Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QME
DownloadVisualize
BU of 4qme by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphinic dipeptide analogue LL-(R,S)-hPheP[CH2]Phe
Descriptor: (2S)-3-[(S)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]-2-benzylpropanoic acid, Aminopeptidase N, GLYCEROL, ...
Authors:Nocek, B, Vassilious, S, Mulligan, R, Berlicki, L, Mucha, A, Joachimiak, A.
Deposit date:2014-06-16
Release date:2014-10-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structure-guided, single-point modifications in the phosphinic dipeptide structure yield highly potent and selective inhibitors of neutral aminopeptidases.
J.Med.Chem., 57, 2014
4QN8
DownloadVisualize
BU of 4qn8 by Molmil
The crystal structure of an effector protein VipE from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: BETA-MERCAPTOETHANOL, VipE
Authors:Tan, K, Xu, X, Cui, H, Liu, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-06-17
Release date:2014-07-16
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:The crystal structure of an effector protein VipE from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
4QUO
DownloadVisualize
BU of 4quo by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphinic dipeptide analogue LL-(R,S)-hPheP[CH2]Phe(3-CH2NH2)
Descriptor: (2S)-2-[3-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid, Aminopeptidase N, GLYCEROL, ...
Authors:Nocek, B, Mulligan, R, Joachimiak, A, Vassiliou, S, Berlicki, L, Mucha, A.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure-guided, single-point modifications in the phosphinic dipeptide structure yield highly potent and selective inhibitors of neutral aminopeptidases.
J.Med.Chem., 57, 2014
4R0J
DownloadVisualize
BU of 4r0j by Molmil
The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
Descriptor: CHLORIDE ION, SULFATE ION, Uncharacterized protein
Authors:Tan, K, Xu, X, Cui, H, Liu, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-07-31
Release date:2014-08-13
Method:X-RAY DIFFRACTION (1.715 Å)
Cite:The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
To be Published
4RD8
DownloadVisualize
BU of 4rd8 by Molmil
The crystal structure of a functionally-unknown protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: Uncharacterized protein
Authors:Tan, K, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-18
Release date:2014-10-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of a functionally-unknown protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
4RHA
DownloadVisualize
BU of 4rha by Molmil
Structure of the C-terminal domain of outer-membrane protein OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Outer membrane protein A, ...
Authors:Cuff, M.E, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-01
Release date:2014-10-29
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
4PU2
DownloadVisualize
BU of 4pu2 by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphonic acid analogue of leucine L-(R)-LeuP
Descriptor: Aminopeptidase N, GLYCEROL, LEUCINE PHOSPHONIC ACID, ...
Authors:Nocek, B, Vassiliou, S, Berlicki, L, Mulligan, R, Mucha, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-03-11
Release date:2014-06-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Crystal structure of Aminopeptidase N in complex with the phosphonic acid analogue of leucine
To be Published
2PEV
DownloadVisualize
BU of 2pev by Molmil
Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution exceeds concentration of IDD594.
Descriptor: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
Authors:Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A.
Deposit date:2007-04-03
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Crystal packing modifies ligand binding affinity: The case of aldose reductase.
Proteins, 80, 2012
2PFH
DownloadVisualize
BU of 2pfh by Molmil
Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is less than concentration of IDD594.
Descriptor: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
Authors:Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A.
Deposit date:2007-04-05
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Crystal packing modifies ligand binding affinity: The case of aldose reductase.
Proteins, 80, 2012
2PF8
DownloadVisualize
BU of 2pf8 by Molmil
Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is equal to concentration of IDD594.
Descriptor: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
Authors:Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A.
Deposit date:2007-04-04
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Crystal packing modifies ligand binding affinity: The case of aldose reductase.
Proteins, 80, 2012
4PVB
DownloadVisualize
BU of 4pvb by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphonic acid analogue of leucine (D-(S)-LeuP)
Descriptor: Aminopeptidase N, PHOSPHATE ION, SULFATE ION, ...
Authors:Nocek, B, Vassiliou, S, Berlicki, L, Mulligan, R, Mucha, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-03-16
Release date:2014-06-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Aminopeptidase N in complex with the phosphonic acid analogue of leucine (D-(S)-LeuP)
To be Published
4PQA
DownloadVisualize
BU of 4pqa by Molmil
Crystal Structure of succinyl-diaminopimelate desuccinylase from Neisseria meningitidis MC58 in complex with the Inhibitor Captopril
Descriptor: L-CAPTOPRIL, SULFATE ION, Succinyl-diaminopimelate desuccinylase, ...
Authors:Nocek, B, Starus, A, Holz, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-01
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Inhibition of the dapE-Encoded N-Succinyl-L,L-diaminopimelic Acid Desuccinylase from Neisseria meningitidis by L-Captopril.
Biochemistry, 54, 2015
4Q63
DownloadVisualize
BU of 4q63 by Molmil
Crystal Structure of Legionella Uncharacterized Protein Lpg0364
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Kim, Y, Evdokimova, E, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-21
Release date:2014-05-07
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Crystal Structure of Legionella Uncharacterized Protein Lpg0364
To be Published
2QXW
DownloadVisualize
BU of 2qxw by Molmil
Perdeuterated alr2 in complex with idd594
Descriptor: Aldose reductase, CITRIC ACID, IDD594, ...
Authors:Blakeley, M.P, Ruiz, F, Cachau, R, Hazemann, I, Meilleur, F, Mitschler, A, Ginell, S, Afonine, P, Ventura, O, Cousido-Siah, A, Joachimiak, A, Myles, D, Podjarny, A.
Deposit date:2007-08-13
Release date:2008-01-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Quantum model of catalysis based on a mobile proton revealed by subatomic x-ray and neutron diffraction studies of h-aldose reductase.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4ONW
DownloadVisualize
BU of 4onw by Molmil
Crystal structure of the catalytic domain of DapE protein from V.cholerea
Descriptor: 1,2-ETHANEDIOL, 1,4-BUTANEDIOL, ACETATE ION, ...
Authors:Nocek, B, Makowska-Grzyska, M, Jedrzejczak, R, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-29
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Dimerization Domain in DapE Enzymes Is required for Catalysis.
Plos One, 9, 2014
4OP4
DownloadVisualize
BU of 4op4 by Molmil
Crystal structure of the catalytic domain of DapE protein from V.cholerea in the Zn bound form
Descriptor: 1,2-ETHANEDIOL, 1,4-BUTANEDIOL, GLYCEROL, ...
Authors:Nocek, B, Makowska-Grzyska, M, Jedrzejczak, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-02-04
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:The Dimerization Domain in DapE Enzymes Is required for Catalysis.
Plos One, 9, 2014
3QOD
DownloadVisualize
BU of 3qod by Molmil
Crystal Structure of Heterocyst Differentiation Protein, HetR from Fischerella mv11
Descriptor: Heterocyst differentiation protein
Authors:Kim, Y, Joachimiak, G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-09
Release date:2011-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Structure of transcription factor HetR required for heterocyst differentiation in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 108, 2011
4QHP
DownloadVisualize
BU of 4qhp by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphinic dipeptide analogue LL-(R,S)-hPheP[CH2]Phe(4-CH2NH2)
Descriptor: (2R)-2-[4-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid, (2S)-2-[4-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid, Aminopeptidase N, ...
Authors:Nocek, B, Joachimiak, A.
Deposit date:2014-05-28
Release date:2014-09-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-guided, single-point modifications in the phosphinic dipeptide structure yield highly potent and selective inhibitors of neutral aminopeptidases.
J.Med.Chem., 57, 2014
2P06
DownloadVisualize
BU of 2p06 by Molmil
Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
Descriptor: GLYCEROL, Hypothetical protein AF_0060, MAGNESIUM ION
Authors:Nocek, B, Xu, X, Koniyenko, Y, Yakounine, A, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
To be Published
2BE3
DownloadVisualize
BU of 2be3 by Molmil
Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae
Descriptor: CHLORIDE ION, GLYCEROL, GTP pyrophosphokinase, ...
Authors:Cuff, M.E, Hatzos, C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-10-21
Release date:2005-12-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae
To be Published
4RI0
DownloadVisualize
BU of 4ri0 by Molmil
Serine Protease HtrA3, mutationally inactivated
Descriptor: PHOSPHATE ION, Serine protease HTRA3
Authors:Osipiuk, J, Glaza, P, Wenta, T, Lipinska, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-03
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.272 Å)
Cite:Structural and Functional Analysis of Human HtrA3 Protease and Its Subdomains.
Plos One, 10, 2015
3QOE
DownloadVisualize
BU of 3qoe by Molmil
Crystal Structure of Heterocyst Differentiation Protein, HetR from Fischerella mv11
Descriptor: Heterocyst differentiation protein
Authors:Kim, Y, Joachimiak, G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-09
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Structure of transcription factor HetR required for heterocyst differentiation in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 108, 2011
2ARK
DownloadVisualize
BU of 2ark by Molmil
Structure of a flavodoxin from Aquifex aeolicus
Descriptor: Flavodoxin, GLYCEROL, PHOSPHATE ION
Authors:Cuff, M.E, Quartey, P, Zhou, M, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-19
Release date:2005-10-25
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a flavodoxin from Aquifex aeolicus
To be Published
2AZ4
DownloadVisualize
BU of 2az4 by Molmil
Crystal Structure of a Protein of Unknown Function from Enterococcus faecalis V583
Descriptor: ZINC ION, hypothetical protein EF2904
Authors:Zhang, R, Maltseva, N, Moy, S, Collart, F, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-09-09
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 A crystal structure of a hypothetical protein from Enterococcus faecalis V583
To be Published
2AMF
DownloadVisualize
BU of 2amf by Molmil
Crystal structure of 1-Pyrroline-5-Carboxylate Reductase from Human Pathogen Streptococcus Pyogenes
Descriptor: 1-Pyrroline-5-Carboxylate reductase, PROLINE, SODIUM ION
Authors:Nocek, B, Lezondra, L, Holzle, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-09
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Delta(1)-Pyrroline-5-carboxylate Reductase from Human Pathogens Neisseria meningitides and Streptococcus pyogenes
J.Mol.Biol., 354, 2005

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon