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6K5H
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BU of 6k5h by Molmil
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
Descriptor: 1-O-phosphono-alpha-D-ribofuranose, URACIL, Uridine phosphorylase
Authors:Yang, C.C, Zhang, X.G.
Deposit date:2019-05-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
Sci Rep, 10, 2020
6M32
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BU of 6m32 by Molmil
Cryo-EM structure of FMO-RC complex from green sulfur bacteria
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E,19E)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaenyl]-1,3,4-trimethyl-benzene, ...
Authors:Chen, J.H, Zhang, X.
Deposit date:2020-03-02
Release date:2020-11-25
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Architecture of the photosynthetic complex from a green sulfur bacterium.
Science, 370, 2020
6K5K
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BU of 6k5k by Molmil
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
Descriptor: 2'-DEOXYURIDINE, PHOSPHATE ION, Uridine phosphorylase
Authors:Yang, C.C, Zhang, X.G.
Deposit date:2019-05-29
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Structural and catalytic analysis of two diverse uridine phosphorylases in Phytophthora capsici.
Sci Rep, 10, 2020
7DRI
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BU of 7dri by Molmil
Structure of SspE_CTD_41658
Descriptor: DUF1524 domain
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-28
Release date:2022-06-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
7DRS
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BU of 7drs by Molmil
Structure of SspE_40224
Descriptor: SspE protein
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-29
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
7DRR
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BU of 7drr by Molmil
Structure of SspE-R100A protein
Descriptor: SspE protein
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-29
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
7DK3
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BU of 7dk3 by Molmil
SARS-CoV-2 S trimer, S-open
Descriptor: Spike glycoprotein
Authors:Xu, C, Cong, Y.
Deposit date:2020-11-23
Release date:2020-12-16
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Conformational dynamics of SARS-CoV-2 trimeric spike glycoprotein in complex with receptor ACE2 revealed by cryo-EM.
Sci Adv, 7, 2021
7DWQ
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BU of 7dwq by Molmil
Photosystem I from a chlorophyll d-containing cyanobacterium Acaryochloris marina
Descriptor: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Chen, J.H, Zhang, X, Shen, J.R.
Deposit date:2021-01-17
Release date:2021-06-02
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A unique photosystem I reaction center from a chlorophyll d-containing cyanobacterium Acaryochloris marina.
J Integr Plant Biol, 63, 2021
7DCC
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BU of 7dcc by Molmil
S-3C1-F3b structure, all the three RBDs are in the up conformation and each of them associates with a 3C1 Fab
Descriptor: Spike glycoprotein, The heavy chain of 3C1 fab, The light chain of 3C1 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-24
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DDN
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BU of 7ddn by Molmil
SARS-Cov2 S protein at open state
Descriptor: Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-29
Release date:2020-11-25
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DD2
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BU of 7dd2 by Molmil
S-3C1-F2 structure, two RBDs are up and one RBD is down, the two up RBD bind with a 3C1 fab.
Descriptor: Spike glycoprotein, The heavy chain of 3C1 fab, The light chain of 3C1 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-27
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DK4
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BU of 7dk4 by Molmil
S-2H2-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 2H2 Fab.
Descriptor: Spike glycoprotein, The heavy chain of 2H2 Fab, The light chain of 2H2 Fab
Authors:Cong, Y, Wang, Y.F.
Deposit date:2020-11-23
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DF3
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BU of 7df3 by Molmil
SARS-CoV-2 S trimer, S-closed
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cong, X, Yao, C.
Deposit date:2020-11-06
Release date:2020-12-16
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Conformational dynamics of SARS-CoV-2 trimeric spike glycoprotein in complex with receptor ACE2 revealed by cryo-EM.
Sci Adv, 7, 2021
7DF4
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BU of 7df4 by Molmil
SARS-CoV-2 S-ACE2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Cong, X, Yao, C.
Deposit date:2020-11-06
Release date:2020-12-16
Last modified:2021-02-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational dynamics of SARS-CoV-2 trimeric spike glycoprotein in complex with receptor ACE2 revealed by cryo-EM.
Sci Adv, 7, 2021
7DDD
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BU of 7ddd by Molmil
SARS-Cov2 S protein at close state
Descriptor: Spike glycoprotein
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-28
Release date:2020-11-25
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DCX
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BU of 7dcx by Molmil
S-3C1-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 3C1 fab.
Descriptor: Spike glycoprotein, The heavy chain of 3C1 fab that binds with the up RBD, The light chain of 3C1 fab
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-27
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DK7
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BU of 7dk7 by Molmil
S-2H2-F3b structure, three RBDs are up and each RBD binds with a 2H2 Fab.
Descriptor: Spike glycoprotein, The heavy chain fragment of 2H2 Fab, The light chain fragment of 2H2 Fab
Authors:Cong, Y, Wang, Y.F.
Deposit date:2020-11-23
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DD8
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BU of 7dd8 by Molmil
S-3C1-F1 structure, one RBD is up and two RBDs are down, the up RBD binds with a 3C1 fab
Descriptor: Spike glycoprotein, The heavy chain of 3C1 fab, The light chain of 3C1 chain
Authors:Cong, Y, Liu, C.X.
Deposit date:2020-10-28
Release date:2020-12-02
Last modified:2021-01-27
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DK5
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BU of 7dk5 by Molmil
S-2H2-F1 structure, one RBD is up and two RBDs are down, only up RBD binds with a 2H2 Fab
Descriptor: Spike glycoprotein, The heavy chain of 2H2 Fab, The light chain of 2H2 Fab
Authors:Cong, Y, Wang, Y.F.
Deposit date:2020-11-23
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7DK6
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BU of 7dk6 by Molmil
S-2H2-F2 structure, two RBDs are up and one RBD is down, each up RBD binds with a 2H2 Fab.
Descriptor: Spike glycoprotein, The heavy chain of 2H2 Fab, The light chain of 2H2 Fab
Authors:Cong, Y, Wang, Y.F.
Deposit date:2020-11-23
Release date:2020-12-02
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Development and structural basis of a two-MAb cocktail for treating SARS-CoV-2 infections.
Nat Commun, 12, 2021
7X31
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BU of 7x31 by Molmil
solution structure of an anti-CRISPR protein
Descriptor: Anti-CRISPR protein (AcrIIC1)
Authors:Zhao, Y, Yang, F.
Deposit date:2022-02-27
Release date:2022-10-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022
7X4B
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BU of 7x4b by Molmil
Crystal Structure of An Anti-CRISPR Protein
Descriptor: Anti-CRISPR protein (AcrIIC1), SULFATE ION
Authors:Hu, J, Zhang, S, Gao, J.Y, Liu, X, Liu, J.
Deposit date:2022-03-02
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022
7XLQ
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BU of 7xlq by Molmil
Structure of human R-type voltage-gated CaV2.3-alpha2/delta1-beta1 channel complex in the ligand-free (apo) state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Gao, Y, Qiu, Y, Wei, Y, Dong, Y, Zhang, X.C, Zhao, Y.
Deposit date:2022-04-22
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular insights into the gating mechanisms of voltage-gated calcium channel Ca V 2.3.
Nat Commun, 14, 2023
7Y7M
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BU of 7y7m by Molmil
The structure of coxsackievirus A16 mature virion in complex with Fab 8C4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-06-22
Release date:2022-08-24
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022
7YRH
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BU of 7yrh by Molmil
Cryo-EM structure of compact coxsackievirus A16 empty particle in complex with a neutralizing antibody 9B5
Descriptor: Capsid protein VP1, Capsid protein VP3, Genome polyprotein, ...
Authors:Cong, Y, Liu, C.X.
Deposit date:2022-08-10
Release date:2022-09-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Molecular mechanism of antibody neutralization of coxsackievirus A16.
Nat Commun, 13, 2022

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