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X-ray structure of WDR5delta24 bound to the Kaposi's sarcoma herpesvirus LANA win motif peptide
Descriptor:	ORF 73, WD repeat-containing protein 5
Authors:	McVey, C.E, Kaye, K.M.
Deposit date:	2020-12-21
Release date:	2021-12-08
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	MLL1 is regulated by KSHV LANA and is important for virus latency. Nucleic Acids Res., 49, 2021

7WIN

Crystal structure of BAZ2B TAM domain
Descriptor:	Bromodomain adjacent to zinc finger domain protein 2B
Authors:	Feng, Y.Y, Liu, K, Min, J.R.
Deposit date:	2022-01-04
Release date:	2022-02-02
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Crystal structure of the BAZ2B TAM domain. Heliyon, 8, 2022

3O98

Glutathionylspermidine synthetase/amidase C59A complex with ADP and Gsp
Descriptor:	ADENOSINE-5'-DIPHOSPHATE, Bifunctional glutathionylspermidine synthetase/amidase, GLUTATHIONYLSPERMIDINE, ...
Authors:	Pai, C.H, Lin, C.H, Wang, A.H.-J.
Deposit date:	2010-08-04
Release date:	2011-03-02
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Structure and mechanism of Escherichia coli glutathionylspermidine amidase belonging to the family of cysteine; histidine-dependent amidohydrolases/peptidases Protein Sci., 20, 2011

7Y09

Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ...
Authors:	Shen, H, Ji, C, Xiao, J.
Deposit date:	2022-06-03
Release date:	2023-03-29
Last modified:	2024-05-08
Method:	ELECTRON MICROSCOPY (3.71 Å)
Cite:	Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M. Nat Commun, 14, 2023

7YG2

Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP2
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DBLMSP2, ...
Authors:	Shen, H, Ji, C, Xiao, J.
Deposit date:	2022-07-09
Release date:	2023-03-29
Last modified:	2024-05-08
Method:	ELECTRON MICROSCOPY (3.32 Å)
Cite:	Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M. Nat Commun, 14, 2023

7Y0J

Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum TM284VAR1
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Erythrocyte membrane protein 2 variant TM284var1, ...
Authors:	Ji, C, Xiao, J.
Deposit date:	2022-06-05
Release date:	2023-04-05
Last modified:	2024-05-08
Method:	ELECTRON MICROSCOPY (3.62 Å)
Cite:	Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M. Nat Commun, 14, 2023

7Y0H

Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum VAR2CSA FCR3
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Erythrocyte membrane protein 1, ...
Authors:	Ji, C, Xiao, J.
Deposit date:	2022-06-05
Release date:	2023-04-12
Last modified:	2024-05-08
Method:	ELECTRON MICROSCOPY (3.56 Å)
Cite:	Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M. Nat Commun, 14, 2023

7Y4H

AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins
Descriptor:	AcvX
Authors:	Tan, B, Zhang, L.P, Zhang, C.S.
Deposit date:	2022-06-14
Release date:	2023-05-24
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	A Widespread Glycosidase Confers Lobophorin Resistance and Host-Dependent Structural Diversity. Angew.Chem.Int.Ed.Engl., 62, 2023

3EQX

CRYSTAL STRUCTURE OF A FIC FAMILY PROTEIN (SO_4266) FROM SHEWANELLA ONEIDENSIS AT 1.6 A RESOLUTION
Descriptor:	FIC DOMAIN CONTAINING TRANSCRIPTIONAL REGULATOR, TRIETHYLENE GLYCOL
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2008-10-01
Release date:	2008-10-14
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi\|24375750) from Shewanella oneidensis MR-1 at 1.6 A resolution. Proteins, 75, 2009

2IIZ

Crystal structure of putative melanin biosynthesis protein TyrA with bound heme (NP_716371.1) from Shewanella Oneidensis at 2.30 A resolution
Descriptor:	1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Melanin biosynthesis protein TyrA, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-09-28
Release date:	2006-11-14
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Identification and structural characterization of heme binding in a novel dye-decolorizing peroxidase, TyrA. Proteins, 69, 2007

1AHC

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:	ALPHA-MOMORCHARIN
Authors:	Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:	1994-01-07
Release date:	1994-06-22
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin. Structure, 2, 1994

7FEF

Crystal structure of AtMBD6 with DNA
Descriptor:	DNA (5'-D(GPCPCPAPAP(5CM)PGPTPTPGPGPC)-3'), Methyl-CpG-binding domain-containing protein 6
Authors:	Wu, Z.B, Liu, K, Min, J.R.
Deposit date:	2021-07-19
Release date:	2021-12-29
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.39 Å)
Cite:	Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs. J.Mol.Biol., 434, 2022

7FEO

Crystal structure of AtMBD5 MBD domain
Descriptor:	Methyl-CpG-binding domain-containing protein 5, SULFATE ION
Authors:	Zhou, M.Q, Wu, Z.B, Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:	2021-07-21
Release date:	2021-12-29
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs. J.Mol.Biol., 434, 2022

1AHA

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:	ADENINE, ALPHA-MOMORCHARIN
Authors:	Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:	1994-01-07
Release date:	1994-06-22
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin. Structure, 2, 1994

1AHB

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN
Descriptor:	ALPHA-MOMORCHARIN, FORMYCIN-5'-MONOPHOSPHATE
Authors:	Ren, J, Wang, Y, Dong, Y, Stuart, D.I.
Deposit date:	1994-01-07
Release date:	1994-06-22
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	The N-glycosidase mechanism of ribosome-inactivating proteins implied by crystal structures of alpha-momorcharin. Structure, 2, 1994

7F2D

Arabidopsis thaliana protease-associated domain of vacuolar-sorting receptor 1 in complex with cruciferin 1 C-terminal pentapeptide RVAAA (pH9)
Descriptor:	Cruciferin 1 C-terminal peptide, Vacuolar-sorting receptor 1
Authors:	Lui, S.N, Wong, K.B.
Deposit date:	2021-06-10
Release date:	2022-01-12
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.45 Å)
Cite:	Structural insights into how vacuolar sorting receptors recognize the sorting determinants of seed storage proteins. Proc.Natl.Acad.Sci.USA, 119, 2022

7F2I

Arabidopsis thaliana protease-associated domain of vacuolar-sorting receptor 1 in complex with cruciferin 1 C-terminal pentapeptide RVAAA (pH6.5)
Descriptor:	Cruciferin 1 C-terminal peptide, Vacuolar-sorting receptor 1
Authors:	Lui, S.N, Wong, K.B.
Deposit date:	2021-06-11
Release date:	2022-01-12
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	Structural insights into how vacuolar sorting receptors recognize the sorting determinants of seed storage proteins. Proc.Natl.Acad.Sci.USA, 119, 2022

5MKI

Crystal structure of SmAP (LSm) protein from Methanococcus vannielii
Descriptor:	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Like-Sm ribonucleoprotein core
Authors:	Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V.
Deposit date:	2016-12-05
Release date:	2017-12-20
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (2.048 Å)
Cite:	Crystal structures and RNA-binding properties of Lsm proteins from archaea Sulfolobus acidocaldarius and Methanococcus vannielii: Similarity and difference of the U-binding mode. Biochimie, 175, 2020

5MKL

Crystal structure of SmAP (LSm) protein from Sulfolobus acidocaldarius
Descriptor:	Sm ribonucleo
Authors:	Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V.
Deposit date:	2016-12-05
Release date:	2017-12-20
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (2.086 Å)
Cite:	Crystal structures and RNA-binding properties of Lsm proteins from archaea Sulfolobus acidocaldarius and Methanococcus vannielii: Similarity and difference of the U-binding mode. Biochimie, 175, 2020

7X2P

Legionella pneumophila effector RavL
Descriptor:	Putative lipase
Authors:	Zheng, J, Lu, Z, Chen, S.
Deposit date:	2022-02-26
Release date:	2023-03-01
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.89 Å)
Cite:	Legionella pneumophila effector RavL To Be Published

5MKM

Crystal Structure of Two-Domain Laccase mutant H165F from Streptomyces griseoflavus
Descriptor:	1,2-ETHANEDIOL, COPPER (II) ION, GLYCEROL, ...
Authors:	Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:	2016-12-05
Release date:	2017-12-20
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (1.996 Å)
Cite:	Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993. Int J Mol Sci, 20, 2019

3NG7

Complex of dithionite-reduced 6-hydroxy-L-nicotine oxidase with substrate bound at active site and inhibitor at exit cavity
Descriptor:	(1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
Authors:	Kachalova, G.S, Bartunik, H.D.
Deposit date:	2010-06-11
Release date:	2011-03-16
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Crystallographic snapshots of the complete reaction cycle of nicotine degradation by an amine oxidase of the monoamine oxidase (MAO) family Proc.Natl.Acad.Sci.USA, 108, 2011

1I2A

CRYSTAL STRUCTURE OF L1 RIBOSOMAL PROTEIN FROM METHANOCOCCUS JANNASCHII WITH 1.85A RESOLUTION.
Descriptor:	50S RIBOSOMAL PROTEIN L1P, PENTANAL
Authors:	Smolinskaya, Y, Nikonov, S.V.
Deposit date:	2001-02-07
Release date:	2003-12-09
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:

1GPQ

Structure of ivy complexed with its target, HEWL
Descriptor:	INHIBITOR OF VERTEBRATE LYSOZYME, LYSOZYME C
Authors:	Abergel, C, Monchois, V, Claverie, J.-M.
Deposit date:	2001-11-08
Release date:	2003-03-11
Last modified:	2023-12-13
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structure and Evolution of the Ivy Protein Family, Unexpected Lysozyme Inhibitors in Gram-Negative Bacteria. Proc.Natl.Acad.Sci.USA, 104, 2007

8AF1

Beta-Lytic Protease from Lysobacter capsici
Descriptor:	CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:	Gabdulkhakov, A.G, Tishchenko, T.V, Kudryakova, I.V, Afoshin, A.S, Vasilyeva, N.V.
Deposit date:	2022-07-15
Release date:	2023-08-16
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.57 Å)
Cite:	Structural and Functional Characterization of beta-lytic Protease from Lysobacter capsici VKM B-2533 T. Int J Mol Sci, 23, 2022

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