7W5N
 
 | | The crystal structure of the reduced form of Gluconobacter oxydans WSH-004 SNDH | | Descriptor: | L-sorbosone dehydrogenase, NAD(P) dependent, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | | Authors: | Li, D, Hou, X.D, Rao, Y.J, Yin, D.J, Zhou, J.W, Chen, J. | | Deposit date: | 2021-11-30 | | Release date: | 2023-03-01 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.988 Å) | | Cite: | Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
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7W5K
 | | The C296A mutant of L-sorbosone dehydrogenase (SNDH) from Gluconobacter Oxydans WSH-004 | | Descriptor: | L-sorbosone dehydrogenase, NAD(P) dependent, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | | Authors: | Li, D, Hou, X.D, Rao, Y.J, Zhou, J.W, Chen, J. | | Deposit date: | 2021-11-30 | | Release date: | 2023-03-01 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.22 Å) | | Cite: | Structural Insight into the Catalytic Mechanisms of an L-Sorbosone Dehydrogenase.
Adv Sci, 10, 2023
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7E1Y
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7YL3
 | | Structure of hIAPP-TF-type1 | | Descriptor: | Islet amyloid polypeptide | | Authors: | Li, D, Zhang, X, Wang, Y, Zhu, P. | | Deposit date: | 2022-07-25 | | Release date: | 2022-12-28 | | Last modified: | 2024-05-08 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
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7YL0
 | | Structure of hIAPP-TF-type2 | | Descriptor: | Islet amyloid polypeptide | | Authors: | Li, D, Zhang, X, Wang, Y, Zhu, P. | | Deposit date: | 2022-07-25 | | Release date: | 2022-12-28 | | Last modified: | 2024-05-08 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
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7YL7
 | | Structure of hIAPP-TF-type3 | | Descriptor: | Islet amyloid polypeptide | | Authors: | Li, D, Zhang, X. | | Deposit date: | 2022-07-25 | | Release date: | 2022-12-28 | | Last modified: | 2024-05-08 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
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7YKW
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8Z7N
 | | Structure of HIV-1 CH119 SOSIP.664 trimer in complex with CD4 molecules | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, T-cell surface glycoprotein CD4 | | Authors: | Li, D, Wang, T. | | Deposit date: | 2024-04-20 | | Release date: | 2024-09-18 | | Last modified: | 2025-04-23 | | Method: | ELECTRON MICROSCOPY (3.58 Å) | | Cite: | Intermediate open state of CD4-bound HIV-1 env heterotrimers in asia CRFs.
Biochem.Biophys.Res.Commun., 725, 2024
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4BPD
 | | Structure determination of an integral membrane kinase | | Descriptor: | (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, DIACYLGLYCEROL KINASE, ZINC ION | | Authors: | Li, D, Boland, C, Caffrey, M. | | Deposit date: | 2013-05-24 | | Release date: | 2014-05-07 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | Cell-Free Expression and in Meso Crystallisation of an Integral Membrane Kinase for Structure Determination.
Cell.Mol.Life Sci., 71, 2014
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4D2E
 | | Crystal structure of an integral membrane kinase - v2.3 | | Descriptor: | (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, CITRATE ANION, ... | | Authors: | Li, D, Boland, C, Caffrey, M. | | Deposit date: | 2014-05-09 | | Release date: | 2014-07-23 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (2.28 Å) | | Cite: | Cell-Free Expression and in Meso Crystallisation of an Integral Membrane Kinase for Structure Determination.
Cell.Mol.Life Sci., 71, 2014
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2RI0
 | | Crystal Structure of glucosamine 6-phosphate deaminase (NagB) from S. mutans | | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glucosamine-6-phosphate deaminase, SODIUM ION | | Authors: | Li, D, Liu, C, Li, L.F, Su, X.D. | | Deposit date: | 2007-10-10 | | Release date: | 2008-03-25 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Ring-opening mechanism revealed by crystal structures of NagB and its ES intermediate complex
J.Mol.Biol., 379, 2008
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3HFA
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3HF9
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9JHX
 | | Versatile Aromatic Prenyltransferase auraA mutant-Y207A in complex with DMSPP | | Descriptor: | DIMETHYLALLYL S-THIOLODIPHOSPHATE, Versatile Aromatic Prenyltransferase auraA | | Authors: | Li, D, Zhang, Y, Wang, W, Wang, P. | | Deposit date: | 2024-09-10 | | Release date: | 2025-02-05 | | Method: | ELECTRON MICROSCOPY (2.86 Å) | | Cite: | Characterization and structural analysis of a versatile aromatic prenyltransferase for imidazole-containing diketopiperazines.
Nat Commun, 16, 2025
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3H6I
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3H6F
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3KRD
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3BR8
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5XZR
 | | The atomic structure of SHP2 E76A mutant in complex with allosteric inhibitor 9b | | Descriptor: | 4-(3-phenylphenyl)-N-(2,2,6,6-tetramethylpiperidin-4-yl)-1,3-thiazol-2-amine, Tyrosine-protein phosphatase non-receptor type 11 | | Authors: | Li, D, Xie, J, Zhu, J, Liu, C. | | Deposit date: | 2017-07-13 | | Release date: | 2017-12-13 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Allosteric Inhibitors of SHP2 with Therapeutic Potential for Cancer Treatment.
J. Med. Chem., 60, 2017
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8Y9E
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8Y9D
 | | Versatile Aromatic Prenyltransferase auraA in complex with DMAPP and cyclo-(L-Val-L-His) | | Descriptor: | (3~{S},6~{S})-3-(1~{H}-imidazol-4-ylmethyl)-6-propan-2-yl-piperazine-2,5-dione, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Versatile Aromatic Prenyltransferase auraA | | Authors: | Li, D, Zhang, Y, Wang, W, Wang, P. | | Deposit date: | 2024-02-06 | | Release date: | 2025-02-05 | | Method: | ELECTRON MICROSCOPY (2.45 Å) | | Cite: | Characterization and structural analysis of a versatile aromatic prenyltransferase for imidazole-containing diketopiperazines.
Nat Commun, 16, 2025
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8Y9G
 | | Versatile Aromatic Prenyltransferase auraA in complex with DMSPP and cyclo-(L-Val-DH-His) | | Descriptor: | (3~{Z},6~{S})-3-(1~{H}-imidazol-4-ylmethylidene)-6-propan-2-yl-piperazine-2,5-dione, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Versatile Aromatic Prenyltransferase auraA | | Authors: | Li, D, Zhang, Y, Wang, W, Wang, P. | | Deposit date: | 2024-02-06 | | Release date: | 2025-02-05 | | Method: | ELECTRON MICROSCOPY (2.67 Å) | | Cite: | Characterization and structural analysis of a versatile aromatic prenyltransferase for imidazole-containing diketopiperazines.
Nat Commun, 16, 2025
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5XSG
 | | Ultrahigh resolution structure of FUS (37-42) SYSGYS determined by MicroED | | Descriptor: | RNA-binding protein FUS | | Authors: | Luo, F, Gui, X, Zhou, H, Li, D, Li, X, Liu, C. | | Deposit date: | 2017-06-14 | | Release date: | 2018-04-04 | | Last modified: | 2024-03-27 | | Method: | ELECTRON CRYSTALLOGRAPHY (0.73 Å) | | Cite: | Atomic structures of FUS LC domain segments reveal bases for reversible amyloid fibril formation.
Nat. Struct. Mol. Biol., 25, 2018
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5XRR
 | | Crystal structure of FUS (54-59) SYSSYG | | Descriptor: | RNA-binding protein FUS, ZINC ION | | Authors: | Zhao, M, Gui, X, Li, D, Liu, C. | | Deposit date: | 2017-06-09 | | Release date: | 2018-04-04 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.503 Å) | | Cite: | Atomic structures of FUS LC domain segments reveal bases for reversible amyloid fibril formation.
Nat. Struct. Mol. Biol., 25, 2018
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5XJ6
 | | Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the glycerol 3-phosphate form | | Descriptor: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Glycerol-3-phosphate acyltransferase, PHOSPHATE ION, ... | | Authors: | Li, Z, Tang, Y, Li, D. | | Deposit date: | 2017-04-30 | | Release date: | 2017-12-06 | | Last modified: | 2024-11-06 | | Method: | X-RAY DIFFRACTION (2.37 Å) | | Cite: | Structural insights into the committed step of bacterial phospholipid biosynthesis.
Nat Commun, 8, 2017
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