Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5MR7
DownloadVisualize
BU of 5mr7 by Molmil
Crystal structure of the DBD domain of human Grhl2
Descriptor: Grainyhead-like protein 2 homolog
Authors:Schuetz, A, Ming, Q, Roske, Y, Heinemann, U.
Deposit date:2016-12-21
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of gene regulation by the Grainyhead/CP2 transcription factor family.
Nucleic Acids Res., 46, 2018
2WBS
DownloadVisualize
BU of 2wbs by Molmil
Crystal structure of the zinc finger domain of Klf4 bound to its target DNA
Descriptor: 5'-D(*GP*AP*GP*GP*CP*GP*CP)-3', 5'-D(*GP*CP*GP*CP*CP*TP*CP)-3', GLYCEROL, ...
Authors:Zocher, G, Schuetz, A, Carstanjen, D, Heinemann, U.
Deposit date:2009-03-03
Release date:2010-04-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of the Klf4 DNA-Binding Domain Links to Self-Renewal and Macrophage Differentiation.
Cell.Mol.Life Sci., 68, 2011
5TJT
DownloadVisualize
BU of 5tjt by Molmil
T5 bacteriophage major capsid protein - one PB8 hexon
Descriptor: Major capsid protein
Authors:Conway, J, Huet, A.
Deposit date:2016-10-05
Release date:2017-02-22
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9 Å)
Cite:High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.
Sci Rep, 7, 2017
6P3E
DownloadVisualize
BU of 6p3e by Molmil
Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
Descriptor: Tail tube protein
Authors:Campbell, P, Duda, R.L, Nassur, J, Hendrix, R.W, Conway, J.F, Huet, A.
Deposit date:2019-05-23
Release date:2019-11-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.
J.Mol.Biol., 432, 2020
8EDU
DownloadVisualize
BU of 8edu by Molmil
Mycobacteriophage Muddy capsid
Descriptor: Capsid
Authors:Freeman, K.G, White, S.J, Huet, A, Conway, J.F.
Deposit date:2022-09-06
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability.
Structure, 31, 2023
7Z5E
DownloadVisualize
BU of 7z5e by Molmil
VP2-only capsid of MVM D263A mutant
Descriptor: Capsid protein VP1
Authors:Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
Deposit date:2022-03-09
Release date:2023-03-08
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5F
DownloadVisualize
BU of 7z5f by Molmil
VP2-only capsid of MVM D263A mutant
Descriptor: Capsid protein VP1
Authors:Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
Deposit date:2022-03-09
Release date:2023-03-08
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
7Z5D
DownloadVisualize
BU of 7z5d by Molmil
VP2-only capsid of wt MVM prototype strain p
Descriptor: Capsid protein VP1
Authors:Luque, D, Ortega-Esteban, A, Valbuena, A, Vilas, J.L, Rodriguez-Huete, A, Mateu, M.G, Caston, J.R.
Deposit date:2022-03-09
Release date:2023-03-08
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Equilibrium Dynamics of a Biomolecular Complex Analyzed at Single-amino Acid Resolution by Cryo-electron Microscopy.
J.Mol.Biol., 435, 2023
3CQV
DownloadVisualize
BU of 3cqv by Molmil
Crystal structure of Reverb beta in complex with heme
Descriptor: Nuclear receptor subfamily 1 group D member 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Xu, X, Dong, A, Pardee, K.I, Reinking, J, Krause, H, Schuetz, A, Zhang, R, Cui, H, Edwards, A, Arrowsmith, C.H, Weigelt, J, Bountra, C, Savchenko, A, Botchkarev, A, Structural Genomics Consortium (SGC)
Deposit date:2008-04-03
Release date:2008-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis of gas-responsive transcription by the human nuclear hormone receptor REV-ERBbeta.
Plos Biol., 7, 2009
3C5K
DownloadVisualize
BU of 3c5k by Molmil
Crystal structure of human HDAC6 zinc finger domain
Descriptor: Histone deacetylase 6, ZINC ION
Authors:Dong, A, Ravichandran, M, Schuetz, A, Loppnau, P, Li, Y, MacKenzie, F, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Dhe-Paganon, S, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2008-01-31
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Human HDAC6 zinc finger domain.
To be Published
2QW4
DownloadVisualize
BU of 2qw4 by Molmil
Human NR4A1 ligand-binding domain
Descriptor: Orphan nuclear receptor NR4A1
Authors:Min, J.R, Schuetz, A, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2007-08-09
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Human Nr4A1 Ligand-Binding Domain
To be Published
2B4Y
DownloadVisualize
BU of 2b4y by Molmil
Crystal Structure of Human Sirtuin homolog 5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent deacetylase sirtuin-5, ...
Authors:Min, J.R, Antoshenko, T, Dong, A, Schuetz, A, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2005-09-27
Release date:2006-02-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Human Sirtuin homolog 5 in complex with NAD
To be Published
5MPH
DownloadVisualize
BU of 5mph by Molmil
Structural Basis of Gene Regulation by the Grainyhead Transcription Factor Superfamily
Descriptor: Grainyhead-like protein 1 homolog, IODIDE ION
Authors:Ming, Q, Roske, Y, Schuetz, A, Walentin, K, Ibraimi, I, Schmidt-Ott, K.M, Heinemann, U.
Deposit date:2016-12-16
Release date:2018-01-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.337 Å)
Cite:Structural basis of gene regulation by the Grainyhead/CP2 transcription factor family.
Nucleic Acids Res., 46, 2018
5MPF
DownloadVisualize
BU of 5mpf by Molmil
Structural Basis of Gene Regulation by the Grainyhead Transcription Factor Superfamily
Descriptor: DNA (5'-D(*AP*AP*AP*AP*CP*CP*GP*GP*TP*TP*TP*T)-3'), Grainyhead-like protein 1 homolog
Authors:Ming, Q, Roske, Y, Schuetz, A, Walentin, K, Ibraimi, I, Schmidt-Ott, K.M, Heinemann, U.
Deposit date:2016-12-16
Release date:2018-01-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.918 Å)
Cite:Structural basis of gene regulation by the Grainyhead/CP2 transcription factor family.
Nucleic Acids Res., 46, 2018
5MPI
DownloadVisualize
BU of 5mpi by Molmil
Structural Basis of Gene Regulation by the Grainyhead Transcription Factor Superfamily
Descriptor: Grainyhead-like protein 1 homolog
Authors:Ming, Q, Roske, Y, Schuetz, A, Walentin, K, Ibraimi, I, Schmidt-Ott, K.M, Heinemann, U.
Deposit date:2016-12-16
Release date:2018-01-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.345 Å)
Cite:Structural basis of gene regulation by the Grainyhead/CP2 transcription factor family.
Nucleic Acids Res., 46, 2018
2OB0
DownloadVisualize
BU of 2ob0 by Molmil
Human MAK3 homolog in complex with Acetyl-CoA
Descriptor: ACETYL COENZYME *A, Human MAK3 homolog
Authors:Walker, J.R, Schuetz, S, Antoshenko, T, Wu, H, Bernstein, G, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-12-18
Release date:2006-12-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Human MAK3 homolog
To be Published
7ZIH
DownloadVisualize
BU of 7zih by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor AG-01-128
Descriptor: 8-(1~{H}-benzimidazol-2-ylmethyl)-3-ethyl-7-(phenylmethyl)purine-2,6-dione, DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Schuetz, A, Gogolin, A, Pfeifer, J, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.46890831 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
8OMI
DownloadVisualize
BU of 8omi by Molmil
Crystal structure of the inositol hexakisphosphate kinase EhIP6KA M85 variant in complex with ATP and Mg2+
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Schuetz, A, Aguirre, T, Fiedler, D.
Deposit date:2023-03-31
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:An unconventional gatekeeper mutation sensitizes inositol hexakisphosphate kinases to an allosteric inhibitor.
Elife, 12, 2023
7ZII
DownloadVisualize
BU of 7zii by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-05-193
Descriptor: 8-(5~{H}-[1,3]dioxolo[4,5-f]benzimidazol-6-ylmethyl)-7-(phenylmethyl)-3-propyl-purine-2,6-dione, FE (III) ION, GLYCEROL, ...
Authors:Schuetz, A, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6280005 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
7ZIK
DownloadVisualize
BU of 7zik by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor LP533401
Descriptor: (2~{R})-2-azanyl-3-[4-[2-azanyl-6-[(1~{R})-1-[4-chloranyl-2-(3-methylpyrazol-1-yl)phenyl]-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]phenyl]propanoic acid, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Schuetz, A, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.58925915 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
7ZIJ
DownloadVisualize
BU of 7zij by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-05-080
Descriptor: 8-(1~{H}-benzimidazol-2-ylmethyl)-3-cyclopropyl-7-(phenylmethyl)purine-2,6-dione, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Schuetz, A, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94678366 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
7ZIG
DownloadVisualize
BU of 7zig by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-05-060
Descriptor: (2~{R})-2-azanyl-5-[[2-[[3-methyl-2,6-bis(oxidanylidene)-7-(phenylmethyl)purin-8-yl]methyl]-1~{H}-benzimidazol-5-yl]amino]-5-oxidanylidene-pentanoic acid, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Schuetz, A, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.808885 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
7ZIF
DownloadVisualize
BU of 7zif by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-480
Descriptor: (2R)-2-azanyl-5-[[2-[3-methyl-2,6-bis(oxidanylidene)-7-(phenylmethyl)purin-8-yl]sulfanyl-3H-benzimidazol-5-yl]amino]-5-oxidanylidene-pentanoic acid, FE (III) ION, GLYCEROL, ...
Authors:Schuetz, A, Ziebart, N, Weise, M, Mallow, K, Pfeifer, J, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2022-04-08
Release date:2022-09-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.86859715 Å)
Cite:Structure-Based Design of Xanthine-Benzimidazole Derivatives as Novel and Potent Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 65, 2022
2NYR
DownloadVisualize
BU of 2nyr by Molmil
Crystal Structure of Human Sirtuin Homolog 5 in Complex with Suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, NAD-dependent deacetylase sirtuin-5, ZINC ION
Authors:Min, J.R, Antoshenko, T, Allali-Hassani, A, Dong, A, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-11-21
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural basis of inhibition of the human NAD+-dependent deacetylase SIRT5 by suramin.
Structure, 15, 2007
8CJL
DownloadVisualize
BU of 8cjl by Molmil
Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor TPT-004
Descriptor: 3-ethyl-8-[(2-methyl-5~{H}-imidazo[2,1-b][1,3]thiazol-6-yl)methyl]-7-(oxetan-3-ylmethyl)purine-2,6-dione, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Schuetz, A, Mallow, K, Nazare, M, Specker, E, Heinemann, U.
Deposit date:2023-02-13
Release date:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-Based Design of Xanthine-Imidazopyridines and -Imidazothiazoles as Highly Potent and In Vivo Efficacious Tryptophan Hydroxylase Inhibitors.
J.Med.Chem., 66, 2023

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon