein PA3499
Authors:Zhang, R, Xu, X, Gu, J, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-09-22
Release date:2006-10-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of a hypothetical protein PA3499 from Pseudomonas aeruginosa
To be Published
1U3N
DownloadVisualize
BU of 1u3n by Molmil
A SOD-like protein from B. subtilis, unstructured in solution, becomes ordered in the crystal: implications for function and for fibrillogenesis
Descriptor: Hypothetical superoxide dismutase-like protein yojM
Authors:Banci, L, Bertini, I, Calderone, V, Cramaro, F, Del Conte, R, Fantoni, A, Mangani, S, Quattrone, A, Viezzoli, M.S.
Deposit date:2004-07-22
Release date:2005-05-03
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A prokaryotic superoxide dismutase paralog lacking two Cu ligands: from largely unstructured in solution to ordered in the crystal.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5SXP
DownloadVisualize
BU of 5sxp by Molmil
STRUCTURAL BASIS FOR THE INTERACTION BETWEEN ITCH PRR AND BETA-PIX
Descriptor: E3 ubiquitin-protein ligase Itchy homolog, Rho guanine nucleotide exchange factor 7
Authors:Cappadocia, L, Desrochers, G, Lussier-Price, M, Angers, A, Omichinski, J.G.
Deposit date:2016-08-09
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular basis of interactions between SH3 domain-containing proteins and the proline-rich region of the ubiquitin ligase Itch.
J. Biol. Chem., 292, 2017
5NAY
DownloadVisualize
BU of 5nay by Molmil
Crystal structures of homooligomers of collagen type IV. alpha1NC1
Descriptor: CHLORIDE ION, Collagen alpha-1(IV) chain, SULFATE ION
Authors:Casino, P, Marina, A.
Deposit date:2017-02-28
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of collagen IV globular domains: insight into associated pathologies, folding and network assembly.
IUCrJ, 5, 2018
6SQC
DownloadVisualize
BU of 6sqc by Molmil
Crystal structure of complex between nuclear coactivator binding domain of CBP and [1040-1086]ACTR containing alpha-methylated Leu1055 and Leu1076
Descriptor: 1,2-ETHANEDIOL, Maltose/maltodextrin-binding periplasmic protein,CREB-binding protein, Nuclear receptor coactivator 3, ...
Authors:Bauer, V, Schmidtgall, B, Gogl, G, Dolenc, j, Osz, J, Kostmann, C, Mitschler, A, Cousido-Siah, A, Rochel, N, Trave, G, Kieffer, B, Torbeev, V.
Deposit date:2019-09-03
Release date:2020-09-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Conformational editing of intrinsically disordered protein by alpha-methylation.
Chem Sci, 12, 2020
5NL9
DownloadVisualize
BU of 5nl9 by Molmil
Crystal structure of a peroxide stress regulator from Leptospira interrogans
Descriptor: POTASSIUM ION, Transcriptional regulator (FUR family), UNKNOWN ATOM OR ION, ...
Authors:Saul, F.A, Haouz, A, Picardeau, M, Benaroudj, N.
Deposit date:2017-04-04
Release date:2017-11-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the Leptospira interrogans peroxide stress regulator (PerR), an atypical PerR devoid of a structural metal-binding site.
J. Biol. Chem., 293, 2018
1CAX
DownloadVisualize
BU of 1cax by Molmil
DETERMINATION OF THREE CRYSTAL STRUCTURES OF CANAVALIN BY MOLECULAR REPLACEMENT
Descriptor: CANAVALIN
Authors:Ko, T-P, Ng, J.D, Day, J, Greenwood, A, McPherson, A.
Deposit date:1993-06-10
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Determination of three crystal structures of canavalin by molecular replacement.
Acta Crystallogr.,Sect.D, 49, 1993
5TBF
DownloadVisualize
BU of 5tbf by Molmil
Crystal structure of SeMet derivatives of domain2 and domain 3 of RctB
Descriptor: Translation elongation factor
Authors:Li, M, Wlodawer, A, Chattoraj, D, Jha, J.
Deposit date:2016-09-12
Release date:2017-04-12
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Crystal Structure of core domains of RctB
To Be Published
5NNL
DownloadVisualize
BU of 5nnl by Molmil
Inactive dihydroorotase-like domain of Chaetomium thermophilum CAD-like multifunctional protein
Descriptor: Inactive dihydroorotase-like domain
Authors:Ramon-Maiques, S, Moreno-Morcillo, M, Grande-Garcia, A.
Deposit date:2017-04-10
Release date:2017-06-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural Insight into the Core of CAD, the Multifunctional Protein Leading De Novo Pyrimidine Biosynthesis.
Structure, 25, 2017
8US2
DownloadVisualize
BU of 8us2 by Molmil
P22121 Crystal structure of TamA from Pseudomonas aeruginosa at 3.95 Ang
Descriptor: Translocation and assembly module subunit TamA
Authors:Mellouk, A, Moraes, T.F, Calmettes, C.
Deposit date:2023-10-27
Release date:2024-06-26
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (3.955 Å)
Cite:POTRA domains of the TamA insertase interact with the outer membrane and modulate membrane properties.
Proc.Natl.Acad.Sci.USA, 121, 2024
8V48
DownloadVisualize
BU of 8v48 by Molmil
CryoEM structure of AriA-AriB complex (Form III)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB
Authors:Deep, A, Corbett, K.D.
Deposit date:2023-11-28
Release date:2024-06-26
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Architecture and activation mechanism of the bacterial PARIS defence system
Nature, 2024
8UE2
DownloadVisualize
BU of 8ue2 by Molmil
Structure of TREK-1CG*:ML335
Descriptor: CADMIUM ION, DECANE, HEXADECANE, ...
Authors:Mondal, A, Lee, H, Minor, D.L.
Deposit date:2023-09-29
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of TREK-1CG*:ML335
To Be Published
8V49
DownloadVisualize
BU of 8v49 by Molmil
CryoEM structure of AriA (E393Q) sensory subunit
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin
Authors:Deep, A, Corbett, K.D.
Deposit date:2023-11-28
Release date:2024-06-26
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Architecture and activation mechanism of the bacterial PARIS defence system
Nature, 2024

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon