Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7E0X
DownloadVisualize
BU of 7e0x by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with 4-hydroxyphenylacetic acid
Descriptor: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.Y, Yang, G.F.
Deposit date:2021-01-28
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Rational Redesign of Enzyme via the Combination of Quantum Mechanics/Molecular Mechanics, Molecular Dynamics, and Structural Biology Study.
J.Am.Chem.Soc., 143, 2021
7CJK
DownloadVisualize
BU of 7cjk by Molmil
Complex structure of AtHPPD with inhibitor Y18093
Descriptor: 3-oxidanyl-2-[3,5,6-tris(chloranyl)-4-[(4-chlorophenyl)methylamino]pyridin-2-yl]carbonyl-cyclohex-2-en-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.Y, Yang, G.F.
Deposit date:2020-07-11
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Complex structure of AtHPPD with inhibitor Y18093
To Be Published
7EZQ
DownloadVisualize
BU of 7ezq by Molmil
Complex structure of AtHPPD with inhibitor Y15832
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,5-dimethyl-3-(2-methylphenyl)quinazoline-2,4-dione, COBALT (II) ION
Authors:Lin, H.Y, Yang, G.F.
Deposit date:2021-06-01
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.886 Å)
Cite:Complex structure of AtHPPD with inhibitor Y18093
To Be Published
5X45
DownloadVisualize
BU of 5x45 by Molmil
Crystal structure of 2A protease from Human rhinovirus C15
Descriptor: ZINC ION, protease 2A
Authors:Ling, H, Yang, P, Shaw, N, Sun, Y, Wang, X.
Deposit date:2017-02-10
Release date:2018-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structural view of the 2A protease from human rhinovirus C15.
Acta Crystallogr.,Sect.F, 74, 2018
1N48
DownloadVisualize
BU of 1n48 by Molmil
Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
Descriptor: 5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2002-10-30
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
1N56
DownloadVisualize
BU of 1n56 by Molmil
Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*AP*A)-3', 5'-D(*TP*CP*AP*TP*(3DR)P*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2002-11-04
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Snapshots of replication through an abasic lesion; structural basis for base substitutions and frameshifts.
Mol.Cell, 13, 2004
1N2C
DownloadVisualize
BU of 1n2c by Molmil
NITROGENASE COMPLEX FROM AZOTOBACTER VINELANDII STABILIZED BY ADP-TETRAFLUOROALUMINATE
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Schindelin, H, Kisker, C, Rees, D.C.
Deposit date:1997-05-02
Release date:1997-11-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of ADP x AIF4(-)-stabilized nitrogenase complex and its implications for signal transduction.
Nature, 387, 1997
1MJC
DownloadVisualize
BU of 1mjc by Molmil
CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI
Descriptor: MAJOR COLD-SHOCK PROTEIN 7.4
Authors:Schindelin, H, Heinemann, U.
Deposit date:1994-03-18
Release date:1994-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of CspA, the major cold shock protein of Escherichia coli.
Proc.Natl.Acad.Sci.USA, 91, 1994
2BOS
DownloadVisualize
BU of 2bos by Molmil
A MUTANT SHIGA-LIKE TOXIN IIE BOUND TO ITS RECEPTOR
Descriptor: N-BUTANE, PROTEIN (SHIGA-LIKE TOXIN IIE B SUBUNIT), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Ling, H, Boodhoo, A, Armstrong, G.D, Clark, C.G, Brunton, J.L, Read, R.J.
Deposit date:1998-10-20
Release date:1999-10-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A mutant Shiga-like toxin IIe bound to its receptor Gb(3): structure of a group II Shiga-like toxin with altered binding specificity.
Structure Fold.Des., 8, 2000
7MY4
DownloadVisualize
BU of 7my4 by Molmil
Crystal Structure of the SPA17 Docking and Dimerization Domain from Danio rerio
Descriptor: Sperm autoantigenic protein 17
Authors:Dahlin, H.R, Zheng, N.
Deposit date:2021-05-20
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Beyond PKA: Evolutionary and structural insights that define a docking and dimerization domain superfamily.
J.Biol.Chem., 297, 2021
1S0M
DownloadVisualize
BU of 1s0m by Molmil
Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymerase
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3', ...
Authors:Ling, H, Sayer, J.M, Boudsocq, F, Plosky, B.S, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase.
Proc.Natl.Acad.Sci.USA, 101, 2004
1P9H
DownloadVisualize
BU of 1p9h by Molmil
CRYSTAL STRUCTURE OF THE COLLAGEN-BINDING DOMAIN OF YERSINIA ADHESIN YadA
Descriptor: Invasin
Authors:Nummelin, H, Merckel, M.C, Skurnik, M, Goldman, A.
Deposit date:2003-05-12
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Yersinia adhesin YadA collagen-binding domain structure is a novel left-handed parallel beta-roll.
Embo J., 23, 2004
1RYS
DownloadVisualize
BU of 1rys by Molmil
REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1RYR
DownloadVisualize
BU of 1ryr by Molmil
REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S10
DownloadVisualize
BU of 1s10 by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2004-01-05
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0N
DownloadVisualize
BU of 1s0n by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0O
DownloadVisualize
BU of 1s0o by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1Q7L
DownloadVisualize
BU of 1q7l by Molmil
Zn-binding domain of the T347G mutant of human aminoacylase-I
Descriptor: Aminoacylase-1, GLYCINE, ZINC ION
Authors:Lindner, H.A, Lunin, V.V, Alary, A, Hecker, R, Cygler, M, Menard, R.
Deposit date:2003-08-19
Release date:2004-01-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Essential roles of zinc ligation and enzyme dimerization for catalysis in the aminoacylase-1/M20 family.
J.Biol.Chem., 278, 2003
1SDR
DownloadVisualize
BU of 1sdr by Molmil
CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE
Descriptor: RNA (5'-R(*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3'), RNA (5'-R(*UP*AP*AP*GP*GP*AP*GP*GP*UP*GP*AP*U)-3')
Authors:Schindelin, H, Zhang, M, Bald, R, Fuerste, J.-P, Erdmann, V.A, Heinemann, U.
Deposit date:1994-12-11
Release date:1995-02-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of an RNA dodecamer containing the Escherichia coli Shine-Dalgarno sequence.
J.Mol.Biol., 249, 1995
1BOS
DownloadVisualize
BU of 1bos by Molmil
SHIGA-LIKE TOXIN COMPLEXED WITH ITS RECEPTOR
Descriptor: SHIGA-LIKE TOXIN I B SUBUNIT, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Ling, H, Boodhoo, A, Hazes, B, Cummings, M.D, Armstrong, G.D, Brunton, J.L, Read, R.J.
Deposit date:1998-01-13
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3.
Biochemistry, 37, 1998
1C48
DownloadVisualize
BU of 1c48 by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (G62T)
Descriptor: PROTEIN (SHIGA-LIKE TOXIN I B SUBUNIT)
Authors:Ling, H, Bast, D, Brunton, J.L, Read, R.J.
Deposit date:1999-08-11
Release date:2000-08-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1C4Q
DownloadVisualize
BU of 1c4q by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor: PROTEIN (SHIGA-LIKE TOXIN I SUBUNIT B), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Brunton, J.L, Read, R.J.
Deposit date:1999-08-31
Release date:2000-09-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
1CSQ
DownloadVisualize
BU of 1csq by Molmil
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
Descriptor: COLD SHOCK PROTEIN B(CSPB)
Authors:Schindelin, H, Heinemann, U.
Deposit date:1993-05-12
Release date:1995-05-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Universal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein.
Nature, 364, 1993
1CSP
DownloadVisualize
BU of 1csp by Molmil
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
Descriptor: COLD SHOCK PROTEIN B(CSPB)
Authors:Schindelin, H, Heinemann, U.
Deposit date:1993-05-12
Release date:1995-05-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Universal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein.
Nature, 364, 1993
1CQF
DownloadVisualize
BU of 1cqf by Molmil
THE COMPLEX OF THE MUTATED SHIGA TOXIN B SUBUNIT AND GB3 TRISACCHARIDE
Descriptor: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Bast, D, Brunton, J.L, Read, R.J.
Deposit date:1999-08-06
Release date:2000-08-07
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Complex of the Mutated Shiga Toxin B Subunit and Gb3 Trisaccharide
To be Published

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon