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2YVJ
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BU of 2yvj by Molmil
Crystal structure of the ferredoxin-ferredoxin reductase (BPHA3-BPHA4)complex
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Biphenyl dioxygenase ferredoxin subunit, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Senda, T, Senda, M.
Deposit date:2007-04-12
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
2YVF
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BU of 2yvf by Molmil
Crystal structure of ferredoxin reductase BPHA4 (hydroquinone)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, Ferredoxin reductase, ...
Authors:Senda, T, Senda, M.
Deposit date:2007-04-12
Release date:2007-10-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
3KCJ
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BU of 3kcj by Molmil
Room temperature neutron structure of apo-D-Xylose Isomerase (refined jointly with X-ray structure 3KBJ)
Descriptor: Xylose isomerase
Authors:Kovalevsky, A.Y, Langan, P.
Deposit date:2009-10-21
Release date:2010-09-29
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION
Cite:Identification of the Elusive Hydronium Ion Exchanging Roles with a Proton in an Enzyme at Lower pH Values
Angew.Chem.Int.Ed.Engl., 50, 2011
3KBJ
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BU of 3kbj by Molmil
Room temperature X-ray structure of apo-D-Xylose Isomerase
Descriptor: Xylose isomerase
Authors:Kovalevsky, A.Y, Hanson, L, Langan, P.
Deposit date:2009-10-20
Release date:2010-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of the Elusive Hydronium Ion Exchanging Roles with a Proton in an Enzyme at Lower pH Values.
Angew.Chem.Int.Ed.Engl., 50, 2011
7XLP
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BU of 7xlp by Molmil
MEK1 bound to DS03090629
Descriptor: (1~{R},3~{S})-3-[[6-[2-chloranyl-4-(4-methylpyrimidin-2-yl)oxy-phenyl]-3-methyl-1~{H}-indazol-4-yl]oxy]cyclohexan-1-amine, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Kishikawa, S, Takano, K, Ubukata, O, Hanzawa, H.
Deposit date:2022-04-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a Novel ATP-Competitive MEK Inhibitor DS03090629 that Overcomes Resistance Conferred by BRAF Overexpression in BRAF-Mutated Melanoma.
Mol.Cancer Ther., 22, 2023
7XNC
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BU of 7xnc by Molmil
MEK1 bound to DS94070624
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, Dual specificity mitogen-activated protein kinase kinase 1, ...
Authors:Kishikawa, S, Takano, K, Ubukata, O, Hanzawa, H.
Deposit date:2022-04-28
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a Novel ATP-Competitive MEK Inhibitor DS03090629 that Overcomes Resistance Conferred by BRAF Overexpression in BRAF-Mutated Melanoma.
Mol.Cancer Ther., 22, 2023
5Z5C
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BU of 5z5c by Molmil
Crystal structure of hydrogen sulfide-producing enzyme (Fn1055) from Fusobacterium nucleatum: lysine-dimethylated form
Descriptor: CHLORIDE ION, Cysteine synthase, PYRIDOXAL-5'-PHOSPHATE
Authors:Kezuka, Y, Yoshida, Y, Nonaka, T.
Deposit date:2018-01-17
Release date:2018-02-14
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural insights into the catalytic mechanism of cysteine (hydroxyl) lyase from the hydrogen sulfide-producing oral pathogen,
Biochem. J., 475, 2018
5CZL
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BU of 5czl by Molmil
Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library
Descriptor: Glucanase, PHOSPHATE ION
Authors:Scapin, S.M.N, Souza, F.H.M, Zanphorlin, L.M, Almeida, T.S, Sade, Y.B, Cardoso, A.M, Pinheiro, G.L, Murakami, M.T.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library
To Be Published
5B1S
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BU of 5b1s by Molmil
Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 2-(2-fluorophenyl)ethanamine
Descriptor: 2-(2-fluorophenyl)ethanamine, 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, Spermidine synthase, ...
Authors:Amano, Y, Tateishi, Y.
Deposit date:2015-12-17
Release date:2016-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:In silico, in vitro, X-ray crystallography, and integrated strategies for discovering spermidine synthase inhibitors for Chagas disease
Sci Rep, 7, 2017
6KD5
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BU of 6kd5 by Molmil
Crystal structure of the extracellular domain of MSPL/TMPRSS13 in complex with dec-RVKR-cmk inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DECANOYL-ARG-VAL-LYS-ARG-CHLOROMETHYLKETONE INHIBITOR, ...
Authors:Ohno, A, Maita, N, Okumura, Y, Nikawa, T.
Deposit date:2019-06-30
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of inhibitor-bound human MSPL that can activate high pathogenic avian influenza.
Life Sci Alliance, 4, 2021
7XVX
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BU of 7xvx by Molmil
Neutron crystal structure of human macrophage migration inhibitory factor
Descriptor: Macrophage migration inhibitory factor
Authors:Ezawa, T, Tamada, T, Odaka, M, Matsumura, H.
Deposit date:2022-05-25
Release date:2023-05-31
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.6 Å), X-RAY DIFFRACTION
Cite:Neutron crystal structure of human macrophage migration inhibitory factor
To Be Published
3KRD
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BU of 3krd by Molmil
Crystal Structure of Mycobacterium Tuberculosis Proteasome in complex with Fellutamide B
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, Fellutamide B, Proteasome subunit alpha, ...
Authors:Li, D, Li, H.
Deposit date:2009-11-18
Release date:2010-09-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fellutamide B is a potent inhibitor of the Mycobacterium tuberculosis proteasome.
Arch.Biochem.Biophys., 501, 2010
6KIP
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BU of 6kip by Molmil
Crystal structure of PTPRD phosphatase domain in complex with Liprin-alpha3 tandem SAM domains
Descriptor: Liprin-alpha-3, Receptor-type tyrosine-protein phosphatase delta
Authors:Wakita, M, Yamagata, A, Fukai, S.
Deposit date:2019-07-19
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:Structural insights into selective interaction between type IIa receptor protein tyrosine phosphatases and Liprin-alpha.
Nat Commun, 11, 2020
1GCU
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BU of 1gcu by Molmil
CRYSTAL STRUCTURE OF RAT BILIVERDIN REDUCTASE AT 1.4 A
Descriptor: BILIVERDIN REDUCTASE A
Authors:Kikuchi, A, Park, S.Y, Shiro, Y.
Deposit date:2000-08-08
Release date:2001-02-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of rat biliverdin reductase.
Nat.Struct.Biol., 8, 2001
1QDQ
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BU of 1qdq by Molmil
X-RAY CRYSTAL STRUCTURE OF BOVINE CATHEPSIN B-CA074 COMPLEX
Descriptor: CATHEPSIN B, [PROPYLAMINO-3-HYDROXY-BUTAN-1,4-DIONYL]-ISOLEUCYL-PROLINE
Authors:Yamamoto, A.
Deposit date:1999-07-10
Release date:2000-07-10
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Substrate specificity of bovine cathepsin B and its inhibition by CA074, based on crystal structure refinement of the complex.
J.Biochem.(Tokyo), 127, 2000
7FHT
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BU of 7fht by Molmil
Crystal structure of DYRK1A in complex with RD0448
Descriptor: (5~{Z})-5-[(3-ethynyl-4-methoxy-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Kikuchi, M, Sumida, Y, Hosoya, T, Kii, I, Umehara, T.
Deposit date:2021-07-30
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure-activity relationship for the folding intermediate-selective inhibition of DYRK1A.
Eur.J.Med.Chem., 227, 2022
1RRP
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BU of 1rrp by Molmil
STRUCTURE OF THE RAN-GPPNHP-RANBD1 COMPLEX
Descriptor: MAGNESIUM ION, NUCLEAR PORE COMPLEX PROTEIN NUP358, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Vetter, I.R, Nowak, C, Nishimoto, T, Kuhlmann, J, Wittinghofer, A.
Deposit date:1999-01-15
Release date:1999-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structure of a Ran-binding domain complexed with Ran bound to a GTP analogue: implications for nuclear transport.
Nature, 398, 1999
5Z8X
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BU of 5z8x by Molmil
Crystal structure of human LRRTM2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat transmembrane neuronal protein 2
Authors:Yamagata, A, Fukai, S.
Deposit date:2018-02-01
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction.
Nat Commun, 9, 2018
5Z8Y
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BU of 5z8y by Molmil
Crystal structure of human LRRTM2 in complex with Neurexin 1beta
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yamagata, A, Fukai, S.
Deposit date:2018-02-01
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction.
Nat Commun, 9, 2018
1QQL
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BU of 1qql by Molmil
THE CRYSTAL STRUCTURE OF FIBROBLAST GROWTH FACTOR 7/1 CHIMERA
Descriptor: FIBROBLAST GROWTH FACTOR 7/1 CHIMERA
Authors:Ye, S, Luo, Y, Pelletier, H, McKeehan, W.L.
Deposit date:1999-06-07
Release date:2000-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for interaction of FGF-1, FGF-2, and FGF-7 with different heparan sulfate motifs.
Biochemistry, 40, 2001
1QQK
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BU of 1qqk by Molmil
THE CRYSTAL STRUCTURE OF FIBROBLAST GROWTH FACTOR 7 (KERATINOCYTE GROWTH FACTOR)
Descriptor: FIBROBLAST GROWTH FACTOR 7
Authors:Ye, S, Luo, Y, Pelletier, H, McKeehan, W.L.
Deposit date:1999-06-07
Release date:2000-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for interaction of FGF-1, FGF-2, and FGF-7 with different heparan sulfate motifs.
Biochemistry, 40, 2001
5B1H
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BU of 5b1h by Molmil
Crystal structure of cystathionine beta-synthase from Lactobacillus plantarum
Descriptor: Cystathionine beta-synthase, GLYCEROL, SULFATE ION
Authors:Matoba, Y, Sugiyama, M.
Deposit date:2015-12-04
Release date:2016-12-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum
Protein Sci., 26, 2017
5BNQ
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BU of 5bnq by Molmil
Crystal structure of hRANKL-mRANK complex
Descriptor: CHLORIDE ION, PHOSPHATE ION, SODIUM ION, ...
Authors:Ren, J.
Deposit date:2015-05-26
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A RANKL mutant used as an inter-species vaccine for efficient immunotherapy of osteoporosis.
Sci Rep, 5, 2015
5B50
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BU of 5b50 by Molmil
Crystal structure of heme binding protein HmuT Y240A
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B51
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BU of 5b51 by Molmil
Crystal structure of heme binding protein HmuT R242A mutant
Descriptor: ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N, Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016

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