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8BE2
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BU of 8be2 by Molmil
Crystal structure of SOS1-Nanobody77
Descriptor: Nanobody 77, SULFATE ION, Son of sevenless homolog 1
Authors:Fischer, B, Wohlkonig, A, Steyaert, J.
Deposit date:2022-10-21
Release date:2023-11-01
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.897935 Å)
Cite:Allosteric nanobodies to study the interactions between SOS1 and RAS.
Nat Commun, 15, 2024
7BMH
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BU of 7bmh by Molmil
Crystal structure of a light-driven proton pump LR (Mac) from Leptosphaeria maculans
Descriptor: EICOSANE, OLEIC ACID, Opsin
Authors:Kovalev, K, Zabelskii, D, Dmitrieva, N, Volkov, O, Shevchenko, V, Astashkin, R, Zinovev, E, Gordeliy, V.
Deposit date:2021-01-20
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based insights into evolution of rhodopsins.
Commun Biol, 4, 2021
6RF5
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BU of 6rf5 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the monomeric form, pH 6.0
Descriptor: EICOSANE, GLYCEROL, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF6
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BU of 6rf6 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the monomeric form, pH 8.0
Descriptor: EICOSANE, RETINAL, SODIUM ION, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RFA
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BU of 6rfa by Molmil
Crystal structure of the H30K mutant of the light-driven sodium pump KR2 in the monomeric form, pH 8.0
Descriptor: EICOSANE, GLYCEROL, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6REZ
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BU of 6rez by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric form, pH 5.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF7
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BU of 6rf7 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the monomeric form, pH 8.9
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RFB
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BU of 6rfb by Molmil
Crystal structure of the potassium-pumping S254A mutant of the light-driven sodium pump KR2 in the monomeric form, pH 4.3
Descriptor: EICOSANE, GLYCEROL, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF1
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BU of 6rf1 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric "wet" form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF9
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BU of 6rf9 by Molmil
Crystal structure of the Y154F mutant of the light-driven sodium pump KR2 in the monomeric form, pH 8.0
Descriptor: EICOSANE, GLYCEROL, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF4
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BU of 6rf4 by Molmil
Crystal structure of the potassium-pumping S254A mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF3
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BU of 6rf3 by Molmil
Crystal structure of the potassium-pumping G263F mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, SODIUM ION, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6REX
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BU of 6rex by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric form, pH 6.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RFC
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BU of 6rfc by Molmil
Crystal structure of the potassium-pumping G263F mutant of the light-driven sodium pump KR2 in the monomeric form, pH 4.3
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, GLYCEROL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6RF0
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BU of 6rf0 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric "dry" form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Polovinkin, V, Gushchin, I, Borshchevskiy, V, Gordeliy, V.
Deposit date:2019-04-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and mechanisms of sodium-pumping KR2 rhodopsin.
Sci Adv, 5, 2019
6YT4
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BU of 6yt4 by Molmil
Crystal structure of the N112A mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Maliar, N, Astashkin, R, Gordeliy, V.
Deposit date:2020-04-23
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the N112A Mutant of the Light-Driven Sodium Pump KR2
Crystals, 2020
5FV1
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BU of 5fv1 by Molmil
Crystal structure of hVEGF in complex with VK domain antibody
Descriptor: VASCULAR ENDOTHELIAL GROWTH FACTOR A, VK DOMAIN ANTIBODY
Authors:Chung, C, Walker, A.
Deposit date:2016-02-02
Release date:2016-02-17
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Novel Interaction Mechanism of a Domain Antibody Based Inhibitor of Human Vascular Endothelial Growth Factor with Greater Potency Than Ranibizumab and Bevacizumab and Improved Capacity Over Aflibercept.
J.Biol.Chem., 291, 2016
6T33
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BU of 6t33 by Molmil
The unusual structure of Ruminococcin C1 antimicrobial peptide confers activity against clinical pathogens
Descriptor: Ruminococcin C
Authors:Chiumento, S, Roblin, C, Bornet, O, Nouailler, M, Muller, C, Basset, C, Kieffer-Jaquinod, S, Coute, Y, Torelli, S, Le Pape, L, Shunemann, V, Jeannot, K, Nicoletti, C, Iranzo, O, Maresca, M, Giardina, T, Fons, M, Devillard, E, Perrier, J, Atta, M, Guerlesquin, F, Lafond, M, Duarte, V.
Deposit date:2019-10-10
Release date:2020-08-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The unusual structure of Ruminococcin C1 antimicrobial peptide confers clinical properties.
Proc.Natl.Acad.Sci.USA, 117, 2020
5FV2
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BU of 5fv2 by Molmil
Crystal structure of hVEGF in complex with VH domain antibody
Descriptor: VASCULAR ENDOTHELIAL GROWTH FACTOR, VH DOMAIN ANTIBODY
Authors:Chung, C, Batuwangala, T.
Deposit date:2016-02-02
Release date:2016-02-17
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Novel Interaction Mechanism of a Domain Antibody Based Inhibitor of Human Vascular Endothelial Growth Factor with Greater Potency Than Ranibizumab and Bevacizumab and Improved Capacity Over Aflibercept.
J.Biol.Chem., 291, 2016
7AUE
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BU of 7aue by Molmil
Melanocortin receptor 4 (MC4R) Gs protein complex
Descriptor: AMINOSERINE, CALCIUM ION, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Degtjarik, O, Israeli, H, Prabahar, V, Shalev-Benami, M.
Deposit date:2020-11-02
Release date:2021-04-28
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure reveals the activation mechanism of the MC4 receptor to initiate satiation signaling.
Science, 372, 2021
3ZVX
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BU of 3zvx by Molmil
STRUCTURE OF THE LECTIN FROM PLATYPODIUM ELEGANS IN COMPLEX WITH A TRIMANNOSIDE
Descriptor: CALCIUM ION, GLYCEROL, LECTIN, ...
Authors:Benevides, R.G, Ganne, G, Unverzagt, C, Cavada, B.S, Breton, C, Varrot, A, Imberty, A.
Deposit date:2011-07-28
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Lectin from Platypodium Elegans with Unusual Specificity and Affinity for Asymmetric Complex N-Glycans.
J.Biol.Chem., 287, 2012
3ZYR
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BU of 3zyr by Molmil
Structure of the lectin from Platypodium elegans in complex with heptasaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASPARAGINE, CALCIUM ION, ...
Authors:Benevides, R.G, Ganne, G, Cavazza, B.S, Varrot, A, Imberty, A.
Deposit date:2011-08-24
Release date:2012-01-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Lectin from Platypodium Elegans with Unusual Specificity and Affinity for Asymmetric Complex N-Glycans.
J.Biol.Chem., 287, 2012
8GL9
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BU of 8gl9 by Molmil
Co-crystal structure of caPCNA bound to AOH1160 derivative 1LE
Descriptor: CHLORIDE ION, N~2~-(naphthalene-1-carbonyl)-N-(2-phenoxyphenyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Kenjic, N, Malkas, L.H, Hickey, R.J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
8GLA
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BU of 8gla by Molmil
Co-crystal structure of caPCNA bound to the AOH1996 derivative, AOH1996-1LE
Descriptor: CHLORIDE ION, N-[2-(3-methoxyphenoxy)phenyl]-N~2~-(naphthalene-1-carbonyl)-L-alpha-glutamine, Proliferating cell nuclear antigen
Authors:Jossart, J, Perry, J.J.
Deposit date:2023-03-21
Release date:2023-07-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Small molecule targeting of transcription-replication conflict for selective chemotherapy.
Cell Chem Biol, 30, 2023
8W2L
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BU of 8w2l by Molmil
TRPM7 structure in complex with anticancer agent CCT128930 in closed state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, 4-(4-chlorobenzyl)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-4-aminium, ...
Authors:Nadezhdin, K.D, Sobolevsky, A.I.
Deposit date:2024-02-20
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Structural basis of selective TRPM7 inhibition by the anticancer agent CCT128930.
Cell Rep, 43, 2024

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PDB entries from 2024-08-14

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