Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3T0W
DownloadVisualize
BU of 3t0w by Molmil
Fluorogen activating protein M8VL in complex with dimethylindole red
Descriptor: 1-(3-sulfopropyl)-4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, ...
Authors:Stanfield, R, Senutovitch, N, Bhattacharyya, S, Rule, G, Wilson, I.A, Armitage, B, Waggoner, A.S, Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
3T0X
DownloadVisualize
BU of 3t0x by Molmil
Fluorogen Activating Protein M8VLA4(S55P) in complex with dimethylindole red
Descriptor: 1,2-ETHANEDIOL, 1-(3-sulfopropyl)-4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium, Immunoglobulin variable lambda domain M8VLA4(S55P), ...
Authors:Stanfield, R, Senutovitch, N, Bhattacharyya, S, Rule, G, Wilson, I.A, Armitage, B, Waggoner, A.S, Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
3T0V
DownloadVisualize
BU of 3t0v by Molmil
Unliganded fluorogen activating protein M8VL
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stanfield, R, Senutovitch, N, Bhattacharyya, S, Rule, G, Wilson, I.A, Armitage, B, Waggoner, A.S, Berget, P.
Deposit date:2011-07-20
Release date:2012-03-21
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Biochemistry, 51, 2012
2KGN
DownloadVisualize
BU of 2kgn by Molmil
Solution structure of Ste5PM24 in the zwitterionic DPC micelle
Descriptor: Protein STE5
Authors:Bhunia, A, Bhattacharjya, S.
Deposit date:2009-03-13
Release date:2010-03-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of Ste5PM24 in the zwitterionic DPC micelle
To be Published
3T0J
DownloadVisualize
BU of 3t0j by Molmil
Crystal structure of inositol monophosphatase - II from Staphylococcus aureus MSSA476
Descriptor: Inositol monophosphatase family protein, PHOSPHATE ION, TETRAETHYLENE GLYCOL
Authors:Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K.
Deposit date:2011-07-20
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of inositol monophosphatase - II from Staphylococcus aureus MSSA476
to be published
2HXW
DownloadVisualize
BU of 2hxw by Molmil
Crystal Structure of Peb3 from Campylobacter jejuni
Descriptor: CITRATE ANION, Major antigenic peptide PEB3
Authors:Rangarajan, E.S, Bhatia, S, Watson, D.C, Munger, C, Cygler, M, Matte, A, Young, N.M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-08-04
Release date:2007-05-01
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural context for protein N-glycosylation in bacteria: The structure of PEB3, an adhesin from Campylobacter jejuni.
Protein Sci., 16, 2007
2KNS
DownloadVisualize
BU of 2kns by Molmil
Helical Hairpin Structure of Pardaxin in Lipopolysaccharide Micelles: Studied by NMR Spectroscopy
Descriptor: Pardaxin P-4
Authors:Bhunia, A, Bhattacharjya, S, Ramamoorthy, A.
Deposit date:2009-09-03
Release date:2009-12-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of pardaxin, a pore-forming antimicrobial peptide, in lipopolysaccharide Micelles: Mechanism of outer membrane permeabilization
J.Biol.Chem., 285, 2010
2L36
DownloadVisualize
BU of 2l36 by Molmil
Solution structure of MSI-594 derived mutant peptide MSI594F5A in Lipopolysaccharide Micelles
Descriptor: MSI594
Authors:Bhunia, A, Bhattacharjya, S.
Deposit date:2010-09-07
Release date:2011-07-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure, interactions, and antibacterial activities of MSI-594 derived mutant peptide MSI-594F5A in lipopolysaccharide micelles: role of the helical hairpin conformation in outer-membrane permeabilization
J.Am.Chem.Soc., 132, 2010
2LKE
DownloadVisualize
BU of 2lke by Molmil
Structures and Interaction Analyses of the Integrin Alpha-M Beta-2 Cytoplasmic Tails
Descriptor: Integrin alpha-M
Authors:Chua, G.L, Tang, X.Y, Amalraj, M, Bhattacharjya, S, Tan, S.M.
Deposit date:2011-10-11
Release date:2011-11-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures and interaction analyses of the integrin alphaMbeta2 cytoplasmic tails
J.Biol.Chem., 2011
2LM8
DownloadVisualize
BU of 2lm8 by Molmil
Structure, Activity and Interactions of the Cysteine Deleted Analog of Tachyplesin-1 with Lipopolysaccharide Micelles
Descriptor: CDT-LPS
Authors:Joshi, M, Bhattacharjya, S, Saravanan, R.
Deposit date:2011-11-25
Release date:2012-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, activity and interactions of the cysteine deleted analog of tachyplesin-1 with lipopolysaccharide micelle: Mechanistic insights into outer-membrane permeabilization and endotoxin neutralization.
Biochim.Biophys.Acta, 1818, 2012
2LKJ
DownloadVisualize
BU of 2lkj by Molmil
Structures and Interaction Analyses of the Integrin Alpha-M Beta-2 Cytoplasmic Tails
Descriptor: Integrin alpha-M
Authors:Chua, G.L, Tang, X.Y, Amalraj, M, Tan, S.M, Bhattacharjya, S.
Deposit date:2011-10-12
Release date:2011-11-02
Last modified:2011-11-16
Method:SOLUTION NMR
Cite:Structures and interaction analyses of the integrin alphaMbeta2 cytoplasmic tails
J.Biol.Chem., 2011
2L4U
DownloadVisualize
BU of 2l4u by Molmil
Solution structure of Ste5PM24 in the presence of SDS micelle
Descriptor: 24mer peptide from Protein STE5
Authors:Bhunia, A, Bhattacharjya, S.
Deposit date:2010-10-15
Release date:2010-10-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of Ste5Pm24 in Sds Micelle
To be Published
2LUV
DownloadVisualize
BU of 2luv by Molmil
Structure and Binding Interface of the Cytosolic Tails of aXb2 Integrin
Descriptor: Integrin alpha-X
Authors:Chua, G.L, Tang, X, Patra, T.A, Tan, S.M, Bhattacharjya, S.
Deposit date:2012-06-21
Release date:2012-07-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Binding Interface of the Cytosolic Tails of aXb2 Integrin
To be Published
2MQ2
DownloadVisualize
BU of 2mq2 by Molmil
Cysteine Deleted Protegrin-1 (CDP-1): Anti-bacterial Activity, Outer-Membrane Disruption and Selectivity
Descriptor: CDP-1 peptide, Cysteine Deleted Protegrin-1
Authors:Mohanram, H, Bhattacharjya, S.
Deposit date:2014-06-11
Release date:2014-07-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cysteine deleted protegrin-1 (CDP-1): anti-bacterial activity, outer-membrane disruption and selectivity.
Biochim.Biophys.Acta, 1840, 2014
2MQ4
DownloadVisualize
BU of 2mq4 by Molmil
Cysteine Deleted Protegrin-1 (CDP-1): Anti-bacterial Activity, Outer-Membrane Disruption and Selectivity
Descriptor: RR11 peptide from Cysteine Deleted Protegrin-1
Authors:Mohanram, H, Bhattacharjya, S.
Deposit date:2014-06-12
Release date:2014-07-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cysteine deleted protegrin-1 (CDP-1): anti-bacterial activity, outer-membrane disruption and selectivity.
Biochim.Biophys.Acta, 1840, 2014
2MQ5
DownloadVisualize
BU of 2mq5 by Molmil
Cysteine Deleted Protegrin-1 (CDP-1): Anti-bacterial Activity, Outer-Membrane Disruption and Selectivity
Descriptor: LR10 peptide from Cysteine Deleted Protegrin-1
Authors:Mohanram, H, Bhattacharjya, S.
Deposit date:2014-06-12
Release date:2014-07-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cysteine deleted protegrin-1 (CDP-1): anti-bacterial activity, outer-membrane disruption and selectivity.
Biochim.Biophys.Acta, 1840, 2014
7EVR
DownloadVisualize
BU of 7evr by Molmil
Crystal structure of hnRNP L RRM2 in complex with SETD2
Descriptor: Heterogeneous nuclear ribonucleoprotein L, SHI domain from Histone-lysine N-methyltransferase SETD2
Authors:Li, F.D, Wang, S.M.
Deposit date:2021-05-22
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the interaction between SETD2 methyltransferase and hnRNP L paralogs for governing co-transcriptional splicing.
Nat Commun, 12, 2021
7EVS
DownloadVisualize
BU of 7evs by Molmil
Crystal structure of hnRNP LL RRM2 in complex with SETD2
Descriptor: Heterogeneous nuclear ribonucleoprotein L-like, SHI domain from Histone-lysine N-methyltransferase SETD2, SULFATE ION
Authors:Li, F.D, Wang, S.M.
Deposit date:2021-05-22
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of the interaction between SETD2 methyltransferase and hnRNP L paralogs for governing co-transcriptional splicing.
Nat Commun, 12, 2021
6TWA
DownloadVisualize
BU of 6twa by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with PSB12646 (an AOPCP derivative, compound 20 in publication) in the closed state
Descriptor: 5'-nucleotidase, CALCIUM ION, ZINC ION, ...
Authors:Pippel, J, Strater, N.
Deposit date:2020-01-12
Release date:2020-02-19
Last modified:2020-04-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TW0
DownloadVisualize
BU of 6tw0 by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with PSB12690 (an AOPCP derivative, compound 10 in publication) in the closed state
Descriptor: 5'-nucleotidase, ZINC ION, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-azanyl-2-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
Authors:Pippel, J, Strater, N.
Deposit date:2020-01-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TWF
DownloadVisualize
BU of 6twf by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with PSB12604 (an AOPCP derivative, compound 21 in publication) in the closed state
Descriptor: 5'-nucleotidase, CALCIUM ION, ZINC ION, ...
Authors:Pippel, J, Strater, N.
Deposit date:2020-01-13
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TVX
DownloadVisualize
BU of 6tvx by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with PSB12676 (an AOPCP derivative, compound 9 in paper) in the closed state
Descriptor: 5'-nucleotidase, ZINC ION, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
Authors:Pippel, J, Strater, N.
Deposit date:2020-01-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TVE
DownloadVisualize
BU of 6tve by Molmil
Unliganded human CD73 (5'-nucleotidase) in the open state
Descriptor: 5'-nucleotidase, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Scaletti, E, Strater, N.
Deposit date:2020-01-09
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6TVG
DownloadVisualize
BU of 6tvg by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with AMPCP in the open state
Descriptor: 5'-nucleotidase, ecto (CD73), isoform CRA_a, ...
Authors:Scaletti, E, Strater, N.
Deposit date:2020-01-09
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:2-Substituted alpha , beta-Methylene-ADP Derivatives: Potent Competitive Ecto-5'-nucleotidase (CD73) Inhibitors with Variable Binding Modes.
J.Med.Chem., 63, 2020
6S7H
DownloadVisualize
BU of 6s7h by Molmil
Human CD73 (5'-nucleotidase) in complex with PSB12489 (an AOPCP derivative) in the closed state
Descriptor: (N6,N6)-methyl,benzyl-C2-chloro-(alpha,beta)-methylene-ADP, 5'-nucleotidase, CALCIUM ION, ...
Authors:Pippel, J, Strater, N.
Deposit date:2019-07-04
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-Ray Co-Crystal Structure Guides the Way to Subnanomolar Competitive Ecto-5'-Nucleotidase (CD73) Inhibitors for Cancer Immunotherapy
Adv Ther, 2019

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon