Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5JR4
DownloadVisualize
BU of 5jr4 by Molmil
Crystal structure of FimH A27V/V163A from E. coli UTI89 bound to FimG N-terminal extension
Descriptor: CALCIUM ION, FimG N-terminal extension, GLYCEROL, ...
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2016-05-05
Release date:2017-02-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions.
Sci Adv, 3, 2017
5JQI
DownloadVisualize
BU of 5jqi by Molmil
Crystal structure of FimH A62S from E. coli UTI89 bound to FimG N-terminal extension
Descriptor: FimG N-terminal extension, GLYCEROL, Type 1 fimbiral adhesin FimH
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2016-05-05
Release date:2017-02-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.962 Å)
Cite:Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions.
Sci Adv, 3, 2017
6NCL
DownloadVisualize
BU of 6ncl by Molmil
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Descriptor: Major capsid protein, P1, P10, ...
Authors:Fang, Q, Rossmann, M.G.
Deposit date:2018-12-11
Release date:2019-01-30
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic structure of a giant virus.
Nat Commun, 10, 2019
6NK5
DownloadVisualize
BU of 6nk5 by Molmil
Electron Cryo-Microscopy Of Chikungunya VLP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein, E1 glycoprotein, ...
Authors:Basore, K, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-04
Release date:2019-05-22
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor.
Cell, 177, 2019
6NK3
DownloadVisualize
BU of 6nk3 by Molmil
Crystal structure of murine Mxra8 ectodomain
Descriptor: Matrix remodeling-associated protein 8
Authors:Fremont, D.H, Kim, A.S, Nelson, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-04
Release date:2019-05-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor.
Cell, 177, 2019
6NK7
DownloadVisualize
BU of 6nk7 by Molmil
Electron Cryo-Microscopy of Chikungunya in Complex with Mouse Mxra8 Receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein, E1 glycoprotein, ...
Authors:Basore, K, Kim, A.S, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-04
Release date:2019-05-22
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.99 Å)
Cite:Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor.
Cell, 177, 2019
6NK6
DownloadVisualize
BU of 6nk6 by Molmil
Electron Cryo-Microscopy Of Chikungunya VLP in complex with mouse Mxra8 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein, E1 glycoprotein, ...
Authors:Basore, K, Kim, A.S, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-04
Release date:2019-05-22
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.06 Å)
Cite:Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor.
Cell, 177, 2019
6OAN
DownloadVisualize
BU of 6oan by Molmil
Structure of DBP in complex with human neutralizing antibody 053054
Descriptor: Antibody 053054 single chain variable fragment, Duffy binding surface protein region II, SULFATE ION
Authors:Urusova, D, Tolia, N.H.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP.
Nat Microbiol, 4, 2019
6OAO
DownloadVisualize
BU of 6oao by Molmil
Structure of DBP in complex with human neutralizing antibody 092096
Descriptor: Antibody 092096 single chain variable fragment, Duffy binding surface protein region II, SULFATE ION
Authors:Urusova, D, Tolia, N.H.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.497 Å)
Cite:Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP.
Nat Microbiol, 4, 2019
6OTC
DownloadVisualize
BU of 6otc by Molmil
Synthetic Fab bound to Marburg virus VP35 interferon inhibitory domain
Descriptor: CHLORIDE ION, GLYCEROL, Polymerase cofactor VP35, ...
Authors:Amatya, P, Chen, G, Borek, D, Sidhu, S.S, Leung, D.W.
Deposit date:2019-05-02
Release date:2019-06-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of Marburg Virus RNA Synthesis by a Synthetic Anti-VP35 Antibody.
Acs Infect Dis., 5, 2019
6NTV
DownloadVisualize
BU of 6ntv by Molmil
SFTSV L endonuclease domain
Descriptor: RNA polymerase
Authors:Wang, W, Amarasinghe, G.K.
Deposit date:2019-01-30
Release date:2020-01-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Cap-Snatching SFTSV Endonuclease Domain Is an Antiviral Target.
Cell Rep, 30, 2020
5VR8
DownloadVisualize
BU of 5vr8 by Molmil
Human UDP-Glucose Dehydrogenase with UDP-Xylose Bound to the Co-enzyme Site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
Authors:Kadirvelraj, R, Beattie, N.R, Wood, Z.A.
Deposit date:2017-05-10
Release date:2017-07-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:The entropic force generated by intrinsically disordered segments tunes protein function.
Nature, 563, 2018
5W4X
DownloadVisualize
BU of 5w4x by Molmil
Truncated hUGDH
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, UDP-glucose 6-dehydrogenase
Authors:Sennett, N.C, Custer, G.S, Wood, Z.A.
Deposit date:2017-06-13
Release date:2017-07-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The entropic force generated by intrinsically disordered segments tunes protein function.
Nature, 563, 2018
6C6K
DownloadVisualize
BU of 6c6k by Molmil
Structural basis for preferential recognition of cap 0 RNA by a human IFIT1-IFIT3 protein complex
Descriptor: Interferon-induced protein with tetratricopeptide repeats 1, Interferon-induced protein with tetratricopeptide repeats 3, MAGNESIUM ION, ...
Authors:Amarasinghe, G.K, Leung, D.W, Johnson, B, Xu, W.
Deposit date:2018-01-18
Release date:2018-04-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Human IFIT3 Modulates IFIT1 RNA Binding Specificity and Protein Stability.
Immunity, 48, 2018
6C54
DownloadVisualize
BU of 6c54 by Molmil
Ebola nucleoprotein nucleocapsid-like assembly and the asymmetric unit
Descriptor: Nucleoprotein
Authors:Su, Z, Wu, C, Pintilie, G.D, Chiu, W, Amarasinghe, G.K, Leung, D.W.
Deposit date:2018-01-13
Release date:2018-03-07
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Electron Cryo-microscopy Structure of Ebola Virus Nucleoprotein Reveals a Mechanism for Nucleocapsid-like Assembly.
Cell, 172, 2018
2JV7
DownloadVisualize
BU of 2jv7 by Molmil
NMR Solution Structure of Histoplasma capsulatum CBP Homodimer
Descriptor: Calcium-binding protein
Authors:Beck, M.R, DeKoster, G.T, Cistola, D.P, Goldman, W.E.
Deposit date:2007-09-12
Release date:2008-09-23
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:NMR structure of a fungal virulence factor reveals structural homology with mammalian saposin B.
Mol.Microbiol., 72, 2009
6WVG
DownloadVisualize
BU of 6wvg by Molmil
human CD53
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Green fluorescent protein, ...
Authors:Yang, Y, Liu, S, Li, W.
Deposit date:2020-05-06
Release date:2020-09-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Open conformation of tetraspanins shapes interaction partner networks on cell membranes.
Embo J., 39, 2020
7SWX
DownloadVisualize
BU of 7swx by Molmil
SARS-CoV-2 Spike in complex with neutralizing Fab SARS2-57 (three down conformation)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SARS2-57 Fv heavy chain, ...
Authors:Adams, L.J, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:A protective antibody targeting the N-terminal domain of SARS-CoV-2 spike recognizes most emerging variants
To Be Published
7SWW
DownloadVisualize
BU of 7sww by Molmil
SARS-CoV-2 Spike NTD in complex with neutralizing Fab SARS2-57 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SARS2-57 Fv heavy chain, ...
Authors:Adams, L.J, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2021-11-21
Release date:2022-11-23
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:A protective antibody targeting the N-terminal domain of SARS-CoV-2 spike recognizes most emerging variants
To Be Published
7Q3N
DownloadVisualize
BU of 7q3n by Molmil
Cryo-EM of the complex between human uromodulin (UMOD)/Tamm-Horsfall protein (THP) and the FimH lectin domain from uropathogenic E. coli
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Type 1 fimbiral adhesin FimH, ...
Authors:Jovine, L, Xu, C, Stsiapanava, A, Carroni, M, Tunyasuvunakool, K, Jumper, J, Wu, B.
Deposit date:2021-10-28
Release date:2022-03-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure of the decoy module of human glycoprotein 2 and uromodulin and its interaction with bacterial adhesin FimH.
Nat.Struct.Mol.Biol., 29, 2022
7KYL
DownloadVisualize
BU of 7kyl by Molmil
Powassan virus Envelope protein DIII in complex with neutralizing Fab POWV-80
Descriptor: CHLORIDE ION, Envelope protein domain III, POWV-80 Fab heavy chain, ...
Authors:Errico, J.M, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-12-08
Release date:2021-04-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broadly neutralizing monoclonal antibodies protect against multiple tick-borne flaviviruses.
J.Exp.Med., 218, 2021
7LDK
DownloadVisualize
BU of 7ldk by Molmil
Structure of human respiratory syncytial virus nonstructural protein 2 (NS2)
Descriptor: CHLORIDE ION, D(-)-TARTARIC ACID, Non-structural protein 2
Authors:Chatterjee, S, Borek, D, Otwinowski, Z, Amarasinghe, G.K, Leung, D.W.
Deposit date:2021-01-13
Release date:2021-03-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural basis for IFN antagonism by human respiratory syncytial virus nonstructural protein 2.
Proc.Natl.Acad.Sci.USA, 118, 2021
<12

 

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon