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6DBO
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BU of 6dbo by Molmil
Cryo-EM structure of RAG in complex with 12-RSS and 23-RSS substrate DNAs
Descriptor: CALCIUM ION, Forward strand of substrate RSS DNA, Recombination activating gene 1 - MBP chimera, ...
Authors:Wu, H, Liao, M, Ru, H, Mi, W.
Deposit date:2018-05-03
Release date:2018-08-01
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:DNA melting initiates the RAG catalytic pathway.
Nat. Struct. Mol. Biol., 25, 2018
6E0P
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BU of 6e0p by Molmil
Cryo-EM structure of the centromeric nucleosome (Native alpha satellite DNA) in complex with a single chain antibody fragment
Descriptor: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Yadav, K.N.S, Zhou, B.-R.
Deposit date:2018-07-06
Release date:2019-05-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment.
Nat Commun, 10, 2019
6DZT
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BU of 6dzt by Molmil
Cryo-EM structure of nucleosome in complex with a single chain antibody fragment
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Yadav, K.N.S, Zhou, B.-R.
Deposit date:2018-07-05
Release date:2019-05-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment.
Nat Commun, 10, 2019
6E0C
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BU of 6e0c by Molmil
Cryo-EM structure of the CENP-A nucleosome (W601) in complex with a single chain antibody fragment
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Yadav, K.N.S, Zhou, B.-R.
Deposit date:2018-07-06
Release date:2019-05-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment.
Nat Commun, 10, 2019
7FJM
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BU of 7fjm by Molmil
Cryo EM structure of lysosomal ATPase
Descriptor: Polyamine-transporting ATPase 13A2
Authors:Zhang, S.S.
Deposit date:2021-08-04
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures and transport mechanism of human P5B type ATPase ATP13A2.
Cell Discov, 7, 2021
5L7H
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BU of 5l7h by Molmil
MCR IN COMPLEX WITH ligand
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 3-methyl-5,8-dioxa-17lambda-thia-4,18-diazatetracyclo[18.2.2.1,.0]pentacosa-1(22),2(6),3,9,11,13(25),20,23-octaene-17,17-dione, Mineralocorticoid receptor, ...
Authors:Xue, Y, Aagaard, A, Backstrom, S, Edman, K.
Deposit date:2016-06-03
Release date:2016-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure-Based Drug Design of Mineralocorticoid Receptor Antagonists to Explore Oxosteroid Receptor Selectivity.
ChemMedChem, 12, 2017
5L7E
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BU of 5l7e by Molmil
MCR IN COMPLEX WITH ligand
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Edman, K, Aagaard, A, Backstrom, S, Xue, Y.
Deposit date:2016-06-03
Release date:2016-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-Based Drug Design of Mineralocorticoid Receptor Antagonists to Explore Oxosteroid Receptor Selectivity.
ChemMedChem, 12, 2017
5YE4
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BU of 5ye4 by Molmil
Crystal structure of the complex of di-acetylated histone H4 and 1A9D7 Fab fragment
Descriptor: 1A9D7 L chain, 1A9D7 VH CH1 chain, ZINC ION, ...
Authors:Matsuda, T, Ito, T, Wakamori, M, Umehara, T.
Deposit date:2017-09-15
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:JQ1 affects BRD2-dependent and independent transcription regulation without disrupting H4-hyperacetylated chromatin states.
Epigenetics, 13, 2018
5L7G
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BU of 5l7g by Molmil
MCR IN COMPLEX WITH ligand
Descriptor: 1,2-ETHANEDIOL, Mineralocorticoid receptor, NCOA1 peptide, ...
Authors:Edman, K, Aagaard, A, Backstrom, S, Xue, Y.
Deposit date:2016-06-03
Release date:2016-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure-Based Drug Design of Mineralocorticoid Receptor Antagonists to Explore Oxosteroid Receptor Selectivity.
ChemMedChem, 12, 2017
5YE3
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BU of 5ye3 by Molmil
Crystal structure of the complex of di-acetylated histone H4 and 2A7D9 Fab fragment
Descriptor: 2A7D9 L chain, 2A7D9 VH CH1 chain, di-acetylated histone H4
Authors:Matsuda, T, Ito, T, Wakamori, M, Umehara, T.
Deposit date:2017-09-15
Release date:2018-08-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:JQ1 affects BRD2-dependent and independent transcription regulation without disrupting H4-hyperacetylated chromatin states.
Epigenetics, 13, 2018
7WN0
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BU of 7wn0 by Molmil
Structure of PfENT1(Y190A) in complex with nanobody 19
Descriptor: Equilibrative nucleoside/nucleobase transporter, nanobody19
Authors:Wang, C, Deng, D, Ren, R.B, Yu, L.Y.
Deposit date:2022-01-17
Release date:2023-02-01
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1.
Nat Commun, 14, 2023
7WN1
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BU of 7wn1 by Molmil
Structure of PfNT1(Y190A) in complex with nanobody 48 and inosine
Descriptor: Equilibrative nucleoside/nucleobase transporter, INOSINE, nanobody48
Authors:Wang, C, Deng, D, Ren, R.B, Yu, L.Y.
Deposit date:2022-01-17
Release date:2023-02-01
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1.
Nat Commun, 14, 2023
7FJP
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BU of 7fjp by Molmil
Cryo EM structure of lysosomal ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Zhang, S.S.
Deposit date:2021-08-04
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures and transport mechanism of human P5B type ATPase ATP13A2.
Cell Discov, 7, 2021
7FJQ
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BU of 7fjq by Molmil
Cryo EM structure of lysosomal ATPase
Descriptor: Polyamine-transporting ATPase 13A2, SPERMINE
Authors:Zhang, S.S.
Deposit date:2021-08-04
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures and transport mechanism of human P5B type ATPase ATP13A2.
Cell Discov, 7, 2021
4L1X
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BU of 4l1x by Molmil
Crystal Structuer of Human 3-alpha Hydroxysteroid Dehydrogenase Type 3 V54L Mutant in Complex with NADP+ and Progesterone
Descriptor: Aldo-keto reductase family 1 member C2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROGESTERONE, ...
Authors:Zhang, B, Hu, X.-J, Lin, S.-X.
Deposit date:2013-06-03
Release date:2014-04-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human 3-alpha hydroxysteroid dehydrogenase type 3 (3 alpha-HSD3): The V54L mutation restricting the steroid alternative binding and enhancing the 20 alpha-HSD activity
J.Steroid Biochem.Mol.Biol., 141, 2014
8OEF
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BU of 8oef by Molmil
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6)
Descriptor: Terminal uridylyltransferase 7
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-03-10
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
6KCF
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BU of 6kcf by Molmil
Structure of Inosine 5'-monophosphate Dehydrogenase from Candidatus Liberibacter asiaticus str. psy62
Descriptor: Inosine-5'-monophosphate dehydrogenase
Authors:Nan, J, Zhang, S.R, Jiang, L.
Deposit date:2019-06-28
Release date:2019-08-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evaluation of Bronopol and Disulfiram as Potential Candidatus Liberibacter asiaticus Inosine 5'-Monophosphate Dehydrogenase Inhibitors by Using Molecular Docking and Enzyme Kinetic.
Molecules, 25, 2020
7CK1
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BU of 7ck1 by Molmil
Crystal structure of arabidopsis CESA3 catalytic domain
Descriptor: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming], MANGANESE (II) ION
Authors:Qiao, Z, Gao, Y.G.
Deposit date:2020-07-15
Release date:2021-03-17
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CK3
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BU of 7ck3 by Molmil
Crystal structure of Arabidopsis CESA3 catalytic domain
Descriptor: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming]
Authors:Qiao, Z, Gao, Y.G.
Deposit date:2020-07-15
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CK2
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BU of 7ck2 by Molmil
Crystal structure of Arabidopsis CESA3 catalytic domain with UDP-Glucose
Descriptor: Cellulose synthase A catalytic subunit 3 [UDP-forming],Cellulose synthase A catalytic subunit 3 [UDP-forming], MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Qiao, Z, Gao, Y.G.
Deposit date:2020-07-15
Release date:2021-03-17
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of Arabidopsis CESA3 catalytic domain with its substrate UDP-glucose provides insight into the mechanism of cellulose synthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
8OPP
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BU of 8opp by Molmil
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Descriptor: RNA (25-MER), Terminal uridylyltransferase 7, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-07
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8OST
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BU of 8ost by Molmil
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
Descriptor: Protein lin-28 homolog A, Terminal uridylyltransferase 4, ZINC ION, ...
Authors:Gilbert, R.J, Yi, G, Ye, M.
Deposit date:2023-04-20
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8OPS
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BU of 8ops by Molmil
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Descriptor: Protein lin-28 homolog A, RNA (71-MER) Let7g, Terminal uridylyltransferase 7, ...
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-08
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8OPT
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BU of 8opt by Molmil
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Descriptor: Protein lin-28 homolog A, RNA (53-MER), Terminal uridylyltransferase 7, ...
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-08
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
2GST
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BU of 2gst by Molmil
STRUCTURE OF THE XENOBIOTIC SUBSTRATE BINDING SITE OF A GLUTATHIONE S-TRANSFERASE AS REVEALED BY X-RAY CRYSTALLOGRAPHIC ANALYSIS OF PRODUCT COMPLEXES WITH THE DIASTEREOMERS OF 9-(S-GLUTATHIONYL)-10-HYDROXY-9, 10-DIHYDROPHENANTHRENE
Descriptor: GLUTATHIONE S-TRANSFERASE, L-gamma-glutamyl-S-[(9S,10S)-10-hydroxy-9,10-dihydrophenanthren-9-yl]-L-cysteinylglycine, SULFATE ION
Authors:Ji, X, Armstrong, R.N, Gilliland, G.L.
Deposit date:1993-06-07
Release date:1993-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of the xenobiotic substrate binding site of a glutathione S-transferase as revealed by X-ray crystallographic analysis of product complexes with the diastereomers of 9-(S-glutathionyl)-10-hydroxy-9,10-dihydrophenanthrene.
Biochemistry, 33, 1994

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PDB entries from 2024-08-28

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